RNA–Protein interactions for RNA: ENST00000485450.5

USP4-211, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 3,541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-211ENST00000485450 FCER1GP30273 86 aa5.86□□□□□ -1.47
USP4-211ENST00000485450 MRPL51Q4U2R6 128 aaKnown RBP5.86□□□□□ -1.47
USP4-211ENST00000485450 SPATA3Q8NHX4 192 aa5.86□□□□□ -1.47
USP4-211ENST00000485450 RBAKDNA6NC62 111 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 DNAJC9-AS1A6NH13 148 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 PRSS1P07477 247 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 SAA4P35542 130 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 UBE2D1P51668 147 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 CEMP1Q6PRD7 247 aaPredicted RBP5.85□□□□□ -1.47
USP4-211ENST00000485450 AMN1Q8IY45 258 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 NPIPB3Q92617 1050 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 NAV2Q8IVL1 2488 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 FAM236AA0A1B0GUQ0 79 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 FAM236BA0A1B0GV22 79 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 NPYP01303 97 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 Q9H3A6 140 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 MYO9AB2RTY4 2548 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 LINC01549A6NIU2 74 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 DEFB112Q30KQ8 113 aa5.85□□□□□ -1.47
USP4-211ENST00000485450 IGKV1D-37A0A075B6S9 117 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 LOC107984156A0A0G2JMH3 177 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 UPK2O00526 184 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 TCL1BO95988 128 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 TMEM219Q86XT9 240 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 ARL17AQ8IVW1 177 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 THAP8Q8NA92 274 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 TRGV9Q99603 122 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 TRAV40A0A0B4J280 105 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 NCBP2LA6PVI3 153 aaKnown RBP5.84□□□□□ -1.47
USP4-211ENST00000485450 IGLV2-23P01705 113 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 GP9P14770 177 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 LEPP41159 167 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 OR13C6PQ8NH95 151 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 GNG12Q9UBI6 72 aa5.84□□□□□ -1.47
USP4-211ENST00000485450 MAST4O15021 2626 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 TRAV8-1A0A0A6YYK1 113 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 SCGB1C2P0DMR2 95 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 PRNTQ86SH4 94 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 ZNF702PQ9H963 129 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 DPM3Q9P2X0 92 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 TMSB15BA0A087X1C1 80 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 TRAV8-2A0A0B4J237 113 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 TINCRA0A1B0GVN0 87 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 INS-IGF2F8WCM5 200 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 ZNF561-AS1K7EIQ3 104 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 CKS2P33552 79 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 SRSF9Q13242 221 aaKnown RBP eCLIP5.83□□□□□ -1.48
USP4-211ENST00000485450 Q71RC1 249 aaPredicted RBP5.83□□□□□ -1.48
USP4-211ENST00000485450 C2orf48Q96LS8 159 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 OTORQ9NRC9 128 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 RP1L1Q8IWN7 2480 aaPredicted RBP5.83□□□□□ -1.48
USP4-211ENST00000485450 POLQO75417 2590 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 IGHV3-64DA0A0J9YX35 117 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 IGF1P05019 195 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 RPL35AP18077 110 aaKnown RBP5.83□□□□□ -1.48
USP4-211ENST00000485450 C3orf22Q8N5N4 141 aa5.83□□□□□ -1.48
USP4-211ENST00000485450 MRPL35Q9NZE8 188 aaKnown RBP5.83□□□□□ -1.48
USP4-211ENST00000485450 IGHV1-3A0A0C4DH29 117 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 KRTAP24-1Q3LI83 254 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 TMEM190Q8WZ59 177 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 DPH3Q96FX2 82 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 LYZL1Q6UWQ5 148 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 C5orf56Q8N8D9 126 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 C15orf53Q8NAA6 179 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 SLC25A39Q9BZJ4 359 aaPredicted RBP5.82□□□□□ -1.48
USP4-211ENST00000485450 SMKR1H3BMG3 65 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 H3BVH4 76 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 CD7P09564 240 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 PLNP26678 52 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 CRIP1P50238 77 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 PROK1P58294 105 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 LINC00336Q6ZUF6 198 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 TMEM75Q8N9X5 138 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 LINC00526Q96FQ7 95 aa5.82□□□□□ -1.48
USP4-211ENST00000485450 NXT2Q9NPJ8 142 aaKnown RBP5.82□□□□□ -1.48
USP4-211ENST00000485450 TRBV7-7A0A0K0K1E9 115 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 LGALS1P09382 135 aaKnown RBP5.81□□□□□ -1.48
USP4-211ENST00000485450 MALP21145 153 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 RUSC1-AS1Q66K80 236 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 GOLT1AQ6ZVE7 132 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 EXOC3-AS1Q8N2X6 119 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 FAM19A4Q96LR4 140 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 LINC01600Q96MT4 127 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 TNCP24821 2201 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 SLC25A20O43772 301 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 IGHG2P01859 326 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 SAA2P0DJI9 122 aaPredicted RBP5.81□□□□□ -1.48
USP4-211ENST00000485450 SFTA2Q6UW10 78 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
USP4-211ENST00000485450 ERHP84090 104 aaKnown RBP5.8□□□□□ -1.48
USP4-211ENST00000485450 NDUFA11Q86Y39 141 aa5.8□□□□□ -1.48
USP4-211ENST00000485450 C16orf92Q96LL3 132 aa5.8□□□□□ -1.48
USP4-211ENST00000485450 NDUFA4L2Q9NRX3 87 aa5.8□□□□□ -1.48
USP4-211ENST00000485450 FN1P02751 2386 aaKnown RBP5.8□□□□□ -1.48
USP4-211ENST00000485450 ADARB2-AS1A8MUL3 147 aa5.8□□□□□ -1.48
USP4-211ENST00000485450 OVOL1O14753 267 aa5.8□□□□□ -1.48
USP4-211ENST00000485450 EMP1P54849 157 aa5.8□□□□□ -1.48
USP4-211ENST00000485450 Q8N9W7 124 aa5.8□□□□□ -1.48
USP4-211ENST00000485450 AAMDCQ9H7C9 122 aa5.8□□□□□ -1.48
USP4-211ENST00000485450 H3BTX0 84 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms