RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SRSF2Q01130 221 aaKnown RBP9.49□□□□□ -0.89
CCDC78-213ENST00000482878 TRPT1Q86TN4 253 aaKnown RBP9.49□□□□□ -0.89
CCDC78-213ENST00000482878 MAPK1IP1LQ8NDC0 245 aa9.49□□□□□ -0.89
CCDC78-213ENST00000482878 IGHV4-39P01824 125 aa9.49□□□□□ -0.89
CCDC78-213ENST00000482878 C15orf32Q32M92 178 aa9.49□□□□□ -0.89
CCDC78-213ENST00000482878 IGKV3D-20A0A0C4DH25 116 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 BUB3O43684 328 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 UBE2D3P61077 147 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 UBE2D2P62837 147 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 NDUFA11Q86Y39 141 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 C11orf21Q9P2W6 132 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 ASIPP42127 132 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 EBI3Q14213 229 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 Q8N9W7 124 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 BPESC1Q9GZL8 116 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 VPREB3Q9UKI3 123 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 HRNRQ86YZ3 2850 aaPredicted RBP9.48□□□□□ -0.89
CCDC78-213ENST00000482878 NACAE9PAV3 2078 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 TRGV3P03979 118 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 NRGNQ92686 78 aa9.48□□□□□ -0.89
CCDC78-213ENST00000482878 ZFP36P26651 326 aaKnown RBP9.47□□□□□ -0.89
CCDC78-213ENST00000482878 ATP5J2P56134 94 aa9.47□□□□□ -0.89
CCDC78-213ENST00000482878 CRIP2P52943 208 aaPredicted RBP9.47□□□□□ -0.89
CCDC78-213ENST00000482878 DEFB104AQ8WTQ1 72 aa9.47□□□□□ -0.89
CCDC78-213ENST00000482878 IGSF10Q6WRI0 2623 aa9.47□□□□□ -0.89
CCDC78-213ENST00000482878 CENPVL3A0A0U1RRI6 287 aa9.47□□□□□ -0.89
CCDC78-213ENST00000482878 UBE2D1P51668 147 aa9.47□□□□□ -0.89
CCDC78-213ENST00000482878 FBXL19-AS1Q494R0 122 aa9.47□□□□□ -0.89
CCDC78-213ENST00000482878 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
CCDC78-213ENST00000482878 JMJD1CQ15652 2540 aa9.47□□□□□ -0.89
CCDC78-213ENST00000482878 ZANQ9Y493 2812 aa9.47□□□□□ -0.89
CCDC78-213ENST00000482878 HIVEP2P31629 2446 aa9.46□□□□□ -0.89
CCDC78-213ENST00000482878 TRAV2A0A0B4J234 112 aa9.46□□□□□ -0.89
CCDC78-213ENST00000482878 CLPSL1A2RUU4 121 aa9.46□□□□□ -0.89
CCDC78-213ENST00000482878 SPANXN1Q5VSR9 72 aa9.46□□□□□ -0.89
CCDC78-213ENST00000482878 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.89
CCDC78-213ENST00000482878 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.89
CCDC78-213ENST00000482878 IGLV2-18A0A075B6J9 118 aa9.46□□□□□ -0.9
CCDC78-213ENST00000482878 Q8N1Y9 231 aa9.46□□□□□ -0.9
CCDC78-213ENST00000482878 DOPEY1Q5JWR5 2465 aa9.46□□□□□ -0.9
CCDC78-213ENST00000482878 PRB1P04280 392 aa9.46□□□□□ -0.9
CCDC78-213ENST00000482878 C11orf71Q6IPW1 123 aa9.46□□□□□ -0.9
CCDC78-213ENST00000482878 OOSP1A8MZH6 123 aa9.45□□□□□ -0.9
CCDC78-213ENST00000482878 ATP6V0E1O15342 81 aa9.45□□□□□ -0.9
CCDC78-213ENST00000482878 MINOS1Q5TGZ0 78 aa9.45□□□□□ -0.9
CCDC78-213ENST00000482878 CLEC19AQ6UXS0 136 aa9.45□□□□□ -0.9
CCDC78-213ENST00000482878 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
CCDC78-213ENST00000482878 FAM110DQ8TAY7 271 aaPredicted RBP9.45□□□□□ -0.9
CCDC78-213ENST00000482878 PRO1854Q9UHT4 67 aa9.45□□□□□ -0.9
CCDC78-213ENST00000482878 MINOS1-NBL1R4GNA1 71 aa9.45□□□□□ -0.9
CCDC78-213ENST00000482878 PRRC2AP48634 2157 aaKnown RBP9.44□□□□□ -0.9
CCDC78-213ENST00000482878 TEX49A0A1B0GTD5 131 aa9.44□□□□□ -0.9
CCDC78-213ENST00000482878 RBAKDNA6NC62 111 aa9.44□□□□□ -0.9
CCDC78-213ENST00000482878 ZNF56Q15929 161 aa9.44□□□□□ -0.9
CCDC78-213ENST00000482878 CCDC140Q96MF4 163 aa9.44□□□□□ -0.9
CCDC78-213ENST00000482878 ITPR1Q14643 2758 aa9.44□□□□□ -0.9
CCDC78-213ENST00000482878 LINC01619G3V211 115 aa9.44□□□□□ -0.9
CCDC78-213ENST00000482878 G3V318 75 aa9.44□□□□□ -0.9
CCDC78-213ENST00000482878 IGHV7-4-1A0A0J9YVY3 117 aa9.44□□□□□ -0.9
CCDC78-213ENST00000482878 HERVK_113P61574 105 aa9.44□□□□□ -0.9
CCDC78-213ENST00000482878 IGHV3-11P01762 117 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 CD7P09564 240 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 CFC1P0CG37 223 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 A0A1W2PPR1 153 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 C19orf84I3L1E1 186 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 NRACQ8N912 160 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 FN1P02751 2386 aaKnown RBP9.43□□□□□ -0.9
CCDC78-213ENST00000482878 MRPL23Q16540 153 aaKnown RBP9.43□□□□□ -0.9
CCDC78-213ENST00000482878 SIRPDQ9H106 197 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 ZFHX3Q15911 3703 aa9.43□□□□□ -0.9
CCDC78-213ENST00000482878 TMEM170BQ5T4T1 132 aa9.42□□□□□ -0.9
CCDC78-213ENST00000482878 Q6ZS46 218 aa9.41□□□□□ -0.9
CCDC78-213ENST00000482878 TRAV12-1A0A0B4J245 112 aa9.41□□□□□ -0.9
CCDC78-213ENST00000482878 H3BMM0 161 aa9.41□□□□□ -0.9
CCDC78-213ENST00000482878 SPRY2O43597 315 aa9.41□□□□□ -0.9
CCDC78-213ENST00000482878 MGPP08493 103 aa9.41□□□□□ -0.9
CCDC78-213ENST00000482878 SBSPONQ8IVN8 264 aa9.41□□□□□ -0.9
CCDC78-213ENST00000482878 UBE2WQ96B02 151 aa9.41□□□□□ -0.9
CCDC78-213ENST00000482878 SMIM2Q9BVW6 85 aa9.41□□□□□ -0.9
CCDC78-213ENST00000482878 ORMDL2Q53FV1 153 aa9.4□□□□□ -0.9
CCDC78-213ENST00000482878 C2orf66Q6UXQ4 117 aa9.4□□□□□ -0.9
CCDC78-213ENST00000482878 RASL10AQ92737 203 aa9.4□□□□□ -0.9
CCDC78-213ENST00000482878 SAA4P35542 130 aa9.4□□□□□ -0.9
CCDC78-213ENST00000482878 DUX5Q96PT3 197 aa9.4□□□□□ -0.9
CCDC78-213ENST00000482878 A0A0J9YY99 117 aa9.4□□□□□ -0.91
CCDC78-213ENST00000482878 KLK9Q2XQG4 91 aa9.4□□□□□ -0.91
CCDC78-213ENST00000482878 PRR9Q5T870 116 aa9.4□□□□□ -0.91
CCDC78-213ENST00000482878 C9orf153Q5TBE3 101 aa9.4□□□□□ -0.91
CCDC78-213ENST00000482878 BAALCQ8WXS3 180 aa9.4□□□□□ -0.91
CCDC78-213ENST00000482878 ODF3Q96PU9 254 aa9.4□□□□□ -0.91
CCDC78-213ENST00000482878 METTL26Q96S19 204 aa9.4□□□□□ -0.91
CCDC78-213ENST00000482878 TMEM126AQ9H061 195 aa9.4□□□□□ -0.91
CCDC78-213ENST00000482878 KLK9Q9UKQ9 250 aa9.4□□□□□ -0.91
CCDC78-213ENST00000482878 A4D1N5 150 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 M0R381 172 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 IGF1P05019 195 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms