RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 C2orf82Q6UX34 121 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 C14orf178Q8N769 122 aaPredicted RBP8.79□□□□□ -1
SEC61A1-205ENST00000483956 OR13C6PQ8NH95 151 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 DYNAPQ8N1N2 210 aa8.78□□□□□ -1
SEC61A1-205ENST00000483956 Q8N6K4 173 aa8.78□□□□□ -1
SEC61A1-205ENST00000483956 Q8NA96 180 aa8.78□□□□□ -1
SEC61A1-205ENST00000483956 TMEM263Q8WUH6 116 aaKnown RBP8.78□□□□□ -1
SEC61A1-205ENST00000483956 TOMM6Q96B49 74 aa8.78□□□□□ -1
SEC61A1-205ENST00000483956 UQCRQO14949 82 aa8.78□□□□□ -1
SEC61A1-205ENST00000483956 C11orf86A6NJI1 115 aa8.78□□□□□ -1
SEC61A1-205ENST00000483956 ERCC8Q13216 396 aa8.78□□□□□ -1
SEC61A1-205ENST00000483956 LINC00526Q96FQ7 95 aa8.78□□□□□ -1
SEC61A1-205ENST00000483956 SMIM2Q9BVW6 85 aa8.78□□□□□ -1
SEC61A1-205ENST00000483956 LINC00527Q9UJ94 153 aa8.77□□□□□ -1.01
SEC61A1-205ENST00000483956 POLEQ07864 2286 aa8.77□□□□□ -1.01
SEC61A1-205ENST00000483956 COL6A6A6NMZ7 2263 aa8.76□□□□□ -1.01
SEC61A1-205ENST00000483956 TACC2O95359 2948 aa8.76□□□□□ -1.01
SEC61A1-205ENST00000483956 F5H768 121 aa8.76□□□□□ -1.01
SEC61A1-205ENST00000483956 IGHV3-23P01764 117 aa8.76□□□□□ -1.01
SEC61A1-205ENST00000483956 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
SEC61A1-205ENST00000483956 H7C423 109 aa8.76□□□□□ -1.01
SEC61A1-205ENST00000483956 KLK9Q2XQG4 91 aa8.76□□□□□ -1.01
SEC61A1-205ENST00000483956 SLC50A1Q9BRV3 221 aa8.76□□□□□ -1.01
SEC61A1-205ENST00000483956 KLK9Q9UKQ9 250 aa8.76□□□□□ -1.01
SEC61A1-205ENST00000483956 IGKV3D-20A0A0C4DH25 116 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 PRAC2D3DTV9 90 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 TMEM170BQ5T4T1 132 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 C2orf66Q6UXQ4 117 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 TMEM219Q86XT9 240 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 FAM240AA0A1B0GVK7 77 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 BUB3O43684 328 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 TRIAP1O43715 76 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 ORMDL2Q53FV1 153 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 ZFAND3Q9H8U3 227 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 IGHV4-4A0A075B6R2 117 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 CRYGDP07320 174 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.75□□□□□ -1.01
SEC61A1-205ENST00000483956 IGLV4-69A0A075B6H9 119 aa8.74□□□□□ -1.01
SEC61A1-205ENST00000483956 MRPL53Q96EL3 112 aaKnown RBP8.74□□□□□ -1.01
SEC61A1-205ENST00000483956 IGHV7-81A0A0B4J1V7 117 aa8.74□□□□□ -1.01
SEC61A1-205ENST00000483956 GAGE2AQ6NT46 116 aa8.74□□□□□ -1.01
SEC61A1-205ENST00000483956 AMELXQ99217 191 aa8.74□□□□□ -1.01
SEC61A1-205ENST00000483956 C11orf21Q9P2W6 132 aa8.74□□□□□ -1.01
SEC61A1-205ENST00000483956 IGHV7-4-1A0A0J9YVY3 117 aa8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 MINOS1Q5TGZ0 78 aa8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 VMO1Q7Z5L0 202 aa8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 MINOS1-NBL1R4GNA1 71 aa8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 A0A0B4J2C4 111 aa8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 RPS28P62857 69 aaKnown RBP8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 C4orf26Q17RF5 130 aa8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 MUSTN1Q8IVN3 82 aa8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 FAM110DQ8TAY7 271 aaPredicted RBP8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 METTL26Q96S19 204 aa8.73□□□□□ -1.01
SEC61A1-205ENST00000483956 RNF182Q8N6D2 247 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 AGPAT4-IT1Q9H0P7 198 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 SPTAN1Q13813 2472 aaKnown RBP8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 KIR2DL5BQ8NHK3 375 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 CYSTM1Q9H1C7 97 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 TRAV41A0A0B4J266 112 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 CLPSL1A2RUU4 121 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 SUMO2P61956 95 aaKnown RBP8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 C15orf32Q32M92 178 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 LINC01560Q8TB33 94 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 DEFB104AQ8WTQ1 72 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 IMUPQ9GZP8 106 aa8.72□□□□□ -1.01
SEC61A1-205ENST00000483956 IGHV3OR16-8A0A075B7F1 116 aa8.71□□□□□ -1.01
SEC61A1-205ENST00000483956 FBXL19-AS1Q494R0 122 aa8.71□□□□□ -1.01
SEC61A1-205ENST00000483956 SPANXN1Q5VSR9 72 aa8.71□□□□□ -1.01
SEC61A1-205ENST00000483956 HRCT1Q6UXD1 115 aa8.71□□□□□ -1.01
SEC61A1-205ENST00000483956 SMCR5Q8TEV8 140 aa8.71□□□□□ -1.01
SEC61A1-205ENST00000483956 EEF1AKMT3Q96AZ1 226 aa8.71□□□□□ -1.01
SEC61A1-205ENST00000483956 ARHGAP32A7KAX9 2087 aa8.71□□□□□ -1.02
SEC61A1-205ENST00000483956 hADV29S1A0JD25 119 aa8.71□□□□□ -1.02
SEC61A1-205ENST00000483956 SPRY2O43597 315 aa8.71□□□□□ -1.02
SEC61A1-205ENST00000483956 COX7CP15954 63 aa8.71□□□□□ -1.02
SEC61A1-205ENST00000483956 C9orf47Q6ZRZ4 202 aa8.71□□□□□ -1.02
SEC61A1-205ENST00000483956 Q8N9W7 124 aa8.71□□□□□ -1.02
SEC61A1-205ENST00000483956 ANKHD1Q8IWZ3 2542 aaKnown RBP8.71□□□□□ -1.02
SEC61A1-205ENST00000483956 TRBV30A0A0K0K1B3 111 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 H3BT86 120 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 J3QQQ9 107 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 OXTP01178 125 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 NBL1P41271 181 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 CLEC2BQ92478 149 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 ZNF256Q9Y2P7 627 aaPredicted RBP8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 MSRB2Q9Y3D2 182 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 TLN1Q9Y490 2541 aaKnown RBP8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 IGHV3-35A0A0C4DH35 117 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 TSHBP01222 138 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 DEFB121Q5J5C9 76 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 OVOL1O14753 267 aa8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 LGALS3P17931 250 aaKnown RBP8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 CITED2Q99967 270 aaPredicted RBP8.7□□□□□ -1.02
SEC61A1-205ENST00000483956 LY6HO94772 140 aa8.69□□□□□ -1.02
SEC61A1-205ENST00000483956 C2orf48Q96LS8 159 aa8.69□□□□□ -1.02
SEC61A1-205ENST00000483956 CCDC140Q96MF4 163 aa8.69□□□□□ -1.02
SEC61A1-205ENST00000483956 DCHS2Q6V1P9 2916 aa8.69□□□□□ -1.02
SEC61A1-205ENST00000483956 CRYGAP11844 174 aa8.68□□□□□ -1.02
SEC61A1-205ENST00000483956 UBE2E1P51965 193 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms