RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SAMD10Q9BYL1 202 aa9.69□□□□□ -0.86
COL9A2-208ENST00000488463 APOBP04114 4563 aaKnown RBP9.68□□□□□ -0.86
COL9A2-208ENST00000488463 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
COL9A2-208ENST00000488463 RPL19P84098 196 aaKnown RBP9.68□□□□□ -0.86
COL9A2-208ENST00000488463 TMEM241Q24JQ0 296 aa9.68□□□□□ -0.86
COL9A2-208ENST00000488463 TTC32Q5I0X7 151 aa9.68□□□□□ -0.86
COL9A2-208ENST00000488463 SMIM12Q96EX1 92 aa9.68□□□□□ -0.86
COL9A2-208ENST00000488463 Q9UF83 564 aa9.68□□□□□ -0.86
COL9A2-208ENST00000488463 HSPG2P98160 4391 aa9.68□□□□□ -0.86
COL9A2-208ENST00000488463 TMSB15BA0A087X1C1 80 aa9.67□□□□□ -0.86
COL9A2-208ENST00000488463 A8MWV9 139 aa9.67□□□□□ -0.86
COL9A2-208ENST00000488463 LINC00694P0DN24 101 aa9.67□□□□□ -0.86
COL9A2-208ENST00000488463 TIRAPP58753 221 aa9.67□□□□□ -0.86
COL9A2-208ENST00000488463 SRSF3P84103 164 aaKnown RBP9.67□□□□□ -0.86
COL9A2-208ENST00000488463 Q6ZRN7 208 aaPredicted RBP9.67□□□□□ -0.86
COL9A2-208ENST00000488463 DAZAP1Q96EP5 407 aaKnown RBP9.67□□□□□ -0.86
COL9A2-208ENST00000488463 TRBV20OR9-2A0A075B6H5 130 aa9.66□□□□□ -0.86
COL9A2-208ENST00000488463 TMEM218A2RU14 115 aa9.66□□□□□ -0.86
COL9A2-208ENST00000488463 F8W036 122 aa9.66□□□□□ -0.86
COL9A2-208ENST00000488463 CXCL1P09341 107 aa9.66□□□□□ -0.86
COL9A2-208ENST00000488463 MGST1P10620 155 aaKnown RBP9.66□□□□□ -0.86
COL9A2-208ENST00000488463 BTF3P20290 206 aaKnown RBP9.66□□□□□ -0.86
COL9A2-208ENST00000488463 RHOHQ15669 191 aa9.66□□□□□ -0.86
COL9A2-208ENST00000488463 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
COL9A2-208ENST00000488463 SSBP4Q9BWG4 385 aaPredicted RBP9.66□□□□□ -0.86
COL9A2-208ENST00000488463 NAT8Q9UHE5 227 aa9.66□□□□□ -0.86
COL9A2-208ENST00000488463 LY96Q9Y6Y9 160 aa9.66□□□□□ -0.86
COL9A2-208ENST00000488463 CRYGDP07320 174 aa9.65□□□□□ -0.86
COL9A2-208ENST00000488463 MED14OSP0DP75 135 aa9.65□□□□□ -0.86
COL9A2-208ENST00000488463 CENPWQ5EE01 88 aa9.65□□□□□ -0.86
COL9A2-208ENST00000488463 SH2D6Q7Z4S9 175 aa9.65□□□□□ -0.86
COL9A2-208ENST00000488463 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
COL9A2-208ENST00000488463 SNAI2O43623 268 aa9.64□□□□□ -0.87
COL9A2-208ENST00000488463 DNAH10OSP0CZ25 163 aa9.64□□□□□ -0.87
COL9A2-208ENST00000488463 LINC00315P59091 139 aa9.64□□□□□ -0.87
COL9A2-208ENST00000488463 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
COL9A2-208ENST00000488463 PRADC1Q9BSG0 188 aa9.64□□□□□ -0.87
COL9A2-208ENST00000488463 SEC11CQ9BY50 192 aa9.64□□□□□ -0.87
COL9A2-208ENST00000488463 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
COL9A2-208ENST00000488463 C19orf71A6NCJ1 209 aa9.63□□□□□ -0.87
COL9A2-208ENST00000488463 C9JQL5 133 aa9.63□□□□□ -0.87
COL9A2-208ENST00000488463 PNRC1Q12796 327 aaPredicted RBP9.63□□□□□ -0.87
COL9A2-208ENST00000488463 PRR27Q6MZM9 219 aa9.63□□□□□ -0.87
COL9A2-208ENST00000488463 SLC7A5P1Q8MH63 180 aa9.63□□□□□ -0.87
COL9A2-208ENST00000488463 SYT8Q8NBV8 401 aa9.63□□□□□ -0.87
COL9A2-208ENST00000488463 OR10AG1Q8NH19 301 aa9.63□□□□□ -0.87
COL9A2-208ENST00000488463 TNFRSF18Q9Y5U5 241 aa9.63□□□□□ -0.87
COL9A2-208ENST00000488463 M0R381 172 aa9.62□□□□□ -0.87
COL9A2-208ENST00000488463 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
COL9A2-208ENST00000488463 C15orf54Q8N8G6 183 aa9.62□□□□□ -0.87
COL9A2-208ENST00000488463 A0A087WWL8 130 aa9.61□□□□□ -0.87
COL9A2-208ENST00000488463 XKRY2A2RUG3 117 aa9.61□□□□□ -0.87
COL9A2-208ENST00000488463 RHODO00212 210 aa9.61□□□□□ -0.87
COL9A2-208ENST00000488463 ADIRFQ15847 76 aa9.61□□□□□ -0.87
COL9A2-208ENST00000488463 ZFP82Q8N141 532 aa9.61□□□□□ -0.87
COL9A2-208ENST00000488463 OCC1Q8TAD7 63 aa9.61□□□□□ -0.87
COL9A2-208ENST00000488463 K7EP13 123 aa9.6□□□□□ -0.87
COL9A2-208ENST00000488463 IGLC6P0CF74 106 aa9.6□□□□□ -0.87
COL9A2-208ENST00000488463 ATP6V0E2Q8NHE4 81 aa9.6□□□□□ -0.87
COL9A2-208ENST00000488463 GTSF1LQ9H1H1 148 aa9.6□□□□□ -0.87
COL9A2-208ENST00000488463 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 PPP1R2P9O14990 202 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 P01737 135 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 ERVFC1-1P60608 527 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 RPS20P60866 119 aaKnown RBP9.59□□□□□ -0.87
COL9A2-208ENST00000488463 GAGE1Q13065 139 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 GAGE4Q13068 117 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 GAGE5Q13069 117 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 GAGE13Q4V321 117 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 LINC01556Q5JQF7 62 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 LELP1Q5T871 98 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 FAM74A4Q5TZK3 123 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 KIF25-AS1Q9Y6Z4 181 aa9.59□□□□□ -0.87
COL9A2-208ENST00000488463 IGHV3-38A0A0C4DH36 116 aa9.58□□□□□ -0.88
COL9A2-208ENST00000488463 MUC21A0A0G2JKD1 596 aa9.58□□□□□ -0.88
COL9A2-208ENST00000488463 MUC21A0A140T8X8 626 aa9.58□□□□□ -0.88
COL9A2-208ENST00000488463 MT-ND4LP03901 98 aa9.58□□□□□ -0.88
COL9A2-208ENST00000488463 GZMBP10144 247 aa9.58□□□□□ -0.88
COL9A2-208ENST00000488463 LINC01551Q86U37 167 aa9.58□□□□□ -0.88
COL9A2-208ENST00000488463 SVBPQ8N300 66 aa9.58□□□□□ -0.88
COL9A2-208ENST00000488463 K7EN84 100 aa9.57□□□□□ -0.88
COL9A2-208ENST00000488463 SNAPINO95295 136 aa9.57□□□□□ -0.88
COL9A2-208ENST00000488463 APOC3P02656 99 aa9.57□□□□□ -0.88
COL9A2-208ENST00000488463 EVI2AP22794 236 aa9.57□□□□□ -0.88
COL9A2-208ENST00000488463 KRTAP10-2P60368 255 aa9.57□□□□□ -0.88
COL9A2-208ENST00000488463 RPL23P62829 140 aaKnown RBP9.57□□□□□ -0.88
COL9A2-208ENST00000488463 CARHSP1Q9Y2V2 147 aaKnown RBP9.57□□□□□ -0.88
COL9A2-208ENST00000488463 DNAH8Q96JB1 4490 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 GATCO43716 136 aaKnown RBP9.56□□□□□ -0.88
COL9A2-208ENST00000488463 C10orf91Q5T1B1 145 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 FAM231DQ6ZW35 169 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 Q8N3U1 123 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 OR2D3Q8NGH3 330 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 OR10G8Q8NGN5 311 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 OSTCQ9NRP0 149 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 MSRB1Q9NZV6 116 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 ABCA13Q86UQ4 5058 aa9.56□□□□□ -0.88
COL9A2-208ENST00000488463 TRAV8-6A0A0B4J262 113 aa9.55□□□□□ -0.88
COL9A2-208ENST00000488463 TRBV10-1A0A0K0K1A3 114 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms