RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 KCNS1Q96KK3 526 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 HYLS1Q96M11 299 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 C9orf85Q96MD7 179 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 MARVELD1Q9BSK0 173 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 GTSF1LQ9H1H1 148 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 TREM1Q9NP99 234 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 BATF3Q9NR55 127 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 TRAV8-6A0A0B4J262 113 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 PGPEP1LA6NFU8 196 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 FBLL1A6NHQ2 334 aaKnown RBP4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 F6UZH7 168 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 INMT-MINDY4F8WBC2 141 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 PSCAO43653 123 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 UPK1BO75841 260 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 LINC00694P0DN24 101 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 RNASE3P12724 160 aaKnown RBP4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 RPL12P30050 165 aaKnown RBP4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 PPT1P50897 306 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 GNG5P63218 68 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 FAM74A1Q5RGS3 127 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 UFSP1Q6NVU6 142 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 NHLRC2Q8NBF2 726 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 CMTM2Q8TAZ6 248 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 SCGB1C1Q8TD33 95 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 S100ZQ8WXG8 99 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 ASB13Q8WXK3 278 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 PRADC1Q9BSG0 188 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 NAGKQ9UJ70 344 aa4.18□□□□□ -1.74
PRPF40A-210ENST00000489741 SERTM2A0A1B0GWG4 89 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 TAAR5O14804 337 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 IGHV3-30P01768 117 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 IGHV3-33P01772 117 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 TCRAP04437 139 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 STAG3L2P0CL84 134 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 STAG3L3P0CL85 134 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 IGHV3-30-3P0DP02 117 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 IGHV3-30-5P0DP03 117 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 MGST1P10620 155 aaKnown RBP4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 RAB2AP61019 212 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 RHOHQ15669 191 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 ACOT6Q3I5F7 207 aaPredicted RBP4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 OR10J3Q5JRS4 329 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 ZNF506Q5JVG8 444 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 ZFP2Q6ZN57 461 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 ATP6V0E2Q8NHE4 81 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 ENKURQ8TC29 256 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 LINC00479Q96M42 142 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 SMIM3Q9BZL3 60 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 Q9HAA7 133 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 Q9UF83 564 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 PSG8Q9UQ74 426 aa4.17□□□□□ -1.74
PRPF40A-210ENST00000489741 IGHV3-73A0A0B4J1V6 119 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 IGKV3D-20A0A0C4DH25 116 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 A0A1W2PPV4 95 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 RNF222A6NCQ9 220 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 PET100P0DJ07 73 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 ARL14EPLP0DKL9 152 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 GAGE5Q13069 117 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 GAGE6Q13070 117 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 DAZ4Q86SG3 579 aaKnown RBP4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 TMEM75Q8N9X5 138 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 C5orf17Q8NAS9 161 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 OR10G9Q8NGN4 311 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 OR10G7Q8NGN6 311 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 OR2G3Q8NGZ4 309 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 SGK494Q96LW2 274 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 PARLQ9H300 379 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 DAZ3Q9NR90 486 aaKnown RBP4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 EPDR1Q9UM22 224 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 RPH3ALQ9UNE2 315 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
PRPF40A-210ENST00000489741 TRAV8-3A0A0A6YYJ7 113 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 GGTLC3B5MD39 225 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 HMGB3O15347 200 aaKnown RBP4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 GCGP01275 180 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 GCHFRP30047 84 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 SMUG1Q53HV7 270 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 DNLZQ5SXM8 178 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 COX8CQ7Z4L0 72 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 DEFB104AQ8WTQ1 72 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 NDFIP1Q9BT67 221 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 JPT2Q9H910 190 aa4.15□□□□□ -1.75
PRPF40A-210ENST00000489741 IGLV5-45A0A087WSX0 123 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 A0A087WWC5 75 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 A0A1W2PRE2 83 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 A8MWV9 139 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 SSNA1O43805 119 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 ATP6V0CP27449 155 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 CDC34P49427 236 aaPredicted RBP4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 CRIP1P50238 77 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 FGF8P55075 233 aaPredicted RBP4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 SERF2P84101 59 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 FLI1Q01543 452 aaPredicted RBP4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 SAPCD1Q5SSQ6 148 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 ATRAIDQ6UW56 229 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 NIT1Q86X76 327 aa4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 C14orf178Q8N769 122 aaPredicted RBP4.14□□□□□ -1.75
PRPF40A-210ENST00000489741 CYB561D1Q8N8Q1 229 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms