RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 IGLV5-52A0A0A0MRZ9 124 aa8.72□□□□□ -1.01
HDAC6-227ENST00000485102 TRAV34A0A0B4J273 112 aa8.72□□□□□ -1.01
HDAC6-227ENST00000485102 IBA57-AS1B1ANH7 110 aa8.72□□□□□ -1.01
HDAC6-227ENST00000485102 RPS20P60866 119 aaKnown RBP8.71□□□□□ -1.02
HDAC6-227ENST00000485102 CENPWQ5EE01 88 aa8.71□□□□□ -1.02
HDAC6-227ENST00000485102 MUC21Q5SSG8 566 aa8.71□□□□□ -1.02
HDAC6-227ENST00000485102 LINC00479Q96M42 142 aa8.71□□□□□ -1.02
HDAC6-227ENST00000485102 MLST8Q9BVC4 326 aa8.71□□□□□ -1.02
HDAC6-227ENST00000485102 PARLQ9H300 379 aa8.71□□□□□ -1.02
HDAC6-227ENST00000485102 ZNF727A8MUV8 499 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 M0R2P5 195 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 PSCAO43653 123 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 CXCL1P09341 107 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 IFITM2Q01629 132 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 ZNF674Q2M3X9 581 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 Q8N814 137 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 OR4C5Q8NGB2 326 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 SGK494Q96LW2 274 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 SMIM7Q9BQ49 75 aa8.7□□□□□ -1.02
HDAC6-227ENST00000485102 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-227ENST00000485102 J3QL48 77 aa8.69□□□□□ -1.02
HDAC6-227ENST00000485102 CIDEAO60543 219 aa8.69□□□□□ -1.02
HDAC6-227ENST00000485102 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
HDAC6-227ENST00000485102 GATA1P15976 413 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-227ENST00000485102 TVP23CQ96ET8 276 aa8.69□□□□□ -1.02
HDAC6-227ENST00000485102 FAM30AQ9NZY2 134 aa8.69□□□□□ -1.02
HDAC6-227ENST00000485102 MGST1P10620 155 aaKnown RBP8.68□□□□□ -1.02
HDAC6-227ENST00000485102 S100A4P26447 101 aaKnown RBP8.68□□□□□ -1.02
HDAC6-227ENST00000485102 CEBPGP53567 150 aa8.68□□□□□ -1.02
HDAC6-227ENST00000485102 HAMPP81172 84 aa8.68□□□□□ -1.02
HDAC6-227ENST00000485102 PNRC1Q12796 327 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-227ENST00000485102 LAGE3Q14657 143 aa8.68□□□□□ -1.02
HDAC6-227ENST00000485102 TMEM241Q24JQ0 296 aa8.68□□□□□ -1.02
HDAC6-227ENST00000485102 PIK3CD-AS1Q5SR53 167 aa8.68□□□□□ -1.02
HDAC6-227ENST00000485102 Q6ZSA8 131 aa8.68□□□□□ -1.02
HDAC6-227ENST00000485102 NAGKQ9UJ70 344 aa8.68□□□□□ -1.02
HDAC6-227ENST00000485102 TRAV8-6A0A0B4J262 113 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 IGHV3-16A0A0C4DH30 117 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 B4DEV8 164 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 P01737 135 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 ASIPP42127 132 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 DNLZQ5SXM8 178 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 ZC2HC1AQ96GY0 325 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 NAT8Q9UHE5 227 aa8.67□□□□□ -1.02
HDAC6-227ENST00000485102 TRBV6-4A0A1B0GX49 114 aa8.66□□□□□ -1.02
HDAC6-227ENST00000485102 LINC00862A6NCI5 91 aa8.66□□□□□ -1.02
HDAC6-227ENST00000485102 GNRH2O43555 120 aa8.66□□□□□ -1.02
HDAC6-227ENST00000485102 SH2D1AO60880 128 aa8.66□□□□□ -1.02
HDAC6-227ENST00000485102 PLA2G1BP04054 148 aaKnown RBP8.66□□□□□ -1.02
HDAC6-227ENST00000485102 C15orf54Q8N8G6 183 aa8.66□□□□□ -1.02
HDAC6-227ENST00000485102 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
HDAC6-227ENST00000485102 PTH2Q96A98 100 aa8.66□□□□□ -1.02
HDAC6-227ENST00000485102 DERL1Q9BUN8 251 aa8.66□□□□□ -1.02
HDAC6-227ENST00000485102 NDUFA5Q16718 116 aa8.65□□□□□ -1.02
HDAC6-227ENST00000485102 LELP1Q5T871 98 aa8.65□□□□□ -1.02
HDAC6-227ENST00000485102 PRR27Q6MZM9 219 aa8.65□□□□□ -1.02
HDAC6-227ENST00000485102 FAM231DQ6ZW35 169 aa8.65□□□□□ -1.02
HDAC6-227ENST00000485102 SLC25A29Q8N8R3 303 aa8.65□□□□□ -1.02
HDAC6-227ENST00000485102 NHLRC2Q8NBF2 726 aa8.65□□□□□ -1.02
HDAC6-227ENST00000485102 DEFB104AQ8WTQ1 72 aa8.65□□□□□ -1.02
HDAC6-227ENST00000485102 TM2D2Q9BX73 214 aa8.65□□□□□ -1.02
HDAC6-227ENST00000485102 F2Z2F3 143 aa8.64□□□□□ -1.03
HDAC6-227ENST00000485102 PPP1R2P9O14990 202 aa8.64□□□□□ -1.03
HDAC6-227ENST00000485102 ZNF80P51504 273 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-227ENST00000485102 CT83Q5H943 113 aa8.64□□□□□ -1.03
HDAC6-227ENST00000485102 IL36BQ9NZH7 164 aa8.64□□□□□ -1.03
HDAC6-227ENST00000485102 FAM231BA6NCW3 169 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 A8MWL6 223 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 KRBOX1C9JBD0 128 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 RS1O15537 224 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 TYMSP04818 313 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 RHOHQ15669 191 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 OR10J3Q5JRS4 329 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 LINC01551Q86U37 167 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 COMMD7Q86VX2 200 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 OCC1Q8TAD7 63 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 PRADC1Q9BSG0 188 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 GTSF1LQ9H1H1 148 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 Q9HAA7 133 aa8.63□□□□□ -1.03
HDAC6-227ENST00000485102 TRBV20OR9-2A0A075B6H5 130 aa8.62□□□□□ -1.03
HDAC6-227ENST00000485102 C19orf71A6NCJ1 209 aa8.62□□□□□ -1.03
HDAC6-227ENST00000485102 IGLV2-8P01709 118 aa8.62□□□□□ -1.03
HDAC6-227ENST00000485102 CFAP126Q5VTH2 177 aa8.62□□□□□ -1.03
HDAC6-227ENST00000485102 BORCS7Q96B45 105 aa8.62□□□□□ -1.03
HDAC6-227ENST00000485102 RPP21Q9H633 154 aaKnown RBP8.62□□□□□ -1.03
HDAC6-227ENST00000485102 OSTCQ9NRP0 149 aa8.62□□□□□ -1.03
HDAC6-227ENST00000485102 PHLDA3Q9Y5J5 127 aa8.62□□□□□ -1.03
HDAC6-227ENST00000485102 LRP1Q07954 4544 aaKnown RBP8.62□□□□□ -1.03
HDAC6-227ENST00000485102 TRAV8-3A0A0A6YYJ7 113 aa8.61□□□□□ -1.03
HDAC6-227ENST00000485102 IGKV3D-20A0A0C4DH25 116 aa8.61□□□□□ -1.03
HDAC6-227ENST00000485102 GATCO43716 136 aaKnown RBP8.61□□□□□ -1.03
HDAC6-227ENST00000485102 OR5AL1P0C617 328 aa8.61□□□□□ -1.03
HDAC6-227ENST00000485102 CRIP1P50238 77 aa8.61□□□□□ -1.03
HDAC6-227ENST00000485102 CACNG7P62955 275 aa8.61□□□□□ -1.03
HDAC6-227ENST00000485102 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
HDAC6-227ENST00000485102 SERTAD4-AS1Q5TG53 156 aa8.61□□□□□ -1.03
HDAC6-227ENST00000485102 WDR73Q6P4I2 378 aa8.61□□□□□ -1.03
HDAC6-227ENST00000485102 ZFP82Q8N141 532 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms