RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 KIR2DL5BA0A0G2JPC4 375 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 SERF1AO75920 110 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 GIG44P09565 113 aaPredicted RBP6.93□□□□□ -1.3
CTSA-208ENST00000485627 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 RRN3P1Q2M238 152 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 KIR2DL5AQ8N109 375 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 KIR2DL5BQ8NHK3 375 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 PRSS3P2Q8NHM4 247 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 TMEM263Q8WUH6 116 aaKnown RBP6.93□□□□□ -1.3
CTSA-208ENST00000485627 TMEM18Q96B42 140 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 MRAP2Q96G30 205 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 C16orf74Q96GX8 76 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 LAMTOR2Q9Y2Q5 125 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 U3KQK5 164 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 CMYA5Q8N3K9 4069 aa6.93□□□□□ -1.3
CTSA-208ENST00000485627 NOTCH3Q9UM47 2321 aa6.92□□□□□ -1.3
CTSA-208ENST00000485627 F5H697 171 aa6.92□□□□□ -1.3
CTSA-208ENST00000485627 SMKR1H3BMG3 65 aa6.92□□□□□ -1.3
CTSA-208ENST00000485627 NCR2O95944 276 aa6.92□□□□□ -1.3
CTSA-208ENST00000485627 PPP1R17O96001 155 aa6.92□□□□□ -1.3
CTSA-208ENST00000485627 PRM2P04554 102 aa6.92□□□□□ -1.3
CTSA-208ENST00000485627 PIK3CD-AS1Q5SR53 167 aa6.92□□□□□ -1.3
CTSA-208ENST00000485627 RNASEKQ6P5S7 137 aaKnown RBP6.92□□□□□ -1.3
CTSA-208ENST00000485627 FA2HQ7L5A8 372 aa6.92□□□□□ -1.3
CTSA-208ENST00000485627 MAP1LC3AQ9H492 121 aa6.92□□□□□ -1.3
CTSA-208ENST00000485627 A0A087WWL8 130 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 LOC389332A0A1B0GUA5 103 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 A8MWV9 139 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 HSBP1O75506 76 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 FABP4P15090 132 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 AZU1P20160 251 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 EGFEM1PQ0D2K5 195 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 ZNF56Q15929 161 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 ANKRD39Q53RE8 183 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 FAM74A4Q5TZK3 123 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 CDPF1Q6NVV7 123 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 NIT1Q86X76 327 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 C11orf72Q8NBR9 251 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 CSNK1G2-AS1Q8NCQ2 148 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 PTH2Q96A98 100 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 NDUFAF3Q9BU61 184 aa6.91□□□□□ -1.3
CTSA-208ENST00000485627 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
CTSA-208ENST00000485627 NPYP01303 97 aa6.9□□□□□ -1.3
CTSA-208ENST00000485627 LINC00614P0C842 121 aa6.9□□□□□ -1.3
CTSA-208ENST00000485627 IGHV4-30-4P0DP06 118 aa6.9□□□□□ -1.3
CTSA-208ENST00000485627 ESDP10768 282 aa6.9□□□□□ -1.3
CTSA-208ENST00000485627 AMTP48728 403 aa6.9□□□□□ -1.3
CTSA-208ENST00000485627 LCE2CQ5TA81 110 aa6.9□□□□□ -1.3
CTSA-208ENST00000485627 ZNF705AQ6ZN79 300 aaPredicted RBP6.9□□□□□ -1.3
CTSA-208ENST00000485627 RNASE8Q8TDE3 154 aaKnown RBP6.9□□□□□ -1.3
CTSA-208ENST00000485627 CHCHD1Q96BP2 118 aaKnown RBP6.9□□□□□ -1.3
CTSA-208ENST00000485627 JPT2Q9H910 190 aa6.9□□□□□ -1.3
CTSA-208ENST00000485627 TRGV1A0A0A0MS02 117 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 TRAV26-2A0A0B4J265 109 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 SMIM9A6NGZ8 99 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 RHODO00212 210 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 NUPR1O60356 82 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 GATA1P15976 413 aaPredicted RBP6.89□□□□□ -1.31
CTSA-208ENST00000485627 PMCHP20382 165 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 KRTAP10-11P60412 298 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 OR10D4PQ8NGN7 298 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 PACRGQ96M98 296 aaPredicted RBP6.89□□□□□ -1.31
CTSA-208ENST00000485627 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 NXT2Q9NPJ8 142 aaKnown RBP6.89□□□□□ -1.31
CTSA-208ENST00000485627 AP5S1Q9NUS5 200 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 MRPL16Q9NX20 251 aaKnown RBP6.89□□□□□ -1.31
CTSA-208ENST00000485627 KIF25-AS1Q9Y6Z4 181 aa6.89□□□□□ -1.31
CTSA-208ENST00000485627 KMT2CQ8NEZ4 4911 aaKnown RBP6.88□□□□□ -1.31
CTSA-208ENST00000485627 G3V4G9 280 aa6.88□□□□□ -1.31
CTSA-208ENST00000485627 H7C1H1 209 aa6.88□□□□□ -1.31
CTSA-208ENST00000485627 CRYGDP07320 174 aa6.88□□□□□ -1.31
CTSA-208ENST00000485627 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
CTSA-208ENST00000485627 DAZ2Q13117 558 aaKnown RBP6.88□□□□□ -1.31
CTSA-208ENST00000485627 DEFB135Q30KP9 77 aa6.88□□□□□ -1.31
CTSA-208ENST00000485627 LGALS9BQ3B8N2 356 aa6.88□□□□□ -1.31
CTSA-208ENST00000485627 POM121L12Q8N7R1 296 aa6.88□□□□□ -1.31
CTSA-208ENST00000485627 RASL10AQ92737 203 aa6.88□□□□□ -1.31
CTSA-208ENST00000485627 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
CTSA-208ENST00000485627 IFITM10A6NMD0 228 aa6.87□□□□□ -1.31
CTSA-208ENST00000485627 RS1O15537 224 aa6.87□□□□□ -1.31
CTSA-208ENST00000485627 LINC00310P59036 64 aa6.87□□□□□ -1.31
CTSA-208ENST00000485627 SUMO4Q6EEV6 95 aa6.87□□□□□ -1.31
CTSA-208ENST00000485627 FAM19A2Q8N3H0 131 aa6.87□□□□□ -1.31
CTSA-208ENST00000485627 NRACQ8N912 160 aa6.87□□□□□ -1.31
CTSA-208ENST00000485627 OR4C5Q8NGB2 326 aa6.87□□□□□ -1.31
CTSA-208ENST00000485627 IL17DQ8TAD2 202 aa6.87□□□□□ -1.31
CTSA-208ENST00000485627 C20orf78Q9BR46 151 aa6.87□□□□□ -1.31
CTSA-208ENST00000485627 MUC4Q99102 2169 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 RYR3Q15413 4870 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 TRGV2A0A075B6R0 118 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 IGHV3-73A0A0B4J1V6 119 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 GAS8-AS1O95177 125 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 PRB2P02812 416 aaPredicted RBP6.86□□□□□ -1.31
CTSA-208ENST00000485627 EMP1P54849 157 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 LINC00315P59091 139 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 SUMO2P61956 95 aaKnown RBP6.86□□□□□ -1.31
CTSA-208ENST00000485627 CFAP126Q5VTH2 177 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 Q6ZWC4 215 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms