RNA–Protein interactions for RNA: ENST00000484746.1

ATP2B4-207, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best)

Gene ATP2B4, Length 4,697 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-207ENST00000484746 SCGB1C2P0DMR2 95 aa4.33□□□□□ -1.72
ATP2B4-207ENST00000484746 KLF5Q13887 457 aaPredicted RBP4.33□□□□□ -1.72
ATP2B4-207ENST00000484746 VCX2Q9H322 139 aa4.33□□□□□ -1.72
ATP2B4-207ENST00000484746 COL27A1Q8IZC6 1860 aaPredicted RBP4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 A0A087WWL8 130 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 TRGV1A0A0A0MS02 117 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 Q8N8P6 123 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 TMEM158Q8WZ71 300 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 ZFAND3Q9H8U3 227 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 DKK2Q9UBU2 259 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 KLK9Q9UKQ9 250 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 TRAV12-2A0A075B6T6 113 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 MT-ATP8P03928 68 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 ZNF747Q9BV97 191 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 XCL2Q9UBD3 114 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 SORL1Q92673 2214 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 IGKCP01834 107 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 HIST1H4GQ99525 98 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 ZZEF1O43149 2961 aa4.32□□□□□ -1.72
ATP2B4-207ENST00000484746 GAGE12JA6NER3 117 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 DNAJC9-AS1A6NH13 148 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 GAGE7O76087 117 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 GAGE12FP0CL80 117 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 GAGE12GP0CL81 117 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 GAGE12IP0CL82 117 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 MYCNOSP40205 109 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 SUMO2P61956 95 aaKnown RBP4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 RPL36AP83881 106 aaKnown RBP4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 GAGE4Q13068 117 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 TRPT1Q86TN4 253 aaKnown RBP4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 C4orf3Q8WVX3 66 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 RPL36ALQ969Q0 106 aaKnown RBP4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 C20orf78Q9BR46 151 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 MLST8Q9BVC4 326 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 A8MWV9 139 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 PLA2G2AP14555 144 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 TRAV25A0A0B4J276 109 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 M0QXV9 152 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 NPYP01303 97 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 SRSF2Q01130 221 aaKnown RBP4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 LINC01545Q5VT33 79 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 BBC3Q96PG8 261 aaPredicted RBP4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 SIGLEC8Q9NYZ4 499 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 TNRC18O15417 2968 aaPredicted RBP4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 A0A1B0GXF2 115 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 BRI3O95415 125 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 PRADC1Q9BSG0 188 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 MYO18BQ8IUG5 2567 aa4.31□□□□□ -1.72
ATP2B4-207ENST00000484746 TRBV20-1A0A075B6N2 111 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 IGKV2D-26A0A0A0MRZ7 120 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 LGALS9O00182 355 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 GNRH2O43555 120 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 CIRBPQ14011 172 aaKnown RBP4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 C3orf56Q8N813 242 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 TMEM262E9PQX1 116 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 AVPP01185 164 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 CD28P10747 220 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 DEFB104AQ8WTQ1 72 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 PKD1L2Q7Z442 2459 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 CLPSL1A2RUU4 121 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 CRXO43186 299 aaPredicted RBP4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 PSMB2P49721 201 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 KRTAP10-9P60411 292 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 HIST2H2BCQ6DN03 193 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 SMIM2Q9BVW6 85 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 PRSS29PA6NIE9 313 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 CRIP2P52943 208 aaPredicted RBP4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 Q6ZUT4 128 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 PSMG3-AS1Q96PY0 264 aa4.3□□□□□ -1.72
ATP2B4-207ENST00000484746 LOC107984156A0A0G2JMH3 177 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 SNCGO76070 127 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 PLNP26678 52 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 C5orf47Q569G3 176 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 RNF152Q8N8N0 203 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 PRRC2AP48634 2157 aaKnown RBP4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 IGKV3OR2-268A0A0C4DH90 116 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 IGLV1-40P01703 118 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 PRSS2P07478 247 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 MED14OSP0DP75 135 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 FGF6P10767 208 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 HTN3P15516 51 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 GAGE2BQ13066 116 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 GAGE2EQ4V326 116 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 PTH2Q96A98 100 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 GAGE2DQ9UEU5 116 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 SMAD5-AS1Q9Y6J3 95 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 IGHV3-53P01767 116 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 PSMB8P28062 276 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 MRGPRG-AS1Q2M3A8 158 aa4.29□□□□□ -1.72
ATP2B4-207ENST00000484746 TRAV26-2A0A0B4J265 109 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 A0A0J9YX75 114 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 SDHAF1A6NFY7 115 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 M0R2P5 195 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 ZC2HC1BQ5TFG8 222 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 C2orf66Q6UXQ4 117 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms