RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 S100PP25815 95 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 SRP14P37108 136 aaKnown RBP1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 MPV17P39210 176 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 EIF2B2P49770 351 aaKnown RBP1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 FOXA3P55318 350 aaPredicted RBP1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 DSCR4P56555 118 aaPredicted RBP1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 UBE2BP63146 152 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 CDK6Q00534 326 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 PLGLB1Q02325 96 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 MIAQ16674 131 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 TMEM136Q6ZRR5 245 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 MIR17HGQ75NE6 70 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 PHF5AQ7RTV0 110 aaKnown RBP1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 LINC00305Q7Z4B0 112 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 TRAPPC6BQ86SZ2 158 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 HIST3H2BBQ8N257 126 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 OR10P1Q8NGE3 313 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 OR51A4Q8NGJ6 313 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 SMDT1Q9H4I9 107 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 BOKQ9UMX3 212 aaPredicted RBP1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 TRAPPC1Q9Y5R8 145 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 S4R3C0 116 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 CREBBPQ92793 2442 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 NACAE9PAV3 2078 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 PLCE1Q9P212 2302 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 MED13LQ71F56 2210 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 FLNAP21333 2647 aaKnown RBP1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 A0A1B0GWA3 101 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 COLCA2A8K830 154 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 ZNF727A8MUV8 499 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 GGTLC3B5MD39 225 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 DPM2O94777 84 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 IGLV7-43P04211 117 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 MUC1P15941 1255 aaPredicted RBP1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 FXYD7P58549 80 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 FXYD6P3P58550 94 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 EIF5AP63241 154 aaKnown RBP1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 AMMECR1LQ6DCA0 310 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 PATE2Q6UY27 113 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 IDO2Q6ZQW0 420 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 SIGLECL1Q8N7X8 197 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 OR4K15Q8NH41 348 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 PFN4Q8NHR9 129 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 NPCDR1Q9BY65 106 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 COA4Q9NYJ1 87 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 ANKRD17O75179 2603 aaKnown RBP1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 USF3Q68DE3 2245 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 TLN2Q9Y4G6 2542 aa1.85□□□□□ -2.11
DEPDC1-204ENST00000489862 IGHV1-58A0A0C4DH39 117 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 TRBV7-6A0A0J9YX20 115 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 A0A1B0GW54 56 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 C11orf86A6NJI1 115 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 C3orf84H3BNL1 204 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 CDC42EP2O14613 210 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 CST7O76096 145 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 NPYP01303 97 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 IGHV3-53P01767 116 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 UCHL1P09936 223 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 TSPAN19P0C672 248 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 NCS1P62166 190 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 BCL2L15Q5TBC7 163 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 GLIPR1L1Q6UWM5 242 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 Q6ZQT7 251 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 DEFB107AQ8IZN7 70 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 ZNF418Q8TF45 676 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 ARL11Q969Q4 196 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 AP1S3Q96PC3 154 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 HIST1H2BLQ99880 126 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 LAMTOR3Q9UHA4 124 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 CSPG4Q6UVK1 2322 aa1.84□□□□□ -2.11
DEPDC1-204ENST00000489862 CMYA5Q8N3K9 4069 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 F8P00451 2351 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 A0A1B0GU33 70 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 CPSF4LA6NMK7 179 aaKnown RBP1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 BBIP1A8MTZ0 92 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 DEFB108AA8MXU0 73 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 H3BMG7 143 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 K7ERU9 68 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 NPFFO15130 113 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 NDUFB3O43676 98 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 IFNGP01579 166 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 GZMBP10144 247 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 SELENOWP63302 87 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 ZNF181Q2M3W8 571 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 OCIAD2Q56VL3 154 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 ZNF880Q6PDB4 577 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 HAGHLQ6PII5 290 aaPredicted RBP1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 BPIFB6Q8NFQ5 453 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 AQP3Q92482 292 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 SCGB3A1Q96QR1 104 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 MIEN1Q9BRT3 115 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 ADAT1Q9BUB4 502 aaKnown RBP1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 R4GN34 69 aa1.84□□□□□ -2.12
DEPDC1-204ENST00000489862 FBN1P35555 2871 aaKnown RBP1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 ARID1AO14497 2285 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 NSD1Q96L73 2696 aaPredicted RBP1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 TRAV13-1A0A0B4J241 112 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 IRGMA1A4Y4 181 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 C7orf66A4D0T2 115 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 221.8 ms