RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 HRNRQ86YZ3 2850 aaPredicted RBP8.2□□□□□ -1.1
NEB-215ENST00000489048 SDHAF1A6NFY7 115 aa8.19□□□□□ -1.1
NEB-215ENST00000489048 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
NEB-215ENST00000489048 RHOHQ15669 191 aa8.19□□□□□ -1.1
NEB-215ENST00000489048 C9orf85Q96MD7 179 aa8.19□□□□□ -1.1
NEB-215ENST00000489048 MUC4Q99102 2169 aa8.19□□□□□ -1.1
NEB-215ENST00000489048 K7EMT4 169 aa8.19□□□□□ -1.1
NEB-215ENST00000489048 CRYBA4P53673 196 aa8.19□□□□□ -1.1
NEB-215ENST00000489048 UCNP55089 124 aa8.19□□□□□ -1.1
NEB-215ENST00000489048 CARD19Q96LW7 228 aa8.19□□□□□ -1.1
NEB-215ENST00000489048 DAZ1Q9NQZ3 744 aaKnown RBP8.19□□□□□ -1.1
NEB-215ENST00000489048 FHL3Q13643 280 aa8.18□□□□□ -1.1
NEB-215ENST00000489048 JPT2Q9H910 190 aa8.18□□□□□ -1.1
NEB-215ENST00000489048 TLN1Q9Y490 2541 aaKnown RBP8.18□□□□□ -1.1
NEB-215ENST00000489048 LRBAP50851 2863 aa8.18□□□□□ -1.1
NEB-215ENST00000489048 A6NDX4 124 aa8.18□□□□□ -1.1
NEB-215ENST00000489048 J3QQQ9 107 aa8.18□□□□□ -1.1
NEB-215ENST00000489048 IGLV1-40P01703 118 aa8.18□□□□□ -1.1
NEB-215ENST00000489048 ID1P41134 155 aa8.18□□□□□ -1.1
NEB-215ENST00000489048 CKS1BP61024 79 aa8.18□□□□□ -1.1
NEB-215ENST00000489048 RPL11P62913 178 aaKnown RBP8.18□□□□□ -1.1
NEB-215ENST00000489048 ZNF418Q8TF45 676 aaPredicted RBP8.18□□□□□ -1.1
NEB-215ENST00000489048 LEPROTO15243 131 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 EMP1P54849 157 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 DCANP1Q8TF63 244 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 PRO1854Q9UHT4 67 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 IGHV3-16A0A0C4DH30 117 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 TMEM223A0PJW6 202 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 A8MWV9 139 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 IGHV3-11P01762 117 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 PTPRQQ9UMZ3 2332 aa8.17□□□□□ -1.1
NEB-215ENST00000489048 GVINP1Q7Z2Y8 2422 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 A0A087WWL8 130 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 CFHR3Q02985 330 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 Q6ZUT4 128 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 A0A0B4J2C4 111 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 A0A0J9YX75 114 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 M0QY20 66 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 LGALS3P17931 250 aaKnown RBP8.16□□□□□ -1.1
NEB-215ENST00000489048 MDFICQ9P1T7 246 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 ZNF580Q9UK33 172 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 IGHV3OR16-10A0A075B7F0 116 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 PTH2Q96A98 100 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
NEB-215ENST00000489048 PF4V1P10720 104 aa8.15□□□□□ -1.1
NEB-215ENST00000489048 BRD3OSQ6XYD6 125 aa8.15□□□□□ -1.1
NEB-215ENST00000489048 TRPT1Q86TN4 253 aaKnown RBP8.15□□□□□ -1.1
NEB-215ENST00000489048 F5H697 171 aa8.15□□□□□ -1.11
NEB-215ENST00000489048 MT-ATP8P03928 68 aa8.15□□□□□ -1.11
NEB-215ENST00000489048 SPINK8P0C7L1 97 aa8.15□□□□□ -1.11
NEB-215ENST00000489048 ZNF688P0C7X2 276 aa8.15□□□□□ -1.11
NEB-215ENST00000489048 P0DMU3 169 aa8.15□□□□□ -1.11
NEB-215ENST00000489048 FAM231AP0DMU4 169 aa8.15□□□□□ -1.11
NEB-215ENST00000489048 FAM231CP0DMU5 169 aa8.15□□□□□ -1.11
NEB-215ENST00000489048 XGP55808 180 aa8.15□□□□□ -1.11
NEB-215ENST00000489048 SFTA2Q6UW10 78 aa8.15□□□□□ -1.11
NEB-215ENST00000489048 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.11
NEB-215ENST00000489048 RIF1Q5UIP0 2472 aaKnown RBP8.14□□□□□ -1.11
NEB-215ENST00000489048 IGKV3-7A0A075B6H7 116 aa8.14□□□□□ -1.11
NEB-215ENST00000489048 EIF4EBP3O60516 100 aaPredicted RBP8.14□□□□□ -1.11
NEB-215ENST00000489048 IGHV3-33P01772 117 aa8.14□□□□□ -1.11
NEB-215ENST00000489048 ZNF22P17026 224 aaPredicted RBP8.14□□□□□ -1.11
NEB-215ENST00000489048 ANKRD29Q8N6D5 301 aa8.14□□□□□ -1.11
NEB-215ENST00000489048 RNF152Q8N8N0 203 aa8.14□□□□□ -1.11
NEB-215ENST00000489048 ZNF256Q9Y2P7 627 aaPredicted RBP8.14□□□□□ -1.11
NEB-215ENST00000489048 TRAV12-3A0A0B4J271 114 aa8.14□□□□□ -1.11
NEB-215ENST00000489048 IGHV4-39P01824 125 aa8.14□□□□□ -1.11
NEB-215ENST00000489048 C20orf203Q8NBC4 194 aa8.14□□□□□ -1.11
NEB-215ENST00000489048 EDA2RQ9HAV5 297 aa8.14□□□□□ -1.11
NEB-215ENST00000489048 A4D1N5 150 aa8.13□□□□□ -1.11
NEB-215ENST00000489048 TMEM262E9PQX1 116 aa8.13□□□□□ -1.11
NEB-215ENST00000489048 H3BUX3 64 aa8.13□□□□□ -1.11
NEB-215ENST00000489048 M0R2P5 195 aa8.13□□□□□ -1.11
NEB-215ENST00000489048 RHODO00212 210 aa8.13□□□□□ -1.11
NEB-215ENST00000489048 LY6EQ16553 131 aa8.13□□□□□ -1.11
NEB-215ENST00000489048 ZFHX2Q9C0A1 2572 aaPredicted RBP8.12□□□□□ -1.11
NEB-215ENST00000489048 SCGB1C2P0DMR2 95 aa8.12□□□□□ -1.11
NEB-215ENST00000489048 IGHV4-38-2P0DP08 117 aa8.12□□□□□ -1.11
NEB-215ENST00000489048 SRD5A1P18405 259 aa8.12□□□□□ -1.11
NEB-215ENST00000489048 EDN2P20800 178 aa8.12□□□□□ -1.11
NEB-215ENST00000489048 GEMIN7Q9H840 131 aaKnown RBP8.12□□□□□ -1.11
NEB-215ENST00000489048 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.12□□□□□ -1.11
NEB-215ENST00000489048 I3L3M4 83 aa8.12□□□□□ -1.11
NEB-215ENST00000489048 BLCAPP62952 87 aa8.12□□□□□ -1.11
NEB-215ENST00000489048 ZNF56Q15929 161 aa8.12□□□□□ -1.11
NEB-215ENST00000489048 IGLV4-3A0A075B6K6 122 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 IGHV1OR15-1A0A075B7D0 117 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 SLC25A20O43772 301 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 FAM74A4Q5TZK3 123 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 ERG28Q9UKR5 140 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 CACNA1BQ00975 2339 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 RELNP78509 3460 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 Q8N1Y9 231 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 DEFB104AQ8WTQ1 72 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 OPRPNQ99935 248 aaPredicted RBP8.11□□□□□ -1.11
NEB-215ENST00000489048 PIMREGQ9BSJ6 248 aa8.11□□□□□ -1.11
NEB-215ENST00000489048 IGHV4-61A0A0C4DH41 118 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms