RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 LINC00587B1AMM8 73 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 APOC4-APOC2K7ER74 178 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 PITX3O75364 302 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 APOC2P02655 101 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 TFF1P04155 84 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 UBE2G1P62253 170 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 FXYD3Q14802 87 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 C9orf116Q5BN46 136 aaPredicted RBP0.82□□□□□ -2.28
NF1-213ENST00000489712 C4orf33Q8N1A6 199 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 TSKUQ8WUA8 353 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 IFI27L1Q96BM0 104 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 CGREF1Q99674 301 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 CCL19Q99731 98 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 BET1LQ9NYM9 111 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 PLXNA2O75051 1894 aa0.82□□□□□ -2.28
NF1-213ENST00000489712 KTN1Q86UP2 1357 aaKnown RBP0.82□□□□□ -2.28
NF1-213ENST00000489712 MED13Q9UHV7 2174 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 PHLPP1O60346 1717 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 ZNF518AQ6AHZ1 1483 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 FAM135AQ9P2D6 1515 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 TRAV12-3A0A0B4J271 114 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 A0A1W2PPM0 123 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 RBAKDNA6NC62 111 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 MIF4GDA9UHW6 222 aaKnown RBP0.81□□□□□ -2.28
NF1-213ENST00000489712 MCRIP1C9JLW8 97 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 S100A1P23297 94 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 S100PP25815 95 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 GNG4P50150 75 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 FXYD6P3P58550 94 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 TPPP2P59282 170 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 ZNF56Q15929 161 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 S100A7L2Q5SY68 101 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 FAM74A4Q5TZK3 123 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 DEFB132Q7Z7B7 95 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 ZGRF1Q86YA3 2104 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 SPTSSBQ8NFR3 76 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 PPP3R2Q96LZ3 170 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 SCN3BQ9NY72 215 aa0.81□□□□□ -2.28
NF1-213ENST00000489712 KMT2BQ9UMN6 2715 aaPredicted RBP0.8□□□□□ -2.28
NF1-213ENST00000489712 SNRNP200O75643 2136 aaKnown RBP0.8□□□□□ -2.28
NF1-213ENST00000489712 FOCADQ5VW36 1801 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 DLG5Q8TDM6 1919 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 CACNA1BQ00975 2339 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 TRBV10-3A0A0K0K1G6 114 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 CORTO00230 105 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 SSBP1Q04837 148 aaKnown RBP0.8□□□□□ -2.28
NF1-213ENST00000489712 KLKP1Q107X0 134 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 SPINK13Q1W4C9 94 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 Q6AWC8 147 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 MRPL54Q6P161 138 aaKnown RBP0.8□□□□□ -2.28
NF1-213ENST00000489712 C8orf59Q8N0T1 100 aaPredicted RBP0.8□□□□□ -2.28
NF1-213ENST00000489712 C5orf56Q8N8D9 126 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 LINC00208Q96KT6 92 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 TCEAL7Q9BRU2 100 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 CTTNBP2Q8WZ74 1663 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 DLEC1Q9Y238 1755 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 BLMP54132 1417 aaPredicted RBP0.8□□□□□ -2.28
NF1-213ENST00000489712 MBD5Q9P267 1494 aa0.8□□□□□ -2.28
NF1-213ENST00000489712 AKAP11Q9UKA4 1901 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 RP1L1Q8IWN7 2480 aaPredicted RBP0.79□□□□□ -2.28
NF1-213ENST00000489712 KDM6BO15054 1643 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 RREB1Q92766 1687 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 NBDYA0A0U1RRE5 68 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 LOC100130705A0A1B0GUX0 176 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 C20orf202A1L168 122 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 TNFP01375 233 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 SMIM6P0DI80 62 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 NPC2P61916 151 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 PPP3R1P63098 170 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 CATR1Q13166 79 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 C10orf99Q6UWK7 81 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 GTF2H5Q6ZYL4 71 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 SVBPQ8N300 66 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 AQP10Q96PS8 301 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 DSCR8Q96T75 97 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 TMEM14BQ9NUH8 114 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 BCL9LQ86UU0 1499 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 TET1Q8NFU7 2136 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 TECTAO75443 2155 aa0.79□□□□□ -2.28
NF1-213ENST00000489712 ZNF142P52746 1687 aaPredicted RBP0.78□□□□□ -2.28
NF1-213ENST00000489712 RIMS1Q86UR5 1692 aaKnown RBP0.78□□□□□ -2.28
NF1-213ENST00000489712 AHNAKQ09666 5890 aaKnown RBP0.78□□□□□ -2.28
NF1-213ENST00000489712 AFDNP55196 1824 aaKnown RBP0.78□□□□□ -2.28
NF1-213ENST00000489712 NCOA6Q14686 2063 aaPredicted RBP0.78□□□□□ -2.28
NF1-213ENST00000489712 CCL8P80075 99 aa0.78□□□□□ -2.28
NF1-213ENST00000489712 RBM3P98179 157 aaKnown RBP0.78□□□□□ -2.28
NF1-213ENST00000489712 C9orf153Q5TBE3 101 aa0.78□□□□□ -2.28
NF1-213ENST00000489712 ZNF818PQ6ZRF7 136 aa0.78□□□□□ -2.28
NF1-213ENST00000489712 C20orf197Q8N268 126 aa0.78□□□□□ -2.28
NF1-213ENST00000489712 COX7B2Q8TF08 81 aa0.78□□□□□ -2.28
NF1-213ENST00000489712 IER3IP1Q9Y5U9 82 aa0.78□□□□□ -2.28
NF1-213ENST00000489712 FLG2Q5D862 2391 aaPredicted RBP0.78□□□□□ -2.28
NF1-213ENST00000489712 PTPRMP28827 1452 aa0.78□□□□□ -2.28
NF1-213ENST00000489712 MYOM2P54296 1465 aa0.78□□□□□ -2.28
NF1-213ENST00000489712 IFT140Q96RY7 1462 aa0.78□□□□□ -2.28
NF1-213ENST00000489712 TRBV7-1A0A0A6YYK4 115 aa0.77□□□□□ -2.29
NF1-213ENST00000489712 FAM24AA6NFZ4 105 aa0.77□□□□□ -2.29
NF1-213ENST00000489712 CCL3L1P16619 93 aa0.77□□□□□ -2.29
NF1-213ENST00000489712 C10orf82Q8WW14 230 aa0.77□□□□□ -2.29
NF1-213ENST00000489712 LSM10Q969L4 123 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms