RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TRAPPC1Q9Y5R8 145 aa10.19□□□□□ -0.78
CLDN11-209ENST00000489485 SNAI2O43623 268 aa10.19□□□□□ -0.78
CLDN11-209ENST00000489485 OR5AL1P0C617 328 aa10.19□□□□□ -0.78
CLDN11-209ENST00000489485 MAJINQ3KP22 176 aa10.19□□□□□ -0.78
CLDN11-209ENST00000489485 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
CLDN11-209ENST00000489485 SCRT2Q9NQ03 307 aa10.19□□□□□ -0.78
CLDN11-209ENST00000489485 F2Z2F3 143 aa10.18□□□□□ -0.78
CLDN11-209ENST00000489485 M0R381 172 aa10.18□□□□□ -0.78
CLDN11-209ENST00000489485 SPART-AS1P0CW21 52 aa10.18□□□□□ -0.78
CLDN11-209ENST00000489485 CTRLP40313 264 aa10.18□□□□□ -0.78
CLDN11-209ENST00000489485 DAZ2Q13117 558 aaKnown RBP10.18□□□□□ -0.78
CLDN11-209ENST00000489485 DKK2Q9UBU2 259 aa10.18□□□□□ -0.78
CLDN11-209ENST00000489485 CELA1Q9UNI1 258 aa10.18□□□□□ -0.78
CLDN11-209ENST00000489485 DEFB130BP0DP73 79 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 DEFB130AP0DP74 79 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 MED14OSP0DP75 135 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 NTF3P20783 257 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 SPANXN1Q5VSR9 72 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 DMRTA1Q5VZB9 504 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 C11orf45Q8TAV5 145 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 SPXQ9BT56 116 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 TRGV1A0A0A0MS02 117 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 LYRM9A8MSI8 78 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 DDTP30046 118 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 ZNF876PQ49A33 203 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 MRPL54Q6P161 138 aaKnown RBP10.17□□□□□ -0.78
CLDN11-209ENST00000489485 IL17DQ8TAD2 202 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 EDA2RQ9HAV5 297 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 MSRB1Q9NZV6 116 aa10.17□□□□□ -0.78
CLDN11-209ENST00000489485 A0A1B0GUT8 65 aa10.16□□□□□ -0.78
CLDN11-209ENST00000489485 TWIST1Q15672 202 aa10.16□□□□□ -0.78
CLDN11-209ENST00000489485 Q6ZTI0 123 aa10.16□□□□□ -0.78
CLDN11-209ENST00000489485 BORCS7Q96B45 105 aa10.16□□□□□ -0.78
CLDN11-209ENST00000489485 MRPL16Q9NX20 251 aaKnown RBP10.16□□□□□ -0.78
CLDN11-209ENST00000489485 TEX48A0A1B0GUV7 120 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 GAGE12BA1L429 117 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 M0R2P5 195 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 GAGE7O76087 117 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 GAGE12FP0CL80 117 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 GAGE12GP0CL81 117 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 GAGE12IP0CL82 117 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 IQCJQ1A5X6 159 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 LBHQ53QV2 105 aaPredicted RBP10.15□□□□□ -0.78
CLDN11-209ENST00000489485 CDPF1Q6NVV7 123 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 CNFNQ9BYD5 112 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 CBY1Q9Y3M2 126 aa10.15□□□□□ -0.78
CLDN11-209ENST00000489485 CAMPP49913 170 aa10.15□□□□□ -0.79
CLDN11-209ENST00000489485 DAD1P61803 113 aa10.15□□□□□ -0.79
CLDN11-209ENST00000489485 COX19Q49B96 90 aa10.15□□□□□ -0.79
CLDN11-209ENST00000489485 CHTOPQ9Y3Y2 248 aaKnown RBP10.15□□□□□ -0.79
CLDN11-209ENST00000489485 NANOS2P60321 138 aaKnown RBP10.14□□□□□ -0.79
CLDN11-209ENST00000489485 CACNG7P62955 275 aa10.14□□□□□ -0.79
CLDN11-209ENST00000489485 LGALS9BQ3B8N2 356 aa10.14□□□□□ -0.79
CLDN11-209ENST00000489485 TRGV2A0A075B6R0 118 aa10.13□□□□□ -0.79
CLDN11-209ENST00000489485 SYT8Q8NBV8 401 aa10.13□□□□□ -0.79
CLDN11-209ENST00000489485 JPT2Q9H910 190 aa10.13□□□□□ -0.79
CLDN11-209ENST00000489485 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
CLDN11-209ENST00000489485 RIGQ13278 110 aa10.13□□□□□ -0.79
CLDN11-209ENST00000489485 C12orf74Q32Q52 190 aa10.13□□□□□ -0.79
CLDN11-209ENST00000489485 WDR73Q6P4I2 378 aa10.13□□□□□ -0.79
CLDN11-209ENST00000489485 RASL10AQ92737 203 aa10.13□□□□□ -0.79
CLDN11-209ENST00000489485 NXPH4O95158 308 aa10.12□□□□□ -0.79
CLDN11-209ENST00000489485 ATP5L2Q7Z4Y8 100 aa10.12□□□□□ -0.79
CLDN11-209ENST00000489485 C14orf144Q96I85 54 aa10.12□□□□□ -0.79
CLDN11-209ENST00000489485 EVI2AP22794 236 aa10.11□□□□□ -0.79
CLDN11-209ENST00000489485 HBBP68871 147 aa10.11□□□□□ -0.79
CLDN11-209ENST00000489485 Q6ZTC4 211 aa10.11□□□□□ -0.79
CLDN11-209ENST00000489485 NACAE9PAV3 2078 aa10.11□□□□□ -0.79
CLDN11-209ENST00000489485 A0A1B0GXF2 115 aa10.1□□□□□ -0.79
CLDN11-209ENST00000489485 MT-ND6P03923 174 aa10.1□□□□□ -0.79
CLDN11-209ENST00000489485 RAB4BP61018 213 aa10.1□□□□□ -0.79
CLDN11-209ENST00000489485 LINC00612Q8N6U2 182 aa10.1□□□□□ -0.79
CLDN11-209ENST00000489485 C14orf178Q8N769 122 aaPredicted RBP10.1□□□□□ -0.79
CLDN11-209ENST00000489485 PRO1933Q9H354 126 aa10.1□□□□□ -0.79
CLDN11-209ENST00000489485 A0A087WWL8 130 aa10.1□□□□□ -0.79
CLDN11-209ENST00000489485 FAM74A4Q5TZK3 123 aa10.1□□□□□ -0.79
CLDN11-209ENST00000489485 PTH2Q96A98 100 aa10.1□□□□□ -0.79
CLDN11-209ENST00000489485 SAMD10Q9BYL1 202 aa10.1□□□□□ -0.79
CLDN11-209ENST00000489485 IGHV3-53P01767 116 aa10.09□□□□□ -0.79
CLDN11-209ENST00000489485 HTN3P15516 51 aa10.09□□□□□ -0.79
CLDN11-209ENST00000489485 AP1S3Q96PC3 154 aa10.09□□□□□ -0.79
CLDN11-209ENST00000489485 GNB1LQ9BYB4 327 aa10.09□□□□□ -0.79
CLDN11-209ENST00000489485 MRPL18Q9H0U6 180 aaKnown RBP10.09□□□□□ -0.79
CLDN11-209ENST00000489485 A0A1B0GW15 77 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 ATP5G1P05496 136 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 ESDP10768 282 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 COTL1Q14019 142 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 PIK3CD-AS1Q5SR53 167 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 SMIM15Q7Z3B0 74 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 POM121L12Q8N7R1 296 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 OR4C5Q8NGB2 326 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 WWC2-AS2Q96NR7 200 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 NDUFAF3Q9BU61 184 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 IGHV3-73A0A0B4J1V6 119 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 A8MWV9 139 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 SCGB1D1O95968 90 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 SMIM17P0DL12 118 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 PCP4P48539 62 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 CFAP126Q5VTH2 177 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 RASL11AQ6T310 242 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms