RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PRRC2AP48634 2157 aaKnown RBP19.42■□□□□ 0.7
HLA-C-208ENST00000487245 C9orf85Q96MD7 179 aa19.42■□□□□ 0.7
HLA-C-208ENST00000487245 Q96MF0 132 aa19.42■□□□□ 0.7
HLA-C-208ENST00000487245 E9PLD3 99 aa19.41■□□□□ 0.7
HLA-C-208ENST00000487245 CYSLTR1Q9Y271 337 aa19.41■□□□□ 0.7
HLA-C-208ENST00000487245 MYMXA0A1B0GTQ4 84 aa19.41■□□□□ 0.7
HLA-C-208ENST00000487245 PRSS29PA6NIE9 313 aa19.41■□□□□ 0.7
HLA-C-208ENST00000487245 CD7P09564 240 aa19.41■□□□□ 0.7
HLA-C-208ENST00000487245 RNF151Q2KHN1 245 aa19.41■□□□□ 0.7
HLA-C-208ENST00000487245 TRBV7-3A0A075B6L6 115 aa19.4■□□□□ 0.7
HLA-C-208ENST00000487245 TRBV6-5A0A0K0K1A5 114 aa19.4■□□□□ 0.7
HLA-C-208ENST00000487245 SUMO4Q6EEV6 95 aa19.4■□□□□ 0.7
HLA-C-208ENST00000487245 VPS13CQ709C8 3753 aa19.4■□□□□ 0.7
HLA-C-208ENST00000487245 TEX29Q8N6K0 151 aa19.39■□□□□ 0.7
HLA-C-208ENST00000487245 NHP2Q9NX24 153 aaKnown RBP19.39■□□□□ 0.7
HLA-C-208ENST00000487245 ZNF462Q96JM2 2506 aa19.39■□□□□ 0.7
HLA-C-208ENST00000487245 VCYO14598 125 aa19.39■□□□□ 0.69
HLA-C-208ENST00000487245 FOXI2Q6ZQN5 318 aa19.39■□□□□ 0.69
HLA-C-208ENST00000487245 KMT2BQ9UMN6 2715 aaPredicted RBP19.38■□□□□ 0.69
HLA-C-208ENST00000487245 IGHV3-16A0A0C4DH30 117 aa19.38■□□□□ 0.69
HLA-C-208ENST00000487245 NEGR1Q7Z3B1 354 aa19.38■□□□□ 0.69
HLA-C-208ENST00000487245 RIPPLY3P57055 190 aa19.37■□□□□ 0.69
HLA-C-208ENST00000487245 PAPPA-AS1Q5QFB9 102 aa19.37■□□□□ 0.69
HLA-C-208ENST00000487245 ZFP2Q6ZN57 461 aa19.37■□□□□ 0.69
HLA-C-208ENST00000487245 WFDC12Q8WWY7 111 aa19.37■□□□□ 0.69
HLA-C-208ENST00000487245 TMEM141Q96I45 108 aa19.37■□□□□ 0.69
HLA-C-208ENST00000487245 CELSR1Q9NYQ6 3014 aa19.37■□□□□ 0.69
HLA-C-208ENST00000487245 SYT8Q8NBV8 401 aa19.37■□□□□ 0.69
HLA-C-208ENST00000487245 ZFHX3Q15911 3703 aa19.36■□□□□ 0.69
HLA-C-208ENST00000487245 A0A1B0GWB2 263 aa19.36■□□□□ 0.69
HLA-C-208ENST00000487245 IGIPA6NJ69 53 aa19.36■□□□□ 0.69
HLA-C-208ENST00000487245 K7ERJ3 54 aa19.36■□□□□ 0.69
HLA-C-208ENST00000487245 TCTEX1D4Q5JR98 221 aa19.36■□□□□ 0.69
HLA-C-208ENST00000487245 TMEM86BQ8N661 226 aa19.36■□□□□ 0.69
HLA-C-208ENST00000487245 C12orf74Q32Q52 190 aa19.35■□□□□ 0.69
HLA-C-208ENST00000487245 HIST1H4GQ99525 98 aa19.35■□□□□ 0.69
HLA-C-208ENST00000487245 IGHV1OR15-1A0A075B7D0 117 aa19.35■□□□□ 0.69
HLA-C-208ENST00000487245 CRYGDP07320 174 aa19.35■□□□□ 0.69
HLA-C-208ENST00000487245 DUX5Q96PT3 197 aa19.35■□□□□ 0.69
HLA-C-208ENST00000487245 TIMM17AQ99595 171 aa19.35■□□□□ 0.69
HLA-C-208ENST00000487245 JPT2Q9H910 190 aa19.35■□□□□ 0.69
HLA-C-208ENST00000487245 TRAV2A0A0B4J234 112 aa19.34■□□□□ 0.69
HLA-C-208ENST00000487245 TRBV27A0A0K0K1C4 114 aa19.34■□□□□ 0.69
HLA-C-208ENST00000487245 IGLL5B9A064 214 aa19.34■□□□□ 0.69
HLA-C-208ENST00000487245 TSHBP01222 138 aa19.34■□□□□ 0.69
HLA-C-208ENST00000487245 KIR2DL4Q99706 377 aa19.34■□□□□ 0.69
HLA-C-208ENST00000487245 VPS25Q9BRG1 176 aa19.34■□□□□ 0.69
HLA-C-208ENST00000487245 FAM208BQ5VWN6 2430 aa19.34■□□□□ 0.69
HLA-C-208ENST00000487245 IGKV3-20P01619 116 aa19.33■□□□□ 0.69
HLA-C-208ENST00000487245 PRADC1Q9BSG0 188 aa19.33■□□□□ 0.69
HLA-C-208ENST00000487245 TP53TG1Q9Y2A0 90 aa19.33■□□□□ 0.69
HLA-C-208ENST00000487245 KRTAP1-3Q8IUG1 177 aa19.33■□□□□ 0.68
HLA-C-208ENST00000487245 PEMTQ9UBM1 199 aa19.33■□□□□ 0.68
HLA-C-208ENST00000487245 UBR5O95071 2799 aaPredicted RBP19.32■□□□□ 0.68
HLA-C-208ENST00000487245 PMVKQ15126 192 aa19.32■□□□□ 0.68
HLA-C-208ENST00000487245 C4orf3Q8WVX3 66 aa19.31■□□□□ 0.68
HLA-C-208ENST00000487245 IGLV4-69A0A075B6H9 119 aa19.31■□□□□ 0.68
HLA-C-208ENST00000487245 TRAV12-2A0A075B6T6 113 aa19.31■□□□□ 0.68
HLA-C-208ENST00000487245 A0A087WWL8 130 aa19.31■□□□□ 0.68
HLA-C-208ENST00000487245 SDHAF1A6NFY7 115 aa19.31■□□□□ 0.68
HLA-C-208ENST00000487245 SPINK13Q1W4C9 94 aa19.31■□□□□ 0.68
HLA-C-208ENST00000487245 SLURP1P55000 103 aa19.3■□□□□ 0.68
HLA-C-208ENST00000487245 AMTNQ6UX39 209 aa19.3■□□□□ 0.68
HLA-C-208ENST00000487245 CELSR2Q9HCU4 2923 aa19.3■□□□□ 0.68
HLA-C-208ENST00000487245 USP9YO00507 2555 aaPredicted RBP19.3■□□□□ 0.68
HLA-C-208ENST00000487245 TRGV11A0A075B6L2 103 aa19.29■□□□□ 0.68
HLA-C-208ENST00000487245 F5H697 171 aa19.29■□□□□ 0.68
HLA-C-208ENST00000487245 G3V4G9 280 aa19.29■□□□□ 0.68
HLA-C-208ENST00000487245 SAP30O75446 220 aa19.29■□□□□ 0.68
HLA-C-208ENST00000487245 Q8N1Y9 231 aa19.29■□□□□ 0.68
HLA-C-208ENST00000487245 MDFICQ9P1T7 246 aa19.28■□□□□ 0.68
HLA-C-208ENST00000487245 UTP20O75691 2785 aaKnown RBP19.28■□□□□ 0.68
HLA-C-208ENST00000487245 RHOHQ15669 191 aa19.28■□□□□ 0.68
HLA-C-208ENST00000487245 ZNF479Q96JC4 524 aa19.28■□□□□ 0.68
HLA-C-208ENST00000487245 C11orf86A6NJI1 115 aa19.27■□□□□ 0.68
HLA-C-208ENST00000487245 A8MTW9 85 aa19.27■□□□□ 0.68
HLA-C-208ENST00000487245 M0QY20 66 aa19.27■□□□□ 0.68
HLA-C-208ENST00000487245 HERVK_113P61574 105 aa19.27■□□□□ 0.68
HLA-C-208ENST00000487245 ZNF256Q9Y2P7 627 aaPredicted RBP19.27■□□□□ 0.68
HLA-C-208ENST00000487245 FBN2P35556 2912 aa19.27■□□□□ 0.68
HLA-C-208ENST00000487245 NSUN5P1Q3KNT7 163 aa19.26■□□□□ 0.67
HLA-C-208ENST00000487245 ZNF815PA8K554 130 aa19.26■□□□□ 0.67
HLA-C-208ENST00000487245 RRN3P1Q2M238 152 aa19.26■□□□□ 0.67
HLA-C-208ENST00000487245 MORN3Q6PF18 240 aaPredicted RBP19.26■□□□□ 0.67
HLA-C-208ENST00000487245 C18orf65Q6ZTR6 163 aa19.26■□□□□ 0.67
HLA-C-208ENST00000487245 TRPT1Q86TN4 253 aaKnown RBP19.26■□□□□ 0.67
HLA-C-208ENST00000487245 DEFB136Q30KP8 78 aa19.25■□□□□ 0.67
HLA-C-208ENST00000487245 CHD6Q8TD26 2715 aa19.25■□□□□ 0.67
HLA-C-208ENST00000487245 CRYBG3Q68DQ2 2970 aa19.25■□□□□ 0.67
HLA-C-208ENST00000487245 C21orf62-AS1Q17RA5 79 aa19.24■□□□□ 0.67
HLA-C-208ENST00000487245 AGRNO00468 2067 aa19.24■□□□□ 0.67
HLA-C-208ENST00000487245 ZNF876PQ49A33 203 aa19.24■□□□□ 0.67
HLA-C-208ENST00000487245 RPL39P62891 51 aaKnown RBP19.23■□□□□ 0.67
HLA-C-208ENST00000487245 LRRK2Q5S007 2527 aa19.23■□□□□ 0.67
HLA-C-208ENST00000487245 DEFB131AP59861 70 aa19.22■□□□□ 0.67
HLA-C-208ENST00000487245 SCGB2A2Q13296 93 aa19.22■□□□□ 0.67
HLA-C-208ENST00000487245 EDA2RQ9HAV5 297 aa19.22■□□□□ 0.67
HLA-C-208ENST00000487245 MAP1AP78559 2803 aaPredicted RBP19.22■□□□□ 0.67
HLA-C-208ENST00000487245 ZNF56Q15929 161 aa19.22■□□□□ 0.67
HLA-C-208ENST00000487245 FAM74A4Q5TZK3 123 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms