RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 FRZBQ92765 325 aa12.86□□□□□ -0.35
TNFRSF1B-202ENST00000489921 SMLR1H3BR10 107 aa12.85□□□□□ -0.35
TNFRSF1B-202ENST00000489921 LINC01559Q495D7 138 aa12.85□□□□□ -0.35
TNFRSF1B-202ENST00000489921 FAM162BQ5T6X4 162 aa12.85□□□□□ -0.35
TNFRSF1B-202ENST00000489921 SFRP2Q96HF1 295 aa12.85□□□□□ -0.35
TNFRSF1B-202ENST00000489921 FLG2Q5D862 2391 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1B-202ENST00000489921 A0A087WWL8 130 aa12.83□□□□□ -0.36
TNFRSF1B-202ENST00000489921 RHODO00212 210 aa12.83□□□□□ -0.36
TNFRSF1B-202ENST00000489921 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
TNFRSF1B-202ENST00000489921 OR11H4Q8NGC9 324 aa12.83□□□□□ -0.36
TNFRSF1B-202ENST00000489921 DNAJC30Q96LL9 226 aa12.83□□□□□ -0.36
TNFRSF1B-202ENST00000489921 TM2D2Q9BX73 214 aa12.83□□□□□ -0.36
TNFRSF1B-202ENST00000489921 A0A087WWC5 75 aa12.82□□□□□ -0.36
TNFRSF1B-202ENST00000489921 TMSB15BA0A087X1C1 80 aa12.82□□□□□ -0.36
TNFRSF1B-202ENST00000489921 UBE2G1P62253 170 aa12.82□□□□□ -0.36
TNFRSF1B-202ENST00000489921 FAM74A4Q5TZK3 123 aa12.82□□□□□ -0.36
TNFRSF1B-202ENST00000489921 CST9LP1Q5W188 147 aa12.82□□□□□ -0.36
TNFRSF1B-202ENST00000489921 TCEAL7Q9BRU2 100 aa12.82□□□□□ -0.36
TNFRSF1B-202ENST00000489921 TRAV8-3A0A0A6YYJ7 113 aa12.81□□□□□ -0.36
TNFRSF1B-202ENST00000489921 PAGE4O60829 102 aa12.81□□□□□ -0.36
TNFRSF1B-202ENST00000489921 RGS21Q2M5E4 152 aa12.81□□□□□ -0.36
TNFRSF1B-202ENST00000489921 NIT1Q86X76 327 aa12.81□□□□□ -0.36
TNFRSF1B-202ENST00000489921 KCNRGQ8N5I3 272 aa12.81□□□□□ -0.36
TNFRSF1B-202ENST00000489921 PHLDA3Q9Y5J5 127 aa12.81□□□□□ -0.36
TNFRSF1B-202ENST00000489921 M0R381 172 aa12.8□□□□□ -0.36
TNFRSF1B-202ENST00000489921 LECT2O14960 151 aa12.8□□□□□ -0.36
TNFRSF1B-202ENST00000489921 C1QBP02746 253 aa12.8□□□□□ -0.36
TNFRSF1B-202ENST00000489921 Q6ZSA8 131 aa12.8□□□□□ -0.36
TNFRSF1B-202ENST00000489921 MBD3L1Q8WWY6 194 aa12.8□□□□□ -0.36
TNFRSF1B-202ENST00000489921 TPT1P13693 172 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1B-202ENST00000489921 STOML3Q8TAV4 291 aa12.79□□□□□ -0.36
TNFRSF1B-202ENST00000489921 MLST8Q9BVC4 326 aa12.79□□□□□ -0.36
TNFRSF1B-202ENST00000489921 FAM229AH3BQW9 127 aa12.78□□□□□ -0.36
TNFRSF1B-202ENST00000489921 SEC11BP0C7V7 166 aa12.78□□□□□ -0.36
TNFRSF1B-202ENST00000489921 AKR1C3P42330 323 aa12.78□□□□□ -0.36
TNFRSF1B-202ENST00000489921 ZNF345Q14585 488 aa12.78□□□□□ -0.36
TNFRSF1B-202ENST00000489921 BAALCQ8WXS3 180 aa12.78□□□□□ -0.36
TNFRSF1B-202ENST00000489921 UBE2D3P61077 147 aa12.77□□□□□ -0.37
TNFRSF1B-202ENST00000489921 UBE2D2P62837 147 aa12.77□□□□□ -0.37
TNFRSF1B-202ENST00000489921 RPL19P84098 196 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1B-202ENST00000489921 TOR2AQ5JU69 321 aa12.77□□□□□ -0.37
TNFRSF1B-202ENST00000489921 ZFP82Q8N141 532 aa12.77□□□□□ -0.37
TNFRSF1B-202ENST00000489921 SFT2D1Q8WV19 159 aa12.77□□□□□ -0.37
TNFRSF1B-202ENST00000489921 TRBV10-1A0A0K0K1A3 114 aa12.76□□□□□ -0.37
TNFRSF1B-202ENST00000489921 SCO2A0A1W2PP80 73 aa12.76□□□□□ -0.37
TNFRSF1B-202ENST00000489921 KLK12Q9UKR0 248 aa12.76□□□□□ -0.37
TNFRSF1B-202ENST00000489921 TRBV7-3A0A075B6L6 115 aa12.75□□□□□ -0.37
TNFRSF1B-202ENST00000489921 OR10G8Q8NGN5 311 aa12.75□□□□□ -0.37
TNFRSF1B-202ENST00000489921 OR10AG1Q8NH19 301 aa12.75□□□□□ -0.37
TNFRSF1B-202ENST00000489921 FAM213BQ8TBF2 198 aa12.75□□□□□ -0.37
TNFRSF1B-202ENST00000489921 SSBP4Q9BWG4 385 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1B-202ENST00000489921 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1B-202ENST00000489921 A0A1B0GV50 99 aa12.74□□□□□ -0.37
TNFRSF1B-202ENST00000489921 HMSDA8MTL9 139 aa12.74□□□□□ -0.37
TNFRSF1B-202ENST00000489921 LINC01620Q4KN68 170 aa12.74□□□□□ -0.37
TNFRSF1B-202ENST00000489921 PRR27Q6MZM9 219 aa12.74□□□□□ -0.37
TNFRSF1B-202ENST00000489921 COX11Q9Y6N1 276 aa12.74□□□□□ -0.37
TNFRSF1B-202ENST00000489921 UMAD1C9J7I0 102 aa12.73□□□□□ -0.37
TNFRSF1B-202ENST00000489921 SNAI2O43623 268 aa12.73□□□□□ -0.37
TNFRSF1B-202ENST00000489921 S100A9P06702 114 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1B-202ENST00000489921 CXCL1P09341 107 aa12.73□□□□□ -0.37
TNFRSF1B-202ENST00000489921 RPL36AP83881 106 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1B-202ENST00000489921 ATRAIDQ6UW56 229 aa12.73□□□□□ -0.37
TNFRSF1B-202ENST00000489921 RPL36ALQ969Q0 106 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1B-202ENST00000489921 RAB4BP61018 213 aa12.72□□□□□ -0.37
TNFRSF1B-202ENST00000489921 BAGE2Q86Y30 109 aa12.72□□□□□ -0.37
TNFRSF1B-202ENST00000489921 NEXN-AS1Q8NBZ9 246 aa12.72□□□□□ -0.37
TNFRSF1B-202ENST00000489921 CHCHD7Q9BUK0 85 aa12.72□□□□□ -0.37
TNFRSF1B-202ENST00000489921 URGCP-MRPS24S4R325 110 aa12.72□□□□□ -0.37
TNFRSF1B-202ENST00000489921 IGKV2D-24A0A075B6R9 120 aa12.71□□□□□ -0.37
TNFRSF1B-202ENST00000489921 BCL2L11O43521 198 aa12.71□□□□□ -0.37
TNFRSF1B-202ENST00000489921 TMUB2Q71RG4 321 aa12.71□□□□□ -0.37
TNFRSF1B-202ENST00000489921 UBE2WQ96B02 151 aa12.71□□□□□ -0.37
TNFRSF1B-202ENST00000489921 TRBV6-8A0A0A6YYG3 113 aa12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 A0A0D9SG52 128 aa12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 MUC21A0A0G2JKD1 596 aa12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 MUC21A0A140T8X8 626 aa12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 OR5AL1P0C617 328 aa12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 CCL20P78556 96 aa12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 ENHOQ6UWT2 76 aa12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 RMI2Q96E14 147 aa12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 ZNF471Q9BX82 626 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 KIF25-AS1Q9Y6Z4 181 aa12.7□□□□□ -0.38
TNFRSF1B-202ENST00000489921 A0A087WX48 190 aa12.69□□□□□ -0.38
TNFRSF1B-202ENST00000489921 H2AFB1P0C5Y9 115 aa12.69□□□□□ -0.38
TNFRSF1B-202ENST00000489921 Q8N976 141 aa12.69□□□□□ -0.38
TNFRSF1B-202ENST00000489921 LRP1Q07954 4544 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1B-202ENST00000489921 ZNF56Q15929 161 aa12.68□□□□□ -0.38
TNFRSF1B-202ENST00000489921 DERL1Q9BUN8 251 aa12.68□□□□□ -0.38
TNFRSF1B-202ENST00000489921 KANTRA0A1W2PQU2 76 aa12.67□□□□□ -0.38
TNFRSF1B-202ENST00000489921 PFDN1O60925 122 aa12.67□□□□□ -0.38
TNFRSF1B-202ENST00000489921 RPL35P42766 123 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1B-202ENST00000489921 ELOBQ15370 118 aa12.67□□□□□ -0.38
TNFRSF1B-202ENST00000489921 MPV17L2Q567V2 206 aa12.67□□□□□ -0.38
TNFRSF1B-202ENST00000489921 NTM-AS1Q6ZSK4 140 aa12.67□□□□□ -0.38
TNFRSF1B-202ENST00000489921 RBFOX3A6NFN3 312 aa12.66□□□□□ -0.38
TNFRSF1B-202ENST00000489921 IGLV2-8P01709 118 aa12.66□□□□□ -0.38
TNFRSF1B-202ENST00000489921 SCXQ7RTU7 201 aa12.66□□□□□ -0.38
TNFRSF1B-202ENST00000489921 LINC00528Q8N1L1 170 aa12.66□□□□□ -0.38
TNFRSF1B-202ENST00000489921 C11orf52Q96A22 123 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms