RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 RBAKDNA6NC62 111 aa10.1□□□□□ -0.79
HMGN1-216ENST00000486741 JPT2Q9H910 190 aa10.1□□□□□ -0.79
HMGN1-216ENST00000486741 ZZEF1O43149 2961 aa10.1□□□□□ -0.79
HMGN1-216ENST00000486741 Q6ZQT7 251 aa10.1□□□□□ -0.79
HMGN1-216ENST00000486741 KRTAP10-9P60411 292 aa10.09□□□□□ -0.79
HMGN1-216ENST00000486741 ATP6V0BQ99437 205 aa10.09□□□□□ -0.79
HMGN1-216ENST00000486741 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
HMGN1-216ENST00000486741 PCP2Q8IVA1 136 aa10.09□□□□□ -0.79
HMGN1-216ENST00000486741 MRAP2Q96G30 205 aa10.09□□□□□ -0.79
HMGN1-216ENST00000486741 LINC01559Q495D7 138 aa10.09□□□□□ -0.79
HMGN1-216ENST00000486741 WFDC11Q8NEX6 87 aa10.09□□□□□ -0.79
HMGN1-216ENST00000486741 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
HMGN1-216ENST00000486741 ANKRD39Q53RE8 183 aa10.08□□□□□ -0.8
HMGN1-216ENST00000486741 ZNF843Q8N446 348 aa10.08□□□□□ -0.8
HMGN1-216ENST00000486741 TRGV4A0A0C4DH28 118 aa10.08□□□□□ -0.8
HMGN1-216ENST00000486741 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
HMGN1-216ENST00000486741 MEIG1Q5JSS6 88 aa10.08□□□□□ -0.8
HMGN1-216ENST00000486741 DMDP11532 3685 aa10.08□□□□□ -0.8
HMGN1-216ENST00000486741 C2orf70A6NJV1 201 aa10.07□□□□□ -0.8
HMGN1-216ENST00000486741 LINC00310P59036 64 aa10.07□□□□□ -0.8
HMGN1-216ENST00000486741 NPC2P61916 151 aa10.07□□□□□ -0.8
HMGN1-216ENST00000486741 RNASE13Q5GAN3 156 aaKnown RBP10.07□□□□□ -0.8
HMGN1-216ENST00000486741 C9orf47Q6ZRZ4 202 aa10.07□□□□□ -0.8
HMGN1-216ENST00000486741 TRAV2A0A0B4J234 112 aa10.07□□□□□ -0.8
HMGN1-216ENST00000486741 INSP01308 110 aa10.07□□□□□ -0.8
HMGN1-216ENST00000486741 MRPL53Q96EL3 112 aaKnown RBP10.07□□□□□ -0.8
HMGN1-216ENST00000486741 RBX1P62877 108 aa10.07□□□□□ -0.8
HMGN1-216ENST00000486741 OR9G4Q8NGQ1 327 aa10.07□□□□□ -0.8
HMGN1-216ENST00000486741 F8W735 103 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-216ENST00000486741 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 CRXO43186 299 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-216ENST00000486741 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 BVES-AS1Q5T3Y7 98 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 LGALS9CQ6DKI2 356 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 ZFAND6Q6FIF0 208 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 SPXQ9BT56 116 aa10.06□□□□□ -0.8
HMGN1-216ENST00000486741 GAGE12HA6NDE8 117 aa10.05□□□□□ -0.8
HMGN1-216ENST00000486741 EDN2P20800 178 aa10.05□□□□□ -0.8
HMGN1-216ENST00000486741 CTRLP40313 264 aa10.05□□□□□ -0.8
HMGN1-216ENST00000486741 TSPAN13O95857 204 aa10.05□□□□□ -0.8
HMGN1-216ENST00000486741 COX8AP10176 69 aa10.05□□□□□ -0.8
HMGN1-216ENST00000486741 PLNP26678 52 aa10.05□□□□□ -0.8
HMGN1-216ENST00000486741 CHAC1Q9BUX1 264 aa10.05□□□□□ -0.8
HMGN1-216ENST00000486741 K7EMI3 77 aa10.05□□□□□ -0.8
HMGN1-216ENST00000486741 LENEPQ9Y5L5 61 aa10.05□□□□□ -0.8
HMGN1-216ENST00000486741 Q8N1Y9 231 aa10.04□□□□□ -0.8
HMGN1-216ENST00000486741 MDFICQ9P1T7 246 aa10.04□□□□□ -0.8
HMGN1-216ENST00000486741 GAS8-AS1O95177 125 aa10.04□□□□□ -0.8
HMGN1-216ENST00000486741 TMEM61Q8N0U2 210 aa10.04□□□□□ -0.8
HMGN1-216ENST00000486741 SS18L2Q9UHA2 77 aa10.04□□□□□ -0.8
HMGN1-216ENST00000486741 TRBV6-1A0A0K0K1D8 114 aa10.04□□□□□ -0.8
HMGN1-216ENST00000486741 GPHB5Q86YW7 130 aa10.04□□□□□ -0.8
HMGN1-216ENST00000486741 CCL24O00175 119 aa10.03□□□□□ -0.8
HMGN1-216ENST00000486741 IGHV4-31P0DP07 118 aa10.03□□□□□ -0.8
HMGN1-216ENST00000486741 C11orf21Q9P2W6 132 aa10.03□□□□□ -0.8
HMGN1-216ENST00000486741 C10orf126Q8N4M7 172 aa10.03□□□□□ -0.8
HMGN1-216ENST00000486741 TRAV13-1A0A0B4J241 112 aa10.03□□□□□ -0.8
HMGN1-216ENST00000486741 CLPSL1A2RUU4 121 aa10.03□□□□□ -0.8
HMGN1-216ENST00000486741 TEX48A0A1B0GUV7 120 aa10.02□□□□□ -0.8
HMGN1-216ENST00000486741 IGHG4P01861 327 aa10.02□□□□□ -0.8
HMGN1-216ENST00000486741 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.8
HMGN1-216ENST00000486741 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.8
HMGN1-216ENST00000486741 KALRNO60229 2985 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 C9orf118A6NHY6 69 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 AMTNQ6UX39 209 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 TRPT1Q86TN4 253 aaKnown RBP10.02□□□□□ -0.81
HMGN1-216ENST00000486741 IGLC6P0CF74 106 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 LINC01545Q5VT33 79 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 ASPMQ8IZT6 3477 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 GAGE12JA6NER3 117 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 MRPS12O15235 138 aaKnown RBP10.02□□□□□ -0.81
HMGN1-216ENST00000486741 GAGE4Q13068 117 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 GAGE5Q13069 117 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 FOXI2Q6ZQN5 318 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 TMEM101Q96IK0 257 aa10.02□□□□□ -0.81
HMGN1-216ENST00000486741 PRSS29PA6NIE9 313 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 B5MCH6 92 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 GAGE7O76087 117 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 GAGE12FP0CL80 117 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 GAGE12GP0CL81 117 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 GAGE12IP0CL82 117 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
HMGN1-216ENST00000486741 ZNF625Q96I27 306 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-216ENST00000486741 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 COX6CP09669 75 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 PRR9Q5T870 116 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 SUMO4Q6EEV6 95 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 C18orf65Q6ZTR6 163 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 RPL36AP83881 106 aaKnown RBP10.01□□□□□ -0.81
HMGN1-216ENST00000486741 ZNRF2Q8NHG8 242 aa10.01□□□□□ -0.81
HMGN1-216ENST00000486741 DLX4Q92988 240 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-216ENST00000486741 RPL36ALQ969Q0 106 aaKnown RBP10.01□□□□□ -0.81
HMGN1-216ENST00000486741 F8VRH5 84 aa10□□□□□ -0.81
HMGN1-216ENST00000486741 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
HMGN1-216ENST00000486741 K7EMT4 169 aa10□□□□□ -0.81
HMGN1-216ENST00000486741 K7EP34 96 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms