RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 FBN3Q75N90 2809 aa12.62□□□□□ -0.39
SMARCD3-212ENST00000485610 HUWE1Q7Z6Z7 4374 aaKnown RBP12.62□□□□□ -0.39
SMARCD3-212ENST00000485610 TRAV4A0A0B4J268 109 aa12.61□□□□□ -0.39
SMARCD3-212ENST00000485610 RS1O15537 224 aa12.61□□□□□ -0.39
SMARCD3-212ENST00000485610 SMIM17P0DL12 118 aa12.61□□□□□ -0.39
SMARCD3-212ENST00000485610 DAD1P61803 113 aa12.61□□□□□ -0.39
SMARCD3-212ENST00000485610 GATD1Q8NB37 220 aa12.61□□□□□ -0.39
SMARCD3-212ENST00000485610 TMEM191AQ9H0A3 160 aa12.61□□□□□ -0.39
SMARCD3-212ENST00000485610 EVI2AP22794 236 aa12.6□□□□□ -0.39
SMARCD3-212ENST00000485610 CFAP126Q5VTH2 177 aa12.6□□□□□ -0.39
SMARCD3-212ENST00000485610 C14orf178Q8N769 122 aaPredicted RBP12.6□□□□□ -0.39
SMARCD3-212ENST00000485610 OR4C5Q8NGB2 326 aa12.6□□□□□ -0.39
SMARCD3-212ENST00000485610 DPH3P1Q9H4G8 78 aa12.6□□□□□ -0.39
SMARCD3-212ENST00000485610 A0A087WWL8 130 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 RHODO00212 210 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 RAB4BP61018 213 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 FAM74A4Q5TZK3 123 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 U3KQK5 164 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 CRYGDP07320 174 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 TMEM136Q6ZRR5 245 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 SAMD10Q9BYL1 202 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 KIF25-AS1Q9Y6Z4 181 aa12.59□□□□□ -0.39
SMARCD3-212ENST00000485610 COLCA2A8K830 154 aa12.58□□□□□ -0.4
SMARCD3-212ENST00000485610 CIDEAO60543 219 aa12.58□□□□□ -0.4
SMARCD3-212ENST00000485610 HLA-DQA1P01909 254 aa12.58□□□□□ -0.4
SMARCD3-212ENST00000485610 MT-ND6P03923 174 aa12.58□□□□□ -0.4
SMARCD3-212ENST00000485610 UFSP1Q6NVU6 142 aa12.58□□□□□ -0.4
SMARCD3-212ENST00000485610 ZFP2Q6ZN57 461 aa12.58□□□□□ -0.4
SMARCD3-212ENST00000485610 C11orf45Q8TAV5 145 aa12.58□□□□□ -0.4
SMARCD3-212ENST00000485610 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
SMARCD3-212ENST00000485610 IGHV3-53P01767 116 aa12.57□□□□□ -0.4
SMARCD3-212ENST00000485610 MGPP08493 103 aa12.57□□□□□ -0.4
SMARCD3-212ENST00000485610 C12orf74Q32Q52 190 aa12.57□□□□□ -0.4
SMARCD3-212ENST00000485610 ZNF479Q96JC4 524 aa12.57□□□□□ -0.4
SMARCD3-212ENST00000485610 FAM104BQ5XKR9 115 aa12.56□□□□□ -0.4
SMARCD3-212ENST00000485610 AMN1Q8IY45 258 aa12.56□□□□□ -0.4
SMARCD3-212ENST00000485610 ATP5G1P05496 136 aa12.55□□□□□ -0.4
SMARCD3-212ENST00000485610 LINC00315P59091 139 aa12.55□□□□□ -0.4
SMARCD3-212ENST00000485610 ZNF56Q15929 161 aa12.55□□□□□ -0.4
SMARCD3-212ENST00000485610 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
SMARCD3-212ENST00000485610 RAB5AP20339 215 aa12.54□□□□□ -0.4
SMARCD3-212ENST00000485610 RNF185Q96GF1 192 aa12.54□□□□□ -0.4
SMARCD3-212ENST00000485610 F5H697 171 aa12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 NANOS2P60321 138 aaKnown RBP12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 EDA2RQ9HAV5 297 aa12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 TRGV4A0A0C4DH28 118 aa12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 RAB4AP20338 218 aa12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 RPS10P46783 165 aaKnown RBP12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 SLAQ13239 276 aa12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 Q6ZTC4 211 aa12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 MRPL18Q9H0U6 180 aaKnown RBP12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 TRAPPC1Q9Y5R8 145 aa12.53□□□□□ -0.4
SMARCD3-212ENST00000485610 APCSP02743 223 aa12.52□□□□□ -0.41
SMARCD3-212ENST00000485610 MRPL51Q4U2R6 128 aaKnown RBP12.52□□□□□ -0.41
SMARCD3-212ENST00000485610 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.52□□□□□ -0.41
SMARCD3-212ENST00000485610 FRZBQ92765 325 aa12.52□□□□□ -0.41
SMARCD3-212ENST00000485610 MRAP2Q96G30 205 aa12.52□□□□□ -0.41
SMARCD3-212ENST00000485610 GATA1P15976 413 aaPredicted RBP12.51□□□□□ -0.41
SMARCD3-212ENST00000485610 FHL2Q14192 279 aa12.51□□□□□ -0.41
SMARCD3-212ENST00000485610 SUMO4Q6EEV6 95 aa12.51□□□□□ -0.41
SMARCD3-212ENST00000485610 HTN3P15516 51 aa12.5□□□□□ -0.41
SMARCD3-212ENST00000485610 HOXA5P20719 270 aa12.5□□□□□ -0.41
SMARCD3-212ENST00000485610 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
SMARCD3-212ENST00000485610 TRAV26-2A0A0B4J265 109 aa12.49□□□□□ -0.41
SMARCD3-212ENST00000485610 F5H768 121 aa12.49□□□□□ -0.41
SMARCD3-212ENST00000485610 H7C1H1 209 aa12.49□□□□□ -0.41
SMARCD3-212ENST00000485610 K7EQD1 137 aa12.48□□□□□ -0.41
SMARCD3-212ENST00000485610 NCR2O95944 276 aa12.48□□□□□ -0.41
SMARCD3-212ENST00000485610 PPBPP02775 128 aa12.48□□□□□ -0.41
SMARCD3-212ENST00000485610 CKS2P33552 79 aa12.48□□□□□ -0.41
SMARCD3-212ENST00000485610 Q6ZSN1 163 aa12.48□□□□□ -0.41
SMARCD3-212ENST00000485610 PRO0255Q9UI72 69 aa12.48□□□□□ -0.41
SMARCD3-212ENST00000485610 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
SMARCD3-212ENST00000485610 D6R8Y8 96 aa12.47□□□□□ -0.41
SMARCD3-212ENST00000485610 M0QY20 66 aa12.47□□□□□ -0.41
SMARCD3-212ENST00000485610 RHOHQ15669 191 aa12.47□□□□□ -0.41
SMARCD3-212ENST00000485610 ORMDL3Q8N138 153 aa12.47□□□□□ -0.41
SMARCD3-212ENST00000485610 SLC25A29Q8N8R3 303 aa12.47□□□□□ -0.41
SMARCD3-212ENST00000485610 TRAV10A0A0B4J240 114 aa12.46□□□□□ -0.41
SMARCD3-212ENST00000485610 SMKR1H3BMG3 65 aa12.46□□□□□ -0.41
SMARCD3-212ENST00000485610 KIAA1644Q3SXP7 199 aa12.46□□□□□ -0.41
SMARCD3-212ENST00000485610 HHLA3Q9XRX5 114 aa12.46□□□□□ -0.41
SMARCD3-212ENST00000485610 DEFB131BA0A096LNP1 70 aa12.46□□□□□ -0.42
SMARCD3-212ENST00000485610 TRBV10-1A0A0K0K1A3 114 aa12.46□□□□□ -0.42
SMARCD3-212ENST00000485610 TRGC2P03986 189 aa12.46□□□□□ -0.42
SMARCD3-212ENST00000485610 CRYBA4P53673 196 aa12.46□□□□□ -0.42
SMARCD3-212ENST00000485610 PRADC1Q9BSG0 188 aa12.46□□□□□ -0.42
SMARCD3-212ENST00000485610 GAS8-AS1O95177 125 aa12.45□□□□□ -0.42
SMARCD3-212ENST00000485610 PPP1R17O96001 155 aa12.45□□□□□ -0.42
SMARCD3-212ENST00000485610 PRELID3AQ96N28 172 aa12.45□□□□□ -0.42
SMARCD3-212ENST00000485610 LAMTOR2Q9Y2Q5 125 aa12.45□□□□□ -0.42
SMARCD3-212ENST00000485610 TGP01266 2768 aa12.45□□□□□ -0.42
SMARCD3-212ENST00000485610 PAX4O43316 350 aa12.44□□□□□ -0.42
SMARCD3-212ENST00000485610 P0DMU3 169 aa12.44□□□□□ -0.42
SMARCD3-212ENST00000485610 FAM231AP0DMU4 169 aa12.44□□□□□ -0.42
SMARCD3-212ENST00000485610 FAM231CP0DMU5 169 aa12.44□□□□□ -0.42
SMARCD3-212ENST00000485610 OR10J3Q5JRS4 329 aa12.44□□□□□ -0.42
SMARCD3-212ENST00000485610 NRACQ8N912 160 aa12.44□□□□□ -0.42
SMARCD3-212ENST00000485610 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms