RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 C10orf55Q5SWW7 151 aa1.33□□□□□ -2.2
SGIP1-211ENST00000484988 HCP5Q6MZN7 132 aa1.33□□□□□ -2.2
SGIP1-211ENST00000484988 SLIT2O94813 1529 aa1.33□□□□□ -2.2
SGIP1-211ENST00000484988 PCNX2A6NKB5 2137 aa1.33□□□□□ -2.2
SGIP1-211ENST00000484988 ANK1P16157 1881 aa1.33□□□□□ -2.2
SGIP1-211ENST00000484988 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.32□□□□□ -2.2
SGIP1-211ENST00000484988 A2ML1A8K2U0 1454 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 CASZ1Q86V15 1759 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 ADGRB3O60242 1522 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 FN1P02751 2386 aaKnown RBP1.32□□□□□ -2.2
SGIP1-211ENST00000484988 A0A0G2JND7 137 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 TRBV10-1A0A0K0K1A3 114 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 NUPR2A6NF83 97 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 NAP1L6A6NFF2 107 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 SSSCA1O60232 199 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 PPP1R17O96001 155 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 SSBP1Q04837 148 aaKnown RBP1.32□□□□□ -2.2
SGIP1-211ENST00000484988 SPATA45Q537H7 98 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 COMMD6Q7Z4G1 85 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 PATE1Q8WXA2 126 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 BAZ1AQ9NRL2 1556 aaPredicted RBP1.32□□□□□ -2.2
SGIP1-211ENST00000484988 INTS1Q8N201 2190 aaKnown RBP1.32□□□□□ -2.2
SGIP1-211ENST00000484988 LRP5O75197 1615 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 COL4A2P08572 1712 aa1.32□□□□□ -2.2
SGIP1-211ENST00000484988 GOLGA3Q08378 1498 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 PLEKHH2Q8IVE3 1493 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 COL5A1P20908 1838 aaPredicted RBP1.31□□□□□ -2.2
SGIP1-211ENST00000484988 HIGD1CA8MV81 97 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 NUPR1O60356 82 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 ATP5EP56381 51 aaPredicted RBP1.31□□□□□ -2.2
SGIP1-211ENST00000484988 EDDM3BP56851 147 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 RPL37AP61513 92 aaKnown RBP1.31□□□□□ -2.2
SGIP1-211ENST00000484988 ZNF56Q15929 161 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.31□□□□□ -2.2
SGIP1-211ENST00000484988 SBSPONQ8IVN8 264 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 DMAC1Q96GE9 116 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 MGST2Q99735 147 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 NPVFQ9HCQ7 196 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 NXT2Q9NPJ8 142 aaKnown RBP1.31□□□□□ -2.2
SGIP1-211ENST00000484988 CUL7Q14999 1698 aa1.31□□□□□ -2.2
SGIP1-211ENST00000484988 CPSF1Q10570 1443 aaKnown RBP1.31□□□□□ -2.2
SGIP1-211ENST00000484988 CDK12Q9NYV4 1490 aaPredicted RBP1.31□□□□□ -2.2
SGIP1-211ENST00000484988 CASP8AP2Q9UKL3 1982 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 PRDM2Q13029 1718 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 COL24A1Q17RW2 1714 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 ARAP2Q8WZ64 1704 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 UQCRHLA0A096LP55 91 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 CTXND1A0A1B0GTU2 59 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 IGKV2-29A2NJV5 120 aaPredicted RBP1.3□□□□□ -2.2
SGIP1-211ENST00000484988 IGLV3-1P01715 115 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 IGLC1P0CG04 106 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 ASIPP42127 132 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 SPAG11BQ08648 103 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 SPAG11AQ6PDA7 123 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 LINC00322Q6ZN03 302 aaPredicted RBP1.3□□□□□ -2.2
SGIP1-211ENST00000484988 ZNF720Q7Z2F6 126 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 S100A16Q96FQ6 103 aaKnown RBP1.3□□□□□ -2.2
SGIP1-211ENST00000484988 UQCR10Q9UDW1 63 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 MYLKQ15746 1914 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 ZNF609O15014 1411 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 VPS8Q8N3P4 1428 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 SCAPERQ9BY12 1400 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 NSD3Q9BZ95 1437 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 MED13Q9UHV7 2174 aa1.3□□□□□ -2.2
SGIP1-211ENST00000484988 KIDINS220Q9ULH0 1771 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 FBN1P35555 2871 aaKnown RBP1.29□□□□□ -2.2
SGIP1-211ENST00000484988 MYO18AQ92614 2054 aaKnown RBP1.29□□□□□ -2.2
SGIP1-211ENST00000484988 IGKV3-7A0A075B6H7 116 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 TRAV2A0A0B4J234 112 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 CXorf51AA0A1B0GTR3 108 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 M0R3E3 92 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 IGHV3-33P01772 117 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 UQCRHP07919 91 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 Q0VG73 95 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 PYY3Q5JQD4 70 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 TMEM170BQ5T4T1 132 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 FAM74A4Q5TZK3 123 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 ALKAL2Q6UX46 152 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 ZNF818PQ6ZRF7 136 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 LINC00299Q6ZSB3 139 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 LINC00208Q96KT6 92 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 OBSCN-AS1Q96MR7 158 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 ODF3Q96PU9 254 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 S100A13Q99584 98 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 USP54Q70EL1 1684 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 DOCK1Q14185 1865 aa1.29□□□□□ -2.2
SGIP1-211ENST00000484988 BRWD1Q9NSI6 2320 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 TRBV7-3A0A075B6L6 115 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 IGLV3-32A0A0A0MS00 114 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 H3BQF6 201 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 ATOX1O00244 68 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 SIX6O95475 246 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 CCL8P80075 99 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 Q6ZRN7 208 aaPredicted RBP1.28□□□□□ -2.2
SGIP1-211ENST00000484988 COX7B2Q8TF08 81 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 ARL2-SNX15V9GYD0 113 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 V9GYH0 126 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 V9GYV3 84 aa1.28□□□□□ -2.2
SGIP1-211ENST00000484988 NISCHQ9Y2I1 1504 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms