RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 POM121L12Q8N7R1 296 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 OR4C5Q8NGB2 326 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 MRAP2Q96G30 205 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 TM2D3Q9BRN9 247 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 ZMAT4Q9H898 229 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 KIF25-AS1Q9Y6Z4 181 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 TRGV2A0A075B6R0 118 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 TRAV4A0A0B4J268 109 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 F5H697 171 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 PHOX2AO14813 284 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 SPART-AS1P0CW21 52 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 KIAA1644Q3SXP7 199 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 MRPL51Q4U2R6 128 aaKnown RBP9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 CFAP126Q5VTH2 177 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 RNF185Q96GF1 192 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 C18orf15Q96N68 181 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 JPT2Q9H910 190 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 LAMTOR2Q9Y2Q5 125 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 U3KQK5 164 aa9.49□□□□□ -0.89
VTI1BP1-201ENST00000486325 A0A087WWL8 130 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 GAGE12BA1L429 117 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 GAGE7O76087 117 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 MGPP08493 103 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 GAGE12FP0CL80 117 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 GAGE12GP0CL81 117 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 GAGE12IP0CL82 117 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 LINC00315P59091 139 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 FAM74A4Q5TZK3 123 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 LINC00612Q8N6U2 182 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 ALKBH7Q9BT30 221 aaPredicted RBP9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 DKK2Q9UBU2 259 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
VTI1BP1-201ENST00000486325 H7C1H1 209 aa9.47□□□□□ -0.89
VTI1BP1-201ENST00000486325 FAM222AQ5U5X8 452 aa9.47□□□□□ -0.89
VTI1BP1-201ENST00000486325 PRELID3AQ96N28 172 aa9.47□□□□□ -0.89
VTI1BP1-201ENST00000486325 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
VTI1BP1-201ENST00000486325 SAMD10Q9BYL1 202 aa9.47□□□□□ -0.89
VTI1BP1-201ENST00000486325 C11orf68Q9H3H3 251 aaKnown RBP9.47□□□□□ -0.89
VTI1BP1-201ENST00000486325 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.89
VTI1BP1-201ENST00000486325 D6R8Y8 96 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST1H2BKO60814 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST1H2BJP06899 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 DEFB130BP0DP73 79 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 DEFB130AP0DP74 79 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST1H2BOP23527 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 SRIP30626 198 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST1H2BBP33778 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST1H2BDP58876 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST1H2BCP62807 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 ZNF56Q15929 161 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST2H2BEQ16778 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST1H2BHQ93079 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST1H2BNQ99877 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 HIST1H2BMQ99879 126 aa9.46□□□□□ -0.9
VTI1BP1-201ENST00000486325 DEFB4AO15263 64 aa9.45□□□□□ -0.9
VTI1BP1-201ENST00000486325 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
VTI1BP1-201ENST00000486325 DAD1P61803 113 aa9.45□□□□□ -0.9
VTI1BP1-201ENST00000486325 Q0VG73 95 aa9.45□□□□□ -0.9
VTI1BP1-201ENST00000486325 OR10J3Q5JRS4 329 aa9.45□□□□□ -0.9
VTI1BP1-201ENST00000486325 EDA2RQ9HAV5 297 aa9.45□□□□□ -0.9
VTI1BP1-201ENST00000486325 RETNQ9HD89 108 aa9.45□□□□□ -0.9
VTI1BP1-201ENST00000486325 IGHV3-53P01767 116 aa9.44□□□□□ -0.9
VTI1BP1-201ENST00000486325 SUMO4Q6EEV6 95 aa9.44□□□□□ -0.9
VTI1BP1-201ENST00000486325 IGHV3-73A0A0B4J1V6 119 aa9.43□□□□□ -0.9
VTI1BP1-201ENST00000486325 TNFRSF6BO95407 300 aa9.43□□□□□ -0.9
VTI1BP1-201ENST00000486325 S100A6P06703 90 aa9.43□□□□□ -0.9
VTI1BP1-201ENST00000486325 DEFA6Q01524 100 aa9.43□□□□□ -0.9
VTI1BP1-201ENST00000486325 ZNF479Q96JC4 524 aa9.43□□□□□ -0.9
VTI1BP1-201ENST00000486325 C20orf78Q9BR46 151 aa9.43□□□□□ -0.9
VTI1BP1-201ENST00000486325 NIT2Q9NQR4 276 aa9.43□□□□□ -0.9
VTI1BP1-201ENST00000486325 TRAV26-2A0A0B4J265 109 aa9.42□□□□□ -0.9
VTI1BP1-201ENST00000486325 TRGV4A0A0C4DH28 118 aa9.42□□□□□ -0.9
VTI1BP1-201ENST00000486325 PRSS47A8MTI9 375 aa9.42□□□□□ -0.9
VTI1BP1-201ENST00000486325 SMKR1H3BMG3 65 aa9.42□□□□□ -0.9
VTI1BP1-201ENST00000486325 M0QY20 66 aa9.42□□□□□ -0.9
VTI1BP1-201ENST00000486325 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
VTI1BP1-201ENST00000486325 C18orf32Q8TCD1 76 aa9.42□□□□□ -0.9
VTI1BP1-201ENST00000486325 DNAJC30Q96LL9 226 aa9.42□□□□□ -0.9
VTI1BP1-201ENST00000486325 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
VTI1BP1-201ENST00000486325 TRBV10-1A0A0K0K1A3 114 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 TRBV6-4A0A1B0GX49 114 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 NCR2O95944 276 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 ATP5G1P05496 136 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 NDUFA6P56556 154 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 NRACQ8N912 160 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 ST20Q9HBF5 79 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 DNHD1Q96M86 4753 aa9.41□□□□□ -0.9
VTI1BP1-201ENST00000486325 A0A0J9YWU9 116 aa9.4□□□□□ -0.9
VTI1BP1-201ENST00000486325 NPYP01303 97 aa9.4□□□□□ -0.9
VTI1BP1-201ENST00000486325 GATA1P15976 413 aaPredicted RBP9.4□□□□□ -0.9
VTI1BP1-201ENST00000486325 RPL32P62910 135 aaKnown RBP9.4□□□□□ -0.9
VTI1BP1-201ENST00000486325 FHL2Q14192 279 aa9.4□□□□□ -0.9
VTI1BP1-201ENST00000486325 COA6Q5JTJ3 125 aaKnown RBP9.4□□□□□ -0.9
VTI1BP1-201ENST00000486325 NXT2Q9NPJ8 142 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms