RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 FAM167A-AS1Q96KT0 104 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 C2orf50Q96LR7 162 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 SLC25A2Q9BXI2 301 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 NPCDR1Q9BY65 106 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 OR51M1Q9H341 326 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 LYRM2Q9NU23 88 aaPredicted RBP2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 LSM5Q9Y4Y9 91 aaKnown RBP2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 LENEPQ9Y5L5 61 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 TRAV8-6A0A0B4J262 113 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 UBE2L5PA0A1B0GUS4 154 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 IGSF23A1L1A6 192 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 M0R2P5 195 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 CCSO14618 274 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 FGF7P21781 194 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 CAMPP49913 170 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 LAGE3Q14657 143 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 TMEM183BQ1AE95 376 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 GCSAMLQ5JQS6 135 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 MUC21Q5SSG8 566 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 Q6ZSA8 131 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 MIR17HGQ75NE6 70 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 TMEM183AQ8IXX5 376 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 NHLRC2Q8NBF2 726 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 Q8TAT8 98 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 DEFB104AQ8WTQ1 72 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 FXYD5Q96DB9 178 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 SDHCQ99643 169 aaPredicted RBP2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 PAXXQ9BUH6 204 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 SLC25A31Q9H0C2 315 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 SH3BGRL3Q9H299 93 aa2.59□□□□□ -1.99
SNRNP40-205ENST00000486941 IGHV3-16A0A0C4DH30 117 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 LOC100131303A0A0U1RQF7 123 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 TRBV6-4A0A1B0GX49 114 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 CCDC160A6NGH7 325 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 PLA2G10O15496 165 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 LYRM1O43325 122 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 GNRH2O43555 120 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 TCRBP04435 133 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 OR10J4P0C629 311 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 IL7P13232 177 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 PPT1P50897 306 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 S100A10P60903 97 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 RANP62826 216 aaKnown RBP2.58□□□□□ -2
SNRNP40-205ENST00000486941 CYCSP99999 105 aaKnown RBP2.58□□□□□ -2
SNRNP40-205ENST00000486941 OR10J3Q5JRS4 329 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 LELP1Q5T871 98 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 SLC51BQ86UW2 128 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 TYMSOSQ8TAI1 123 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 PHYHIPLQ96FC7 376 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 KCNS1Q96KK3 526 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 FAM218AQ96MZ4 157 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 PRADC1Q9BSG0 188 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 Q9HAA7 133 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 KCNIP2Q9NS61 270 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 DNAH8Q96JB1 4490 aa2.58□□□□□ -2
SNRNP40-205ENST00000486941 TRAV6A0A075B6T7 132 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 TRAV8-3A0A0A6YYJ7 113 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 TRAV21A0A0B4J279 112 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 FBLL1A6NHQ2 334 aaKnown RBP2.57□□□□□ -2
SNRNP40-205ENST00000486941 C17orf112F2Z3M2 114 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 RS1O15537 224 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 OR7C2O60412 319 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 PFDN1O60925 122 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 OXTP01178 125 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 IGHV3-30P01768 117 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 IGHV3-33P01772 117 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 TYMSP04818 313 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 IGHV3-30-3P0DP02 117 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 IGHV3-30-5P0DP03 117 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 TAS2R45P59539 299 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 ASAH1Q13510 395 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 WFDC2Q14508 124 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 RHOHQ15669 191 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 FAM74A1Q5RGS3 127 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 CFAP126Q5VTH2 177 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 Q6ZVH6 145 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 LINC00469Q8N7U9 141 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 SLC25A29Q8N8R3 303 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 OR11H4Q8NGC9 324 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 OR5C1Q8NGR4 320 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 ATP6V0E2Q8NHE4 81 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 CMTM2Q8TAZ6 248 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 PTH2Q96A98 100 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 ATP5SQ99766 215 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 SEC22CQ9BRL7 303 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 WDR61Q9GZS3 305 aaKnown RBP2.57□□□□□ -2
SNRNP40-205ENST00000486941 GTSF1LQ9H1H1 148 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 OTORQ9NRC9 128 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 NUDT15Q9NV35 164 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 NAGKQ9UJ70 344 aa2.57□□□□□ -2
SNRNP40-205ENST00000486941 RNF222A6NCQ9 220 aa2.56□□□□□ -2
SNRNP40-205ENST00000486941 PGPA6NDG6 321 aa2.56□□□□□ -2
SNRNP40-205ENST00000486941 MGST1P10620 155 aaKnown RBP2.56□□□□□ -2
SNRNP40-205ENST00000486941 KRTAP10-4P60372 401 aaPredicted RBP2.56□□□□□ -2
SNRNP40-205ENST00000486941 UBE2L3P68036 154 aaKnown RBP2.56□□□□□ -2
SNRNP40-205ENST00000486941 HIGD2BQ4VC39 106 aa2.56□□□□□ -2
SNRNP40-205ENST00000486941 KHDC3LQ587J8 217 aa2.56□□□□□ -2
SNRNP40-205ENST00000486941 SCXQ7RTU7 201 aa2.56□□□□□ -2
SNRNP40-205ENST00000486941 Q8N976 141 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms