RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 SCGB3A1Q96QR1 104 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 MED14OSP0DP75 135 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 MUC4Q99102 2169 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 TRAV12-1A0A0B4J245 112 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 F8VRH5 84 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 H7C1H1 209 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 CFHR3Q02985 330 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 CARD19Q96LW7 228 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 PKD1L2Q7Z442 2459 aa13.15□□□□□ -0.3
TNXB-205ENST00000486148 CFAP46Q8IYW2 2715 aa13.15□□□□□ -0.3
TNXB-205ENST00000486148 NEXN-AS1Q8NBZ9 246 aa13.14□□□□□ -0.31
TNXB-205ENST00000486148 SLC25A16P16260 332 aa13.14□□□□□ -0.31
TNXB-205ENST00000486148 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.13□□□□□ -0.31
TNXB-205ENST00000486148 TRBV7-9A0A0J9YWB2 115 aa13.13□□□□□ -0.31
TNXB-205ENST00000486148 PRSS29PA6NIE9 313 aa13.13□□□□□ -0.31
TNXB-205ENST00000486148 C2orf66Q6UXQ4 117 aa13.13□□□□□ -0.31
TNXB-205ENST00000486148 ANAPC13Q9BS18 74 aa13.13□□□□□ -0.31
TNXB-205ENST00000486148 KLLNB2CW77 178 aa13.13□□□□□ -0.31
TNXB-205ENST00000486148 SFTA2Q6UW10 78 aa13.13□□□□□ -0.31
TNXB-205ENST00000486148 LINC00315P59091 139 aa13.12□□□□□ -0.31
TNXB-205ENST00000486148 DCANP1Q8TF63 244 aa13.12□□□□□ -0.31
TNXB-205ENST00000486148 BAALCQ8WXS3 180 aa13.12□□□□□ -0.31
TNXB-205ENST00000486148 JPT2Q9H910 190 aa13.12□□□□□ -0.31
TNXB-205ENST00000486148 KIF25-AS1Q9Y6Z4 181 aa13.12□□□□□ -0.31
TNXB-205ENST00000486148 NXPH4O95158 308 aa13.12□□□□□ -0.31
TNXB-205ENST00000486148 C10orf99Q6UWK7 81 aa13.12□□□□□ -0.31
TNXB-205ENST00000486148 B5MCH6 92 aa13.11□□□□□ -0.31
TNXB-205ENST00000486148 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
TNXB-205ENST00000486148 DLX4Q92988 240 aaPredicted RBP13.11□□□□□ -0.31
TNXB-205ENST00000486148 HOXA3O43365 443 aaPredicted RBP13.11□□□□□ -0.31
TNXB-205ENST00000486148 GAGE5Q13069 117 aa13.11□□□□□ -0.31
TNXB-205ENST00000486148 GAGE6Q13070 117 aa13.11□□□□□ -0.31
TNXB-205ENST00000486148 ZFP2Q6ZN57 461 aa13.11□□□□□ -0.31
TNXB-205ENST00000486148 POM121L12Q8N7R1 296 aa13.11□□□□□ -0.31
TNXB-205ENST00000486148 DEFB104AQ8WTQ1 72 aa13.11□□□□□ -0.31
TNXB-205ENST00000486148 CSPG4Q6UVK1 2322 aa13.1□□□□□ -0.31
TNXB-205ENST00000486148 FLNCQ14315 2725 aa13.1□□□□□ -0.31
TNXB-205ENST00000486148 K7EMT4 169 aa13.1□□□□□ -0.31
TNXB-205ENST00000486148 FAM159AQ6UWV7 190 aa13.1□□□□□ -0.31
TNXB-205ENST00000486148 NRGNQ92686 78 aa13.1□□□□□ -0.31
TNXB-205ENST00000486148 NHLRC4P0CG21 123 aaPredicted RBP13.09□□□□□ -0.31
TNXB-205ENST00000486148 PSMB2P49721 201 aa13.09□□□□□ -0.31
TNXB-205ENST00000486148 CRYBG3Q68DQ2 2970 aa13.09□□□□□ -0.31
TNXB-205ENST00000486148 TRAV12-3A0A0B4J271 114 aa13.09□□□□□ -0.31
TNXB-205ENST00000486148 PSMB8P28062 276 aa13.09□□□□□ -0.31
TNXB-205ENST00000486148 IGHV4-59P01825 116 aa13.08□□□□□ -0.31
TNXB-205ENST00000486148 ID1P41134 155 aa13.08□□□□□ -0.31
TNXB-205ENST00000486148 CSMD2Q7Z408 3487 aa13.08□□□□□ -0.32
TNXB-205ENST00000486148 A0A087WWL8 130 aa13.08□□□□□ -0.32
TNXB-205ENST00000486148 LINC01549A6NIU2 74 aa13.08□□□□□ -0.32
TNXB-205ENST00000486148 B4DSR2 109 aa13.08□□□□□ -0.32
TNXB-205ENST00000486148 DUSP14O95147 198 aaKnown RBP13.08□□□□□ -0.32
TNXB-205ENST00000486148 PPDPFLQ8WWR9 84 aa13.08□□□□□ -0.32
TNXB-205ENST00000486148 MYMXA0A1B0GTQ4 84 aa13.07□□□□□ -0.32
TNXB-205ENST00000486148 LINC01619G3V211 115 aa13.07□□□□□ -0.32
TNXB-205ENST00000486148 PPP1R17O96001 155 aa13.07□□□□□ -0.32
TNXB-205ENST00000486148 CD7P09564 240 aa13.07□□□□□ -0.32
TNXB-205ENST00000486148 SUMO4Q6EEV6 95 aa13.07□□□□□ -0.32
TNXB-205ENST00000486148 KIR2DL4Q99706 377 aa13.07□□□□□ -0.32
TNXB-205ENST00000486148 UTP20O75691 2785 aaKnown RBP13.07□□□□□ -0.32
TNXB-205ENST00000486148 USP9XQ93008 2570 aaPredicted RBP13.07□□□□□ -0.32
TNXB-205ENST00000486148 LOC107984156A0A0G2JMH3 177 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 ZNF688P0C7X2 276 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 DEFB112Q30KQ8 113 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 TEN1Q86WV5 123 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 ARL17AQ8IVW1 177 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 IGHV4OR15-8A0A075B7B6 117 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 A0A087WW49 117 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 DOPEY1Q5JWR5 2465 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 TSHBP01222 138 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 IGKV3-20P01619 116 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 CRYGDP07320 174 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 ZFAND6Q6FIF0 208 aa13.06□□□□□ -0.32
TNXB-205ENST00000486148 LGALS1P09382 135 aaKnown RBP13.05□□□□□ -0.32
TNXB-205ENST00000486148 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
TNXB-205ENST00000486148 POLR2KP53803 58 aaKnown RBP13.05□□□□□ -0.32
TNXB-205ENST00000486148 PRADC1Q9BSG0 188 aa13.05□□□□□ -0.32
TNXB-205ENST00000486148 TP53TG1Q9Y2A0 90 aa13.05□□□□□ -0.32
TNXB-205ENST00000486148 CITED1Q99966 193 aa13.04□□□□□ -0.32
TNXB-205ENST00000486148 UBE2D3P61077 147 aa13.04□□□□□ -0.32
TNXB-205ENST00000486148 UBE2D2P62837 147 aa13.04□□□□□ -0.32
TNXB-205ENST00000486148 ZNF580Q9UK33 172 aa13.04□□□□□ -0.32
TNXB-205ENST00000486148 F5H697 171 aa13.03□□□□□ -0.32
TNXB-205ENST00000486148 RPL39P62891 51 aaKnown RBP13.03□□□□□ -0.32
TNXB-205ENST00000486148 HERV-K104P63124 156 aa13.03□□□□□ -0.32
TNXB-205ENST00000486148 TEX29Q8N6K0 151 aa13.03□□□□□ -0.32
TNXB-205ENST00000486148 MDFICQ9P1T7 246 aa13.03□□□□□ -0.32
TNXB-205ENST00000486148 UBE2D1P51668 147 aa13.03□□□□□ -0.32
TNXB-205ENST00000486148 RPL32P62910 135 aaKnown RBP13.03□□□□□ -0.32
TNXB-205ENST00000486148 IGIPA6NJ69 53 aa13.02□□□□□ -0.32
TNXB-205ENST00000486148 EMP1P54849 157 aa13.02□□□□□ -0.32
TNXB-205ENST00000486148 PIEZO1Q92508 2521 aa13.02□□□□□ -0.33
TNXB-205ENST00000486148 IGHV3-16A0A0C4DH30 117 aa13.02□□□□□ -0.33
TNXB-205ENST00000486148 A0A0J9YX75 114 aa13.02□□□□□ -0.33
TNXB-205ENST00000486148 TCL1BO95988 128 aa13.02□□□□□ -0.33
TNXB-205ENST00000486148 FAM74A4Q5TZK3 123 aa13.02□□□□□ -0.33
TNXB-205ENST00000486148 IGSF10Q6WRI0 2623 aa13.01□□□□□ -0.33
TNXB-205ENST00000486148 IGLV4-69A0A075B6H9 119 aa13.01□□□□□ -0.33
TNXB-205ENST00000486148 C9orf85Q96MD7 179 aa13.01□□□□□ -0.33
TNXB-205ENST00000486148 SDHAF1A6NFY7 115 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms