RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 FAM25GB3EWG6 89 aa0.94□□□□□ -2.26
XRN1-213ENST00000489241 FXYD6P3P58550 94 aa0.94□□□□□ -2.26
XRN1-213ENST00000489241 ELOF1P60002 83 aaKnown RBP0.94□□□□□ -2.26
XRN1-213ENST00000489241 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
XRN1-213ENST00000489241 SPTSSAQ969W0 71 aa0.94□□□□□ -2.26
XRN1-213ENST00000489241 KNTC1P50748 2209 aa0.93□□□□□ -2.26
XRN1-213ENST00000489241 C9orf116Q5BN46 136 aaPredicted RBP0.93□□□□□ -2.26
XRN1-213ENST00000489241 COA4Q9NYJ1 87 aa0.93□□□□□ -2.26
XRN1-213ENST00000489241 BET1LQ9NYM9 111 aa0.93□□□□□ -2.26
XRN1-213ENST00000489241 ZNF462Q96JM2 2506 aa0.93□□□□□ -2.26
XRN1-213ENST00000489241 ESPL1Q14674 2120 aa0.92□□□□□ -2.26
XRN1-213ENST00000489241 SPEF2Q9C093 1822 aa0.92□□□□□ -2.26
XRN1-213ENST00000489241 A0A096LNT2 108 aa0.92□□□□□ -2.26
XRN1-213ENST00000489241 PIPP12273 146 aaPredicted RBP0.92□□□□□ -2.26
XRN1-213ENST00000489241 CCL3L1P16619 93 aa0.92□□□□□ -2.26
XRN1-213ENST00000489241 UBE2G1P62253 170 aa0.92□□□□□ -2.26
XRN1-213ENST00000489241 PPP1R1CQ8WVI7 109 aa0.92□□□□□ -2.26
XRN1-213ENST00000489241 C10orf82Q8WW14 230 aa0.92□□□□□ -2.26
XRN1-213ENST00000489241 PDCD10Q9BUL8 212 aa0.92□□□□□ -2.26
XRN1-213ENST00000489241 A0A087WTM6 91 aa0.91□□□□□ -2.26
XRN1-213ENST00000489241 EFCAB10A6NFE3 127 aa0.91□□□□□ -2.26
XRN1-213ENST00000489241 NDUFB6O95139 128 aa0.91□□□□□ -2.26
XRN1-213ENST00000489241 RPL7L1Q6DKI1 246 aaKnown RBP0.91□□□□□ -2.26
XRN1-213ENST00000489241 C1orf54Q8WWF1 131 aa0.91□□□□□ -2.26
XRN1-213ENST00000489241 ZNF142P52746 1687 aaPredicted RBP0.91□□□□□ -2.26
XRN1-213ENST00000489241 FAM92AA1XBS5 289 aa0.9□□□□□ -2.27
XRN1-213ENST00000489241 A6NIN4 97 aa0.9□□□□□ -2.27
XRN1-213ENST00000489241 SNCGO76070 127 aa0.9□□□□□ -2.27
XRN1-213ENST00000489241 HIST1H1DP16402 221 aaKnown RBP0.9□□□□□ -2.27
XRN1-213ENST00000489241 C20orf197Q8N268 126 aa0.9□□□□□ -2.27
XRN1-213ENST00000489241 DSCR8Q96T75 97 aa0.9□□□□□ -2.27
XRN1-213ENST00000489241 SEC11CQ9BY50 192 aa0.9□□□□□ -2.27
XRN1-213ENST00000489241 RPRMQ9NS64 109 aa0.9□□□□□ -2.27
XRN1-213ENST00000489241 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
XRN1-213ENST00000489241 DAPK1P53355 1430 aa0.89□□□□□ -2.27
XRN1-213ENST00000489241 S100A7L2Q5SY68 101 aa0.89□□□□□ -2.27
XRN1-213ENST00000489241 RPL13AP3Q6NVV1 102 aa0.89□□□□□ -2.27
XRN1-213ENST00000489241 SNRNP25Q9BV90 132 aaKnown RBP0.89□□□□□ -2.27
XRN1-213ENST00000489241 C10orf95Q9H7T3 257 aa0.89□□□□□ -2.27
XRN1-213ENST00000489241 AKAP11Q9UKA4 1901 aa0.89□□□□□ -2.27
XRN1-213ENST00000489241 BCORL1Q5H9F3 1711 aa0.89□□□□□ -2.27
XRN1-213ENST00000489241 FOCADQ5VW36 1801 aa0.88□□□□□ -2.27
XRN1-213ENST00000489241 RBAKDNA6NC62 111 aa0.88□□□□□ -2.27
XRN1-213ENST00000489241 CBLN1P23435 193 aa0.88□□□□□ -2.27
XRN1-213ENST00000489241 SSBP1Q04837 148 aaKnown RBP0.88□□□□□ -2.27
XRN1-213ENST00000489241 C4orf33Q8N1A6 199 aa0.88□□□□□ -2.27
XRN1-213ENST00000489241 COX7B2Q8TF08 81 aa0.88□□□□□ -2.27
XRN1-213ENST00000489241 AGPAT4-IT1Q9H0P7 198 aa0.88□□□□□ -2.27
XRN1-213ENST00000489241 NOTCH1P46531 2555 aa0.88□□□□□ -2.27
XRN1-213ENST00000489241 MBD5Q9P267 1494 aa0.87□□□□□ -2.27
XRN1-213ENST00000489241 MEIG1Q5JSS6 88 aa0.87□□□□□ -2.27
XRN1-213ENST00000489241 KRTAP19-3Q7Z4W3 81 aa0.87□□□□□ -2.27
XRN1-213ENST00000489241 SPTSSBQ8NFR3 76 aa0.87□□□□□ -2.27
XRN1-213ENST00000489241 MUC22E2RYF6 1773 aaPredicted RBP0.87□□□□□ -2.27
XRN1-213ENST00000489241 ZNF469Q96JG9 3925 aaPredicted RBP0.87□□□□□ -2.27
XRN1-213ENST00000489241 KIAA0100Q14667 2235 aaKnown RBP0.87□□□□□ -2.27
XRN1-213ENST00000489241 PHLPP1O60346 1717 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 ZNF518AQ6AHZ1 1483 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 ROCK2O75116 1388 aaKnown RBP0.86□□□□□ -2.27
XRN1-213ENST00000489241 LOC100130705A0A1B0GUX0 176 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 A0A1B0GV90 55 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 IFNA17P01571 189 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 APODP05090 189 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 UBE2D1P51668 147 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.86□□□□□ -2.27
XRN1-213ENST00000489241 COPS9Q8WXC6 57 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 LSM10Q969L4 123 aaKnown RBP0.86□□□□□ -2.27
XRN1-213ENST00000489241 FAM103A1Q9BTL3 118 aaKnown RBP0.86□□□□□ -2.27
XRN1-213ENST00000489241 FBN2P35556 2912 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 ABCA1O95477 2261 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 CFTRP13569 1480 aa0.86□□□□□ -2.27
XRN1-213ENST00000489241 LAMB1P07942 1786 aa0.85□□□□□ -2.27
XRN1-213ENST00000489241 ASH1LQ9NR48 2969 aaKnown RBP0.85□□□□□ -2.27
XRN1-213ENST00000489241 CLPSL1A2RUU4 121 aa0.85□□□□□ -2.27
XRN1-213ENST00000489241 RERGLQ9H628 205 aa0.85□□□□□ -2.27
XRN1-213ENST00000489241 LOC285556D6RIA3 1793 aa0.85□□□□□ -2.27
XRN1-213ENST00000489241 PARP14Q460N5 1801 aa0.85□□□□□ -2.27
XRN1-213ENST00000489241 FAM74A4Q5TZK3 123 aa0.84□□□□□ -2.27
XRN1-213ENST00000489241 SPATA8Q6RVD6 105 aa0.84□□□□□ -2.27
XRN1-213ENST00000489241 SERP1Q9Y6X1 66 aa0.84□□□□□ -2.27
XRN1-213ENST00000489241 MED13LQ71F56 2210 aa0.84□□□□□ -2.28
XRN1-213ENST00000489241 NAIPQ13075 1403 aa0.83□□□□□ -2.28
XRN1-213ENST00000489241 DLEU1O43261 78 aa0.83□□□□□ -2.28
XRN1-213ENST00000489241 BTG2P78543 158 aa0.83□□□□□ -2.28
XRN1-213ENST00000489241 Q6AWC8 147 aa0.83□□□□□ -2.28
XRN1-213ENST00000489241 Q96NJ1 140 aa0.83□□□□□ -2.28
XRN1-213ENST00000489241 V9GYV3 84 aa0.83□□□□□ -2.28
XRN1-213ENST00000489241 ARFGEF1Q9Y6D6 1849 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 PLXNA1Q9UIW2 1896 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 MYH8P13535 1937 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 BCL9LQ86UU0 1499 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 IFT140Q96RY7 1462 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 NRXN2Q9P2S2 1712 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 TRBV10-3A0A0K0K1G6 114 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 MCRIP1C9JLW8 97 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 AKAIN1P0CW23 69 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 FGF7P21781 194 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 NAA60Q9H7X0 242 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 PHIPQ8WWQ0 1821 aa0.82□□□□□ -2.28
XRN1-213ENST00000489241 TRBV7-1A0A0A6YYK4 115 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms