RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 LGALS9O00182 355 aa14.69□□□□□ -0.06
LIMS2-215ENST00000484252 DUSP14O95147 198 aaKnown RBP14.69□□□□□ -0.06
LIMS2-215ENST00000484252 SNRPD3P62318 126 aaKnown RBP14.69□□□□□ -0.06
LIMS2-215ENST00000484252 ETDBQ3ZM63 59 aa14.69□□□□□ -0.06
LIMS2-215ENST00000484252 C9orf85Q96MD7 179 aa14.69□□□□□ -0.06
LIMS2-215ENST00000484252 MRPL16Q9NX20 251 aaKnown RBP14.69□□□□□ -0.06
LIMS2-215ENST00000484252 TP53TG1Q9Y2A0 90 aa14.69□□□□□ -0.06
LIMS2-215ENST00000484252 IGIPA6NJ69 53 aa14.69□□□□□ -0.06
LIMS2-215ENST00000484252 TMEM95Q3KNT9 176 aa14.69□□□□□ -0.06
LIMS2-215ENST00000484252 SYT8Q8NBV8 401 aa14.69□□□□□ -0.06
LIMS2-215ENST00000484252 A0A0J9YX75 114 aa14.68□□□□□ -0.06
LIMS2-215ENST00000484252 H3BMG7 143 aa14.68□□□□□ -0.06
LIMS2-215ENST00000484252 HERVK_113P61574 105 aa14.68□□□□□ -0.06
LIMS2-215ENST00000484252 PMVKQ15126 192 aa14.68□□□□□ -0.06
LIMS2-215ENST00000484252 TIMM17AQ99595 171 aa14.68□□□□□ -0.06
LIMS2-215ENST00000484252 IGHV3-16A0A0C4DH30 117 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 F5H697 171 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 CRYGDP07320 174 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 ATP6V0E2Q8NHE4 81 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 TRBV27A0A0K0K1C4 114 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 ZNF815PA8K554 130 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 IGHV4-59P01825 116 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 ZNF688P0C7X2 276 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 RRN3P1Q2M238 152 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 DEFB112Q30KQ8 113 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 SH2D6Q7Z4S9 175 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 JPT2Q9H910 190 aa14.67□□□□□ -0.06
LIMS2-215ENST00000484252 A0A087WWL8 130 aa14.66□□□□□ -0.06
LIMS2-215ENST00000484252 K7EQG2 157 aa14.66□□□□□ -0.06
LIMS2-215ENST00000484252 TSHBP01222 138 aa14.66□□□□□ -0.06
LIMS2-215ENST00000484252 COX6B1P14854 86 aa14.66□□□□□ -0.06
LIMS2-215ENST00000484252 LINC01356Q8N9X3 169 aa14.66□□□□□ -0.06
LIMS2-215ENST00000484252 PRO0461Q9UI25 63 aa14.66□□□□□ -0.06
LIMS2-215ENST00000484252 ZFHX3Q15911 3703 aa14.66□□□□□ -0.06
LIMS2-215ENST00000484252 VPS13CQ709C8 3753 aa14.66□□□□□ -0.06
LIMS2-215ENST00000484252 MUC4Q99102 2169 aa14.65□□□□□ -0.06
LIMS2-215ENST00000484252 SPTAN1Q13813 2472 aaKnown RBP14.65□□□□□ -0.06
LIMS2-215ENST00000484252 IGLV4-69A0A075B6H9 119 aa14.65□□□□□ -0.06
LIMS2-215ENST00000484252 SDHAF1A6NFY7 115 aa14.65□□□□□ -0.06
LIMS2-215ENST00000484252 A6NJY4 79 aa14.65□□□□□ -0.06
LIMS2-215ENST00000484252 J3QLI3 93 aa14.65□□□□□ -0.06
LIMS2-215ENST00000484252 Q5PR19 223 aa14.65□□□□□ -0.06
LIMS2-215ENST00000484252 WFDC12Q8WWY7 111 aa14.65□□□□□ -0.06
LIMS2-215ENST00000484252 CFAP46Q8IYW2 2715 aa14.65□□□□□ -0.06
LIMS2-215ENST00000484252 GEMIN7Q9H840 131 aaKnown RBP14.64□□□□□ -0.07
LIMS2-215ENST00000484252 PIEZO1Q92508 2521 aa14.64□□□□□ -0.07
LIMS2-215ENST00000484252 TRAV26-1A0A087WT03 109 aa14.64□□□□□ -0.07
LIMS2-215ENST00000484252 C11orf86A6NJI1 115 aa14.64□□□□□ -0.07
LIMS2-215ENST00000484252 CACNA1AO00555 2505 aa14.64□□□□□ -0.07
LIMS2-215ENST00000484252 HOXA3O43365 443 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-215ENST00000484252 CRYBA4P53673 196 aa14.63□□□□□ -0.07
LIMS2-215ENST00000484252 SCGB1D4Q6XE38 83 aa14.63□□□□□ -0.07
LIMS2-215ENST00000484252 ZNF418Q8TF45 676 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-215ENST00000484252 IGHV1OR15-1A0A075B7D0 117 aa14.62□□□□□ -0.07
LIMS2-215ENST00000484252 APOMO95445 188 aa14.62□□□□□ -0.07
LIMS2-215ENST00000484252 RNF152Q8N8N0 203 aa14.62□□□□□ -0.07
LIMS2-215ENST00000484252 RHOHQ15669 191 aa14.62□□□□□ -0.07
LIMS2-215ENST00000484252 VCX2Q9H322 139 aa14.62□□□□□ -0.07
LIMS2-215ENST00000484252 MDFICQ9P1T7 246 aa14.62□□□□□ -0.07
LIMS2-215ENST00000484252 CELSR1Q9NYQ6 3014 aa14.62□□□□□ -0.07
LIMS2-215ENST00000484252 TRPT1Q86TN4 253 aaKnown RBP14.61□□□□□ -0.07
LIMS2-215ENST00000484252 Q8N1Y9 231 aa14.61□□□□□ -0.07
LIMS2-215ENST00000484252 COL12A1Q99715 3063 aa14.61□□□□□ -0.07
LIMS2-215ENST00000484252 M0QY20 66 aa14.61□□□□□ -0.07
LIMS2-215ENST00000484252 RPL39P62891 51 aaKnown RBP14.61□□□□□ -0.07
LIMS2-215ENST00000484252 FOXI1Q12951 378 aa14.61□□□□□ -0.07
LIMS2-215ENST00000484252 ZNF56Q15929 161 aa14.61□□□□□ -0.07
LIMS2-215ENST00000484252 NSUN5P1Q3KNT7 163 aa14.61□□□□□ -0.07
LIMS2-215ENST00000484252 FAM74A4Q5TZK3 123 aa14.61□□□□□ -0.07
LIMS2-215ENST00000484252 C10orf99Q6UWK7 81 aa14.61□□□□□ -0.07
LIMS2-215ENST00000484252 C1QTNF4Q9BXJ3 329 aa14.61□□□□□ -0.07
LIMS2-215ENST00000484252 TRAV12-2A0A075B6T6 113 aa14.6□□□□□ -0.07
LIMS2-215ENST00000484252 ELANEP08246 267 aa14.6□□□□□ -0.07
LIMS2-215ENST00000484252 ZNF876PQ49A33 203 aa14.6□□□□□ -0.07
LIMS2-215ENST00000484252 IGKV3-20P01619 116 aa14.59□□□□□ -0.07
LIMS2-215ENST00000484252 SRSF9Q13242 221 aaKnown RBP eCLIP14.59□□□□□ -0.07
LIMS2-215ENST00000484252 PLEKHB2Q96CS7 222 aa14.59□□□□□ -0.07
LIMS2-215ENST00000484252 SYNJ2BPP57105 145 aa14.59□□□□□ -0.07
LIMS2-215ENST00000484252 TRGV11A0A075B6L2 103 aa14.58□□□□□ -0.08
LIMS2-215ENST00000484252 SPINK13Q1W4C9 94 aa14.58□□□□□ -0.08
LIMS2-215ENST00000484252 MORN3Q6PF18 240 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-215ENST00000484252 AMTNQ6UX39 209 aa14.58□□□□□ -0.08
LIMS2-215ENST00000484252 UBE2D1P51668 147 aa14.57□□□□□ -0.08
LIMS2-215ENST00000484252 VPREB3Q9UKI3 123 aa14.57□□□□□ -0.08
LIMS2-215ENST00000484252 ZNF256Q9Y2P7 627 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-215ENST00000484252 KLHL30-AS1Q8NEE0 82 aa14.57□□□□□ -0.08
LIMS2-215ENST00000484252 UBE2E2Q96LR5 201 aa14.57□□□□□ -0.08
LIMS2-215ENST00000484252 AGRNO00468 2067 aa14.57□□□□□ -0.08
LIMS2-215ENST00000484252 DOPEY1Q5JWR5 2465 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 A0A096LNT2 108 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 A0A0J9YY99 117 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 SPINK8P0C7L1 97 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 DLX4Q92988 240 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-215ENST00000484252 IGSF10Q6WRI0 2623 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 INSL3P51460 131 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 EMP1P54849 157 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 TMEM170BQ5T4T1 132 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 NFE4Q86UQ8 179 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 PGPEP1Q9NXJ5 209 aa14.56□□□□□ -0.08
LIMS2-215ENST00000484252 CFAP126Q5VTH2 177 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms