RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 A8MTW9 85 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 TAX1BP3O14907 124 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 RPL39LQ96EH5 51 aaKnown RBP11.11□□□□□ -0.63
COL9A1-208ENST00000489611 DUX5Q96PT3 197 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 KIR2DL4Q99706 377 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 CSTL1Q9H114 145 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 MRPL35Q9NZE8 188 aaKnown RBP11.11□□□□□ -0.63
COL9A1-208ENST00000489611 TP73-AS1Q9UF72 201 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 ZC2HC1BQ5TFG8 222 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 C2orf66Q6UXQ4 117 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 ADAMTSL5Q6ZMM2 481 aa11.11□□□□□ -0.63
COL9A1-208ENST00000489611 NOTCH2Q04721 2471 aa11.1□□□□□ -0.63
COL9A1-208ENST00000489611 AMTNQ6UX39 209 aa11.1□□□□□ -0.63
COL9A1-208ENST00000489611 CYSLTR1Q9Y271 337 aa11.1□□□□□ -0.63
COL9A1-208ENST00000489611 MUC4Q99102 2169 aa11.1□□□□□ -0.63
COL9A1-208ENST00000489611 POLR2KP53803 58 aaKnown RBP11.09□□□□□ -0.63
COL9A1-208ENST00000489611 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
COL9A1-208ENST00000489611 PIK3CD-AS1Q5SR53 167 aa11.09□□□□□ -0.63
COL9A1-208ENST00000489611 Q8N1Y9 231 aa11.09□□□□□ -0.63
COL9A1-208ENST00000489611 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
COL9A1-208ENST00000489611 TMEM160Q9NX00 188 aa11.09□□□□□ -0.63
COL9A1-208ENST00000489611 ACANP16112 2415 aa11.09□□□□□ -0.63
COL9A1-208ENST00000489611 TRBV27A0A0K0K1C4 114 aa11.09□□□□□ -0.63
COL9A1-208ENST00000489611 SUMO4Q6EEV6 95 aa11.09□□□□□ -0.63
COL9A1-208ENST00000489611 TLN2Q9Y4G6 2542 aa11.09□□□□□ -0.63
COL9A1-208ENST00000489611 BAHCC1Q9P281 2608 aa11.08□□□□□ -0.64
COL9A1-208ENST00000489611 SPINK13Q1W4C9 94 aa11.08□□□□□ -0.64
COL9A1-208ENST00000489611 PCP2Q8IVA1 136 aa11.08□□□□□ -0.64
COL9A1-208ENST00000489611 OR11H1Q8NG94 326 aa11.08□□□□□ -0.64
COL9A1-208ENST00000489611 TMEM141Q96I45 108 aa11.08□□□□□ -0.64
COL9A1-208ENST00000489611 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
COL9A1-208ENST00000489611 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
COL9A1-208ENST00000489611 MYO9AB2RTY4 2548 aa11.08□□□□□ -0.64
COL9A1-208ENST00000489611 F5H697 171 aa11.07□□□□□ -0.64
COL9A1-208ENST00000489611 H3BRM9 83 aa11.07□□□□□ -0.64
COL9A1-208ENST00000489611 VAMP3Q15836 100 aa11.07□□□□□ -0.64
COL9A1-208ENST00000489611 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
COL9A1-208ENST00000489611 ZNF256Q9Y2P7 627 aaPredicted RBP11.07□□□□□ -0.64
COL9A1-208ENST00000489611 TRAV12-2A0A075B6T6 113 aa11.07□□□□□ -0.64
COL9A1-208ENST00000489611 IGKV3-20P01619 116 aa11.07□□□□□ -0.64
COL9A1-208ENST00000489611 SLURP1P55000 103 aa11.07□□□□□ -0.64
COL9A1-208ENST00000489611 TAL2Q16559 108 aa11.07□□□□□ -0.64
COL9A1-208ENST00000489611 JMJD8Q96S16 334 aa11.07□□□□□ -0.64
COL9A1-208ENST00000489611 EDA2RQ9HAV5 297 aa11.07□□□□□ -0.64
COL9A1-208ENST00000489611 SPRY2O43597 315 aa11.06□□□□□ -0.64
COL9A1-208ENST00000489611 SCGB2A2Q13296 93 aa11.06□□□□□ -0.64
COL9A1-208ENST00000489611 PTH2Q96A98 100 aa11.06□□□□□ -0.64
COL9A1-208ENST00000489611 CLUHP3Q96NS8 147 aa11.06□□□□□ -0.64
COL9A1-208ENST00000489611 TIMM17AQ99595 171 aa11.06□□□□□ -0.64
COL9A1-208ENST00000489611 MDFICQ9P1T7 246 aa11.06□□□□□ -0.64
COL9A1-208ENST00000489611 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
COL9A1-208ENST00000489611 TRAV25A0A0B4J276 109 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 CBY3A6NI87 242 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 LY6G6DO95868 133 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 RIPPLY3P57055 190 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 RHOHQ15669 191 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 ZFP2Q6ZN57 461 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 GTSCR1Q86UQ5 136 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 DYNLRB2Q8TF09 96 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 BAALCQ8WXS3 180 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 LINC00467Q9BRT7 94 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 ANK3Q12955 4377 aaKnown RBP11.05□□□□□ -0.64
COL9A1-208ENST00000489611 IGKV2D-26A0A0A0MRZ7 120 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 SDHAF1A6NFY7 115 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 H3BMM0 161 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 CCL25O15444 150 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 CRYGDP07320 174 aa11.05□□□□□ -0.64
COL9A1-208ENST00000489611 SPAG8Q99932 426 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-208ENST00000489611 MXRA5Q9NR99 2828 aa11.04□□□□□ -0.64
COL9A1-208ENST00000489611 TRBV25-1A0A075B6N4 114 aa11.04□□□□□ -0.64
COL9A1-208ENST00000489611 A0A087WWL8 130 aa11.04□□□□□ -0.64
COL9A1-208ENST00000489611 M0QY20 66 aa11.04□□□□□ -0.64
COL9A1-208ENST00000489611 DEFB131AP59861 70 aa11.04□□□□□ -0.64
COL9A1-208ENST00000489611 ZNF876PQ49A33 203 aa11.04□□□□□ -0.64
COL9A1-208ENST00000489611 KLHL30-AS1Q8NEE0 82 aa11.04□□□□□ -0.64
COL9A1-208ENST00000489611 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
COL9A1-208ENST00000489611 ZNF56Q15929 161 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 OTOGQ6ZRI0 2925 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 OR4C5Q8NGB2 326 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 CHAC1Q9BUX1 264 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 OR11H12B2RN74 326 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 DEFB136Q30KP8 78 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 NSUN5P1Q3KNT7 163 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 KHDC1LQ5JSQ8 128 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 Q6ZSV7 163 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 TMEM61Q8N0U2 210 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 OR11H2Q8NH07 326 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 JPT2Q9H910 190 aa11.03□□□□□ -0.64
COL9A1-208ENST00000489611 DNAJC9-AS1A6NH13 148 aa11.02□□□□□ -0.65
COL9A1-208ENST00000489611 C9orf118A6NHY6 69 aa11.02□□□□□ -0.65
COL9A1-208ENST00000489611 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
COL9A1-208ENST00000489611 PMVKQ15126 192 aa11.02□□□□□ -0.65
COL9A1-208ENST00000489611 DEFB114Q30KQ6 69 aa11.02□□□□□ -0.65
COL9A1-208ENST00000489611 ESM1Q9NQ30 184 aa11.02□□□□□ -0.65
COL9A1-208ENST00000489611 TP53TG1Q9Y2A0 90 aa11.02□□□□□ -0.65
COL9A1-208ENST00000489611 PRSS29PA6NIE9 313 aa11.01□□□□□ -0.65
COL9A1-208ENST00000489611 A8MWV9 139 aa11.01□□□□□ -0.65
COL9A1-208ENST00000489611 E9PLD3 99 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms