RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 GATD1Q8NB37 220 aa13.18□□□□□ -0.3
ERCC2-205ENST00000485403 RASL10AQ92737 203 aa13.18□□□□□ -0.3
ERCC2-205ENST00000485403 S100A6P06703 90 aa13.17□□□□□ -0.3
ERCC2-205ENST00000485403 EVI2AP22794 236 aa13.17□□□□□ -0.3
ERCC2-205ENST00000485403 TMEM191AQ9H0A3 160 aa13.17□□□□□ -0.3
ERCC2-205ENST00000485403 JPT2Q9H910 190 aa13.17□□□□□ -0.3
ERCC2-205ENST00000485403 TRAPPC1Q9Y5R8 145 aa13.17□□□□□ -0.3
ERCC2-205ENST00000485403 HLA-DQA1P01909 254 aa13.16□□□□□ -0.3
ERCC2-205ENST00000485403 MT-ND6P03923 174 aa13.16□□□□□ -0.3
ERCC2-205ENST00000485403 C14orf178Q8N769 122 aaPredicted RBP13.16□□□□□ -0.3
ERCC2-205ENST00000485403 NDUFAF3Q9BU61 184 aa13.16□□□□□ -0.3
ERCC2-205ENST00000485403 DYNC2H1Q8NCM8 4307 aaKnown RBP13.16□□□□□ -0.3
ERCC2-205ENST00000485403 GAGE12BA1L429 117 aa13.15□□□□□ -0.3
ERCC2-205ENST00000485403 GAGE7O76087 117 aa13.15□□□□□ -0.3
ERCC2-205ENST00000485403 GAGE12FP0CL80 117 aa13.15□□□□□ -0.3
ERCC2-205ENST00000485403 GAGE12GP0CL81 117 aa13.15□□□□□ -0.3
ERCC2-205ENST00000485403 GAGE12IP0CL82 117 aa13.15□□□□□ -0.3
ERCC2-205ENST00000485403 SMIM17P0DL12 118 aa13.15□□□□□ -0.3
ERCC2-205ENST00000485403 C11orf45Q8TAV5 145 aa13.15□□□□□ -0.3
ERCC2-205ENST00000485403 FRZBQ92765 325 aa13.15□□□□□ -0.3
ERCC2-205ENST00000485403 CELA1Q9UNI1 258 aa13.15□□□□□ -0.3
ERCC2-205ENST00000485403 A0A087WWL8 130 aa13.14□□□□□ -0.31
ERCC2-205ENST00000485403 LYRM9A8MSI8 78 aa13.14□□□□□ -0.31
ERCC2-205ENST00000485403 A8MWV9 139 aa13.14□□□□□ -0.31
ERCC2-205ENST00000485403 C3orf84H3BNL1 204 aa13.14□□□□□ -0.31
ERCC2-205ENST00000485403 TRGC2P03986 189 aa13.14□□□□□ -0.31
ERCC2-205ENST00000485403 FAM222AQ5U5X8 452 aa13.14□□□□□ -0.31
ERCC2-205ENST00000485403 MRPL18Q9H0U6 180 aaKnown RBP13.14□□□□□ -0.31
ERCC2-205ENST00000485403 DPH3P1Q9H4G8 78 aa13.14□□□□□ -0.31
ERCC2-205ENST00000485403 RS1O15537 224 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 APCSP02743 223 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 FABP9Q0Z7S8 132 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 FAM104BQ5XKR9 115 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 AMN1Q8IY45 258 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 SAMD10Q9BYL1 202 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 DKK2Q9UBU2 259 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 TRGV2A0A075B6R0 118 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 C5orf52A6NGY3 159 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 MGPP08493 103 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 NANOS2P60321 138 aaKnown RBP13.13□□□□□ -0.31
ERCC2-205ENST00000485403 FAM74A4Q5TZK3 123 aa13.13□□□□□ -0.31
ERCC2-205ENST00000485403 PLECQ15149 4684 aaKnown RBP13.12□□□□□ -0.31
ERCC2-205ENST00000485403 TEX48A0A1B0GUV7 120 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 CRYGDP07320 174 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 SPART-AS1P0CW21 52 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 DEFB130BP0DP73 79 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 DEFB130AP0DP74 79 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 SLAQ13239 276 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 CFAP126Q5VTH2 177 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 LINC00612Q8N6U2 182 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 OR4C5Q8NGB2 326 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 KIF25-AS1Q9Y6Z4 181 aa13.12□□□□□ -0.31
ERCC2-205ENST00000485403 TRAV4A0A0B4J268 109 aa13.11□□□□□ -0.31
ERCC2-205ENST00000485403 PHOX2AO14813 284 aa13.11□□□□□ -0.31
ERCC2-205ENST00000485403 RAB4AP20338 218 aa13.11□□□□□ -0.31
ERCC2-205ENST00000485403 SNRPEP62304 92 aaKnown RBP13.11□□□□□ -0.31
ERCC2-205ENST00000485403 C12orf74Q32Q52 190 aa13.1□□□□□ -0.31
ERCC2-205ENST00000485403 KIAA1644Q3SXP7 199 aa13.1□□□□□ -0.31
ERCC2-205ENST00000485403 POM121L12Q8N7R1 296 aa13.1□□□□□ -0.31
ERCC2-205ENST00000485403 IGHV3-73A0A0B4J1V6 119 aa13.09□□□□□ -0.31
ERCC2-205ENST00000485403 F5H697 171 aa13.09□□□□□ -0.31
ERCC2-205ENST00000485403 RHODO00212 210 aa13.09□□□□□ -0.31
ERCC2-205ENST00000485403 IGHV3-53P01767 116 aa13.09□□□□□ -0.31
ERCC2-205ENST00000485403 LINC00315P59091 139 aa13.09□□□□□ -0.31
ERCC2-205ENST00000485403 MRPL51Q4U2R6 128 aaKnown RBP13.09□□□□□ -0.31
ERCC2-205ENST00000485403 CASC10Q5T4H9 136 aa13.09□□□□□ -0.31
ERCC2-205ENST00000485403 HIST1H2BKO60814 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST1H2BJP06899 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST1H2BOP23527 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST1H2BBP33778 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST1H2BDP58876 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 DAD1P61803 113 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST1H2BCP62807 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 ZNF56Q15929 161 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST2H2BEQ16778 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.08□□□□□ -0.31
ERCC2-205ENST00000485403 UFSP1Q6NVU6 142 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST1H2BHQ93079 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST1H2BNQ99877 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 HIST1H2BMQ99879 126 aa13.08□□□□□ -0.31
ERCC2-205ENST00000485403 ZFAND6Q6FIF0 208 aa13.08□□□□□ -0.32
ERCC2-205ENST00000485403 ZFP2Q6ZN57 461 aa13.08□□□□□ -0.32
ERCC2-205ENST00000485403 Q6ZTC4 211 aa13.08□□□□□ -0.32
ERCC2-205ENST00000485403 ZNF479Q96JC4 524 aa13.08□□□□□ -0.32
ERCC2-205ENST00000485403 PHLDA1Q8WV24 401 aaPredicted RBP13.07□□□□□ -0.32
ERCC2-205ENST00000485403 C18orf15Q96N68 181 aa13.07□□□□□ -0.32
ERCC2-205ENST00000485403 TRAV26-2A0A0B4J265 109 aa13.06□□□□□ -0.32
ERCC2-205ENST00000485403 CKS2P33552 79 aa13.06□□□□□ -0.32
ERCC2-205ENST00000485403 NDUFA6P56556 154 aa13.06□□□□□ -0.32
ERCC2-205ENST00000485403 MRAP2Q96G30 205 aa13.06□□□□□ -0.32
ERCC2-205ENST00000485403 NUPR2A6NF83 97 aa13.05□□□□□ -0.32
ERCC2-205ENST00000485403 D6R8Y8 96 aa13.05□□□□□ -0.32
ERCC2-205ENST00000485403 SMKR1H3BMG3 65 aa13.05□□□□□ -0.32
ERCC2-205ENST00000485403 CIDEAO60543 219 aa13.05□□□□□ -0.32
ERCC2-205ENST00000485403 SUMO4Q6EEV6 95 aa13.05□□□□□ -0.32
ERCC2-205ENST00000485403 KMT2CQ8NEZ4 4911 aaKnown RBP13.05□□□□□ -0.32
ERCC2-205ENST00000485403 NCR2O95944 276 aa13.04□□□□□ -0.32
ERCC2-205ENST00000485403 HOXA5P20719 270 aa13.04□□□□□ -0.32
ERCC2-205ENST00000485403 CEMP1Q6PRD7 247 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms