RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 Q6ZQT7 251 aa13.76□□□□□ -0.21
COL16A1-215ENST00000488897 Q8N2B8 174 aa13.76□□□□□ -0.21
COL16A1-215ENST00000488897 MRPL35Q9NZE8 188 aaKnown RBP13.76□□□□□ -0.21
COL16A1-215ENST00000488897 TRBV25-1A0A075B6N4 114 aa13.76□□□□□ -0.21
COL16A1-215ENST00000488897 OVOL1O14753 267 aa13.76□□□□□ -0.21
COL16A1-215ENST00000488897 IGF1P05019 195 aa13.76□□□□□ -0.21
COL16A1-215ENST00000488897 OR10J6PQ8NGY7 276 aa13.76□□□□□ -0.21
COL16A1-215ENST00000488897 C20orf173Q96LM9 149 aa13.76□□□□□ -0.21
COL16A1-215ENST00000488897 NAA38Q9BRA0 125 aaKnown RBP13.76□□□□□ -0.21
COL16A1-215ENST00000488897 NDUFA4O00483 81 aa13.75□□□□□ -0.21
COL16A1-215ENST00000488897 PRR9Q5T870 116 aa13.75□□□□□ -0.21
COL16A1-215ENST00000488897 SPCS1Q9Y6A9 102 aa13.75□□□□□ -0.21
COL16A1-215ENST00000488897 DNHD1Q96M86 4753 aa13.75□□□□□ -0.21
COL16A1-215ENST00000488897 TRAV21A0A0B4J279 112 aa13.75□□□□□ -0.21
COL16A1-215ENST00000488897 FABP2P12104 132 aa13.75□□□□□ -0.21
COL16A1-215ENST00000488897 PROK1P58294 105 aa13.75□□□□□ -0.21
COL16A1-215ENST00000488897 SMIM2Q9BVW6 85 aa13.75□□□□□ -0.21
COL16A1-215ENST00000488897 TTTY13Q9BZ97 58 aa13.75□□□□□ -0.21
COL16A1-215ENST00000488897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.74□□□□□ -0.21
COL16A1-215ENST00000488897 PLNP26678 52 aa13.74□□□□□ -0.21
COL16A1-215ENST00000488897 FXYD2P54710 66 aa13.74□□□□□ -0.21
COL16A1-215ENST00000488897 TM4SF20Q53R12 229 aa13.74□□□□□ -0.21
COL16A1-215ENST00000488897 CFHR3Q02985 330 aa13.74□□□□□ -0.21
COL16A1-215ENST00000488897 DEFB136Q30KP8 78 aa13.74□□□□□ -0.21
COL16A1-215ENST00000488897 ORMDL2Q53FV1 153 aa13.74□□□□□ -0.21
COL16A1-215ENST00000488897 SAMD5Q5TGI4 173 aa13.74□□□□□ -0.21
COL16A1-215ENST00000488897 ZFAND2AQ8N6M9 145 aa13.73□□□□□ -0.21
COL16A1-215ENST00000488897 CITED2Q99967 270 aaPredicted RBP13.73□□□□□ -0.21
COL16A1-215ENST00000488897 TM2D2Q9BX73 214 aa13.73□□□□□ -0.21
COL16A1-215ENST00000488897 TRAV12-1A0A0B4J245 112 aa13.73□□□□□ -0.21
COL16A1-215ENST00000488897 CEND1Q8N111 149 aa13.73□□□□□ -0.21
COL16A1-215ENST00000488897 C20orf78Q9BR46 151 aa13.73□□□□□ -0.21
COL16A1-215ENST00000488897 K7EMI3 77 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 S100A4P26447 101 aaKnown RBP13.72□□□□□ -0.21
COL16A1-215ENST00000488897 UNQ9165/PRO28630Q6UXU0 137 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 GPHB5Q86YW7 130 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 C16orf95Q9H693 158 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 H7C1H1 209 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 BRI3O95415 125 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 TRBV12-3P01733 135 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 ASIPP42127 132 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 TAL2Q16559 108 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 USMG5Q96IX5 58 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 DPH3P1Q9H4G8 78 aa13.72□□□□□ -0.21
COL16A1-215ENST00000488897 H3BUA1 57 aa13.71□□□□□ -0.21
COL16A1-215ENST00000488897 SOCS3O14543 225 aa13.71□□□□□ -0.21
COL16A1-215ENST00000488897 MED14OSP0DP75 135 aa13.71□□□□□ -0.21
COL16A1-215ENST00000488897 SUMO2P61956 95 aaKnown RBP13.71□□□□□ -0.21
COL16A1-215ENST00000488897 COTL1Q14019 142 aa13.71□□□□□ -0.21
COL16A1-215ENST00000488897 NSUN5P1Q3KNT7 163 aa13.71□□□□□ -0.21
COL16A1-215ENST00000488897 J3KRW8 73 aa13.71□□□□□ -0.22
COL16A1-215ENST00000488897 M0R381 172 aa13.71□□□□□ -0.22
COL16A1-215ENST00000488897 NDUFA7O95182 113 aa13.71□□□□□ -0.22
COL16A1-215ENST00000488897 F8VRH5 84 aa13.7□□□□□ -0.22
COL16A1-215ENST00000488897 PSMB8P28062 276 aa13.7□□□□□ -0.22
COL16A1-215ENST00000488897 PHLDA3Q9Y5J5 127 aa13.7□□□□□ -0.22
COL16A1-215ENST00000488897 SELENOKQ9Y6D0 94 aa13.7□□□□□ -0.22
COL16A1-215ENST00000488897 IGLV1-40P01703 118 aa13.7□□□□□ -0.22
COL16A1-215ENST00000488897 TOMM6Q96B49 74 aa13.7□□□□□ -0.22
COL16A1-215ENST00000488897 SAP30O75446 220 aa13.69□□□□□ -0.22
COL16A1-215ENST00000488897 RASL10AQ92737 203 aa13.69□□□□□ -0.22
COL16A1-215ENST00000488897 SCGB3A1Q96QR1 104 aa13.69□□□□□ -0.22
COL16A1-215ENST00000488897 NOTCH3Q9UM47 2321 aa13.69□□□□□ -0.22
COL16A1-215ENST00000488897 TRBV7-9A0A0J9YWB2 115 aa13.69□□□□□ -0.22
COL16A1-215ENST00000488897 NEGR1Q7Z3B1 354 aa13.69□□□□□ -0.22
COL16A1-215ENST00000488897 MAPKAPK5-AS1Q8N8E1 139 aa13.69□□□□□ -0.22
COL16A1-215ENST00000488897 WFDC12Q8WWY7 111 aa13.69□□□□□ -0.22
COL16A1-215ENST00000488897 FAM19A4Q96LR4 140 aa13.69□□□□□ -0.22
COL16A1-215ENST00000488897 TMEM89A2RUT3 159 aa13.68□□□□□ -0.22
COL16A1-215ENST00000488897 ANXA2RQ3ZCQ2 193 aa13.68□□□□□ -0.22
COL16A1-215ENST00000488897 SPATA3Q8NHX4 192 aa13.68□□□□□ -0.22
COL16A1-215ENST00000488897 PHLDA1Q8WV24 401 aaPredicted RBP13.68□□□□□ -0.22
COL16A1-215ENST00000488897 PPP1R17O96001 155 aa13.68□□□□□ -0.22
COL16A1-215ENST00000488897 APRG1Q8IVJ8 170 aa13.68□□□□□ -0.22
COL16A1-215ENST00000488897 C14orf178Q8N769 122 aaPredicted RBP13.68□□□□□ -0.22
COL16A1-215ENST00000488897 NHP2Q9NX24 153 aaKnown RBP13.68□□□□□ -0.22
COL16A1-215ENST00000488897 CHTOPQ9Y3Y2 248 aaKnown RBP13.68□□□□□ -0.22
COL16A1-215ENST00000488897 G3V4G9 280 aa13.67□□□□□ -0.22
COL16A1-215ENST00000488897 RPL11P62913 178 aaKnown RBP13.67□□□□□ -0.22
COL16A1-215ENST00000488897 RNASE4P34096 147 aaKnown RBP13.66□□□□□ -0.22
COL16A1-215ENST00000488897 NEXN-AS1Q8NBZ9 246 aa13.66□□□□□ -0.22
COL16A1-215ENST00000488897 K7ERJ3 54 aa13.65□□□□□ -0.22
COL16A1-215ENST00000488897 RPL39LQ96EH5 51 aaKnown RBP13.65□□□□□ -0.22
COL16A1-215ENST00000488897 LINC01619G3V211 115 aa13.64□□□□□ -0.23
COL16A1-215ENST00000488897 MGPP08493 103 aa13.64□□□□□ -0.23
COL16A1-215ENST00000488897 KLHL30-AS1Q8NEE0 82 aa13.64□□□□□ -0.23
COL16A1-215ENST00000488897 CSTL1Q9H114 145 aa13.64□□□□□ -0.23
COL16A1-215ENST00000488897 OR11H12B2RN74 326 aa13.64□□□□□ -0.23
COL16A1-215ENST00000488897 OR11H1Q8NG94 326 aa13.64□□□□□ -0.23
COL16A1-215ENST00000488897 OR11H2Q8NH07 326 aa13.64□□□□□ -0.23
COL16A1-215ENST00000488897 ANK2Q01484 3957 aa13.63□□□□□ -0.23
COL16A1-215ENST00000488897 SPRY2O43597 315 aa13.63□□□□□ -0.23
COL16A1-215ENST00000488897 DEFB1P60022 68 aa13.63□□□□□ -0.23
COL16A1-215ENST00000488897 C2orf66Q6UXQ4 117 aa13.63□□□□□ -0.23
COL16A1-215ENST00000488897 C3orf56Q8N813 242 aa13.63□□□□□ -0.23
COL16A1-215ENST00000488897 HIST1H4GQ99525 98 aa13.63□□□□□ -0.23
COL16A1-215ENST00000488897 RHPN1-AS1Q9BWJ2 59 aa13.63□□□□□ -0.23
COL16A1-215ENST00000488897 ADARB2-AS1A8MUL3 147 aa13.63□□□□□ -0.23
COL16A1-215ENST00000488897 E9PLD3 99 aa13.63□□□□□ -0.23
COL16A1-215ENST00000488897 GNRH2O43555 120 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms