RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 TAF9BQ9HBM6 251 aa3.25□□□□□ -1.89
UBR3-210ENST00000484596 CBLN4Q9NTU7 201 aa3.25□□□□□ -1.89
UBR3-210ENST00000484596 ZFP30Q9Y2G7 519 aa3.25□□□□□ -1.89
UBR3-210ENST00000484596 CADP27708 2225 aa3.25□□□□□ -1.89
UBR3-210ENST00000484596 USF3Q68DE3 2245 aa3.25□□□□□ -1.89
UBR3-210ENST00000484596 TGP01266 2768 aa3.25□□□□□ -1.89
UBR3-210ENST00000484596 MALRD1Q5VYJ5 2156 aa3.25□□□□□ -1.89
UBR3-210ENST00000484596 RYR2Q92736 4967 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 PLECQ15149 4684 aaKnown RBP3.24□□□□□ -1.89
UBR3-210ENST00000484596 IGLV10-54A0A075B6I4 117 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 TRAV38-1A0A0B4J264 116 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 A0A1W2PNM2 257 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 ARRDC5A6NEK1 342 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 NPFFO15130 113 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 P0C880 135 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 ZNF728P0DKX0 622 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 NCMAPQ5T1S8 102 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 AADACL3Q5VUY0 350 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 ZNF322Q6U7Q0 402 aaPredicted RBP3.24□□□□□ -1.89
UBR3-210ENST00000484596 TEX261Q6UWH6 196 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 SSX8Q7RTT4 187 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 CROCCP2Q86T23 111 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 RPS19BP1Q86WX3 136 aaKnown RBP3.24□□□□□ -1.89
UBR3-210ENST00000484596 TTTY12Q9BZ98 90 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 FAIMQ9NVQ4 179 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 BAIAP2Q9UQB8 552 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 VWFP04275 2813 aa3.24□□□□□ -1.89
UBR3-210ENST00000484596 HIVEP2P31629 2446 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 TMEM212A6NML5 194 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 C17orf51A8MQB3 221 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 TMEM256-PLSCR3K7ERE1 68 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 UBFD1O14562 309 aaKnown RBP3.23□□□□□ -1.89
UBR3-210ENST00000484596 NDUFB2O95178 105 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 C1QAP02745 245 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 GPX1P07203 203 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 CXCL1P09341 107 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 HIST1H2BOP23527 126 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 COL8A2P25067 703 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 HIST1H2BBP33778 126 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 HIST1H2BDP58876 126 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 TAS2R20P59543 309 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 PKIAP61925 76 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 HIST1H2BCP62807 126 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 HIST2H2BEQ16778 126 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.23□□□□□ -1.89
UBR3-210ENST00000484596 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.23□□□□□ -1.89
UBR3-210ENST00000484596 BRD3OSQ6XYD6 125 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 SPATA12Q7Z6I5 190 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 CTAGE3PQ8IX95 158 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 TEX29Q8N6K0 151 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 TCTEX1D1Q8N7M0 179 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 RPS4Y2Q8TD47 263 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 HIST1H2BHQ93079 126 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 HIST1H2BNQ99877 126 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 HIST1H2BMQ99879 126 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 DERL1Q9BUN8 251 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 TMEM133Q9H2Q1 129 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 TUBA4BQ9H853 241 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 CKLFQ9UBR5 152 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 KLK5Q9Y337 293 aaPredicted RBP3.23□□□□□ -1.89
UBR3-210ENST00000484596 HSPE1-MOB4S4R3N1 261 aa3.23□□□□□ -1.89
UBR3-210ENST00000484596 ARFGEF3Q5TH69 2177 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 IGKV1-9A0A0C4DH69 117 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 FAM236AA0A1B0GUQ0 79 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 FAM236BA0A1B0GV22 79 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 G3V3Q6 166 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 NAPSAO96009 420 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 CTSGP08311 255 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 RPL30P62888 115 aaKnown RBP3.22□□□□□ -1.89
UBR3-210ENST00000484596 CCL20P78556 96 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 BCL2L15Q5TBC7 163 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 BRK1Q8WUW1 75 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 PSMG3Q9BT73 122 aaPredicted RBP3.22□□□□□ -1.89
UBR3-210ENST00000484596 ZNF471Q9BX82 626 aaPredicted RBP3.22□□□□□ -1.89
UBR3-210ENST00000484596 RNF122Q9H9V4 155 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 TXNL4BQ9NX01 149 aaKnown RBP3.22□□□□□ -1.89
UBR3-210ENST00000484596 IL36BQ9NZH7 164 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 FUT9Q9Y231 359 aa3.22□□□□□ -1.89
UBR3-210ENST00000484596 DYNC2H1Q8NCM8 4307 aaKnown RBP3.22□□□□□ -1.89
UBR3-210ENST00000484596 EPPK1P58107 5090 aaKnown RBP3.21□□□□□ -1.9
UBR3-210ENST00000484596 UQCRHLA0A096LP55 91 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 GGT3PA6NGU5 568 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 ZNF670-ZNF695F2Z2N8 137 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 J3QR89 54 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 M0R143 59 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 IGHV1-69P01742 117 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 PRM2P04554 102 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 UQCRHP07919 91 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 SDC2P34741 201 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 DIAPH2-AS1Q14236 149 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 ZNF791Q3KP31 576 aaPredicted RBP3.21□□□□□ -1.9
UBR3-210ENST00000484596 CNEP1R1Q8N9A8 125 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.21□□□□□ -1.9
UBR3-210ENST00000484596 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
UBR3-210ENST00000484596 CHCHD2Q9Y6H1 151 aaPredicted RBP3.21□□□□□ -1.9
UBR3-210ENST00000484596 ALPK2Q86TB3 2170 aa3.2□□□□□ -1.9
UBR3-210ENST00000484596 TRBV7-6A0A0J9YX20 115 aa3.2□□□□□ -1.9
UBR3-210ENST00000484596 DEFB108AA8MXU0 73 aa3.2□□□□□ -1.9
UBR3-210ENST00000484596 IFNA17P01571 189 aa3.2□□□□□ -1.9
UBR3-210ENST00000484596 FABP2P12104 132 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms