RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 TYMSP04818 313 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 S100A9P06702 114 aaKnown RBP4.78□□□□□ -1.64
COL9A1-209ENST00000489861 SFTA3P0C7M3 94 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 GATA1P15976 413 aaPredicted RBP4.78□□□□□ -1.64
COL9A1-209ENST00000489861 UBE2G1P62253 170 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 WFDC2Q14508 124 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 Q6ZRU5 148 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 PRNTQ86SH4 94 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 WFDC10BQ8IUB3 73 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 FMC1Q96HJ9 113 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 ZFP30Q9Y2G7 519 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 TRAV8-1A0A0A6YYK1 113 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 IBA57-AS1B1ANH7 110 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 GGTLC3B5MD39 225 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 UMAD1C9J7I0 102 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 TEX46H3BTG2 121 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 PEX7O00628 323 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 GNRH2O43555 120 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 FHITP49789 147 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 PKIAP61925 76 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 GNG5P63218 68 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 ZNF345Q14585 488 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 ELOBQ15370 118 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 RPL7L1Q6DKI1 246 aaKnown RBP4.77□□□□□ -1.65
COL9A1-209ENST00000489861 DPPA3Q6W0C5 159 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 ZFP2Q6ZN57 461 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 ATP6V0E2Q8NHE4 81 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 GTSF1LQ9H1H1 148 aa4.77□□□□□ -1.65
COL9A1-209ENST00000489861 A0A0D9SG52 128 aa4.76□□□□□ -1.65
COL9A1-209ENST00000489861 KANTRA0A1W2PQU2 76 aa4.76□□□□□ -1.65
COL9A1-209ENST00000489861 ARPC5O15511 151 aa4.76□□□□□ -1.65
COL9A1-209ENST00000489861 PFDN1O60925 122 aa4.76□□□□□ -1.65
COL9A1-209ENST00000489861 LGALSLQ3ZCW2 172 aaPredicted RBP4.76□□□□□ -1.65
COL9A1-209ENST00000489861 EIF5AL1Q6IS14 154 aaKnown RBP4.76□□□□□ -1.65
COL9A1-209ENST00000489861 CHCHD7Q9BUK0 85 aa4.76□□□□□ -1.65
COL9A1-209ENST00000489861 IL36BQ9NZH7 164 aa4.76□□□□□ -1.65
COL9A1-209ENST00000489861 TRBV6-1A0A0K0K1D8 114 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 MAP1LC3B2A6NCE7 125 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 RNF222A6NCQ9 220 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 FAM74A7A6NL05 159 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 HMSDA8MTL9 139 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 B4DEV8 164 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 IGLV2-11P01706 119 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 C14orf177Q52M58 125 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 DNLZQ5SXM8 178 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 FAM162BQ5T6X4 162 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 CFAP126Q5VTH2 177 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 CST9LP1Q5W188 147 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 Q6ZQT7 251 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 TVP23CQ96ET8 276 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 SGK494Q96LW2 274 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 C9orf85Q96MD7 179 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 MAP1LC3BQ9GZQ8 125 aa4.75□□□□□ -1.65
COL9A1-209ENST00000489861 SCO2A0A1W2PP80 73 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 EIF3GO75821 320 aaKnown RBP eCLIP4.74□□□□□ -1.65
COL9A1-209ENST00000489861 TPT1P13693 172 aaKnown RBP4.74□□□□□ -1.65
COL9A1-209ENST00000489861 AKR1C3P42330 323 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 RAB5CP51148 216 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 UBE2G2P60604 165 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 Q0VG73 95 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 ZNF506Q5JVG8 444 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 COX8CQ7Z4L0 72 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 Q86TA4 180 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 ZFP82Q8N141 532 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 KCNRGQ8N5I3 272 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 SLC25A29Q8N8R3 303 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 OR11H4Q8NGC9 324 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 Q9HAA7 133 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 PHLDA3Q9Y5J5 127 aa4.74□□□□□ -1.65
COL9A1-209ENST00000489861 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.73□□□□□ -1.65
COL9A1-209ENST00000489861 CXCL1P09341 107 aa4.73□□□□□ -1.65
COL9A1-209ENST00000489861 ZNF80P51504 273 aaPredicted RBP4.73□□□□□ -1.65
COL9A1-209ENST00000489861 RPL36AP83881 106 aaKnown RBP4.73□□□□□ -1.65
COL9A1-209ENST00000489861 TMEM97Q5BJF2 176 aa4.73□□□□□ -1.65
COL9A1-209ENST00000489861 Q5BKY6 102 aa4.73□□□□□ -1.65
COL9A1-209ENST00000489861 Q8N976 141 aa4.73□□□□□ -1.65
COL9A1-209ENST00000489861 RPL36ALQ969Q0 106 aaKnown RBP4.73□□□□□ -1.65
COL9A1-209ENST00000489861 A0A087WX48 190 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 TRAV34A0A0B4J273 112 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 TRBV10-1A0A0K0K1A3 114 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 PGPEP1LA6NFU8 196 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 BCL2L11O43521 198 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 LTAP01374 205 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 IGHV3-30P01768 117 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 IGHV3-33P01772 117 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 CRPP02741 224 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 H2AFB1P0C5Y9 115 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 IGHV3-30-3P0DP02 117 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 IGHV3-30-5P0DP03 117 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 RNASE3P12724 160 aaKnown RBP4.72□□□□□ -1.65
COL9A1-209ENST00000489861 ZNF726P1Q15940 193 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 ZNF674Q2M3X9 581 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 FAM213BQ8TBF2 198 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 SFT2D1Q8WV19 159 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 MBD3L1Q8WWY6 194 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 LINC01600Q96MT4 127 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 ZNF471Q9BX82 626 aaPredicted RBP4.72□□□□□ -1.65
COL9A1-209ENST00000489861 PARLQ9H300 379 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 MANBALQ9NQG1 85 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms