RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 PIK3CD-AS1Q5SR53 167 aa13.8□□□□□ -0.2
VPS36-204ENST00000480923 SH2D6Q7Z4S9 175 aa13.8□□□□□ -0.2
VPS36-204ENST00000480923 LINC01551Q86U37 167 aa13.8□□□□□ -0.2
VPS36-204ENST00000480923 SYT8Q8NBV8 401 aa13.8□□□□□ -0.2
VPS36-204ENST00000480923 ADCYAP1P18509 176 aa13.79□□□□□ -0.2
VPS36-204ENST00000480923 TNP2Q05952 138 aa13.79□□□□□ -0.2
VPS36-204ENST00000480923 RPL23P62829 140 aaKnown RBP13.78□□□□□ -0.2
VPS36-204ENST00000480923 PNRC1Q12796 327 aaPredicted RBP13.78□□□□□ -0.2
VPS36-204ENST00000480923 ADIRFQ15847 76 aa13.78□□□□□ -0.2
VPS36-204ENST00000480923 C10orf91Q5T1B1 145 aa13.78□□□□□ -0.2
VPS36-204ENST00000480923 DMRTA1Q5VZB9 504 aa13.78□□□□□ -0.2
VPS36-204ENST00000480923 PRR27Q6MZM9 219 aa13.78□□□□□ -0.2
VPS36-204ENST00000480923 DAZAP1Q96EP5 407 aaKnown RBP13.78□□□□□ -0.2
VPS36-204ENST00000480923 JPT2Q9H910 190 aa13.78□□□□□ -0.2
VPS36-204ENST00000480923 PHLDA3Q9Y5J5 127 aa13.78□□□□□ -0.2
VPS36-204ENST00000480923 K7EN84 100 aa13.77□□□□□ -0.21
VPS36-204ENST00000480923 ZFP2Q6ZN57 461 aa13.77□□□□□ -0.21
VPS36-204ENST00000480923 CARHSP1Q9Y2V2 147 aaKnown RBP13.77□□□□□ -0.21
VPS36-204ENST00000480923 M0R381 172 aa13.76□□□□□ -0.21
VPS36-204ENST00000480923 RPL19P84098 196 aaKnown RBP13.76□□□□□ -0.21
VPS36-204ENST00000480923 ZNF575Q86XF7 245 aa13.76□□□□□ -0.21
VPS36-204ENST00000480923 WFDC10BQ8IUB3 73 aa13.76□□□□□ -0.21
VPS36-204ENST00000480923 SAMD10Q9BYL1 202 aa13.76□□□□□ -0.21
VPS36-204ENST00000480923 SCRT2Q9NQ03 307 aa13.76□□□□□ -0.21
VPS36-204ENST00000480923 BTF3P20290 206 aaKnown RBP13.75□□□□□ -0.21
VPS36-204ENST00000480923 Q6ZSN1 163 aa13.75□□□□□ -0.21
VPS36-204ENST00000480923 ZFP82Q8N141 532 aa13.75□□□□□ -0.21
VPS36-204ENST00000480923 RHODO00212 210 aa13.74□□□□□ -0.21
VPS36-204ENST00000480923 LINC00315P59091 139 aa13.74□□□□□ -0.21
VPS36-204ENST00000480923 ERVFC1-1P60608 527 aa13.74□□□□□ -0.21
VPS36-204ENST00000480923 FAM74A4Q5TZK3 123 aa13.74□□□□□ -0.21
VPS36-204ENST00000480923 ISOC2Q96AB3 205 aa13.74□□□□□ -0.21
VPS36-204ENST00000480923 TRAV9-2A0A087WT02 112 aa13.73□□□□□ -0.21
VPS36-204ENST00000480923 C19orf71A6NCJ1 209 aa13.73□□□□□ -0.21
VPS36-204ENST00000480923 TIRAPP58753 221 aa13.73□□□□□ -0.21
VPS36-204ENST00000480923 UFSP1Q6NVU6 142 aa13.73□□□□□ -0.21
VPS36-204ENST00000480923 FAM231DQ6ZW35 169 aa13.73□□□□□ -0.21
VPS36-204ENST00000480923 SFRP2Q96HF1 295 aa13.73□□□□□ -0.21
VPS36-204ENST00000480923 A0A087WWL8 130 aa13.72□□□□□ -0.21
VPS36-204ENST00000480923 P01737 135 aa13.72□□□□□ -0.21
VPS36-204ENST00000480923 APOC3P02656 99 aa13.72□□□□□ -0.21
VPS36-204ENST00000480923 CXCL1P09341 107 aa13.72□□□□□ -0.21
VPS36-204ENST00000480923 MED14OSP0DP75 135 aa13.72□□□□□ -0.21
VPS36-204ENST00000480923 EVI2AP22794 236 aa13.72□□□□□ -0.21
VPS36-204ENST00000480923 C15orf54Q8N8G6 183 aa13.72□□□□□ -0.21
VPS36-204ENST00000480923 ATP6V0E2Q8NHE4 81 aa13.72□□□□□ -0.21
VPS36-204ENST00000480923 RNASE7Q9H1E1 156 aaKnown RBP13.72□□□□□ -0.21
VPS36-204ENST00000480923 GAGE12JA6NER3 117 aa13.71□□□□□ -0.21
VPS36-204ENST00000480923 GAGE1Q13065 139 aa13.71□□□□□ -0.21
VPS36-204ENST00000480923 GAGE4Q13068 117 aa13.71□□□□□ -0.21
VPS36-204ENST00000480923 GAGE5Q13069 117 aa13.71□□□□□ -0.21
VPS36-204ENST00000480923 GAGE13Q4V321 117 aa13.71□□□□□ -0.21
VPS36-204ENST00000480923 SVBPQ8N300 66 aa13.71□□□□□ -0.21
VPS36-204ENST00000480923 NUDT10Q8NFP7 164 aa13.71□□□□□ -0.21
VPS36-204ENST00000480923 NUDT11Q96G61 164 aa13.71□□□□□ -0.21
VPS36-204ENST00000480923 OSTCQ9NRP0 149 aa13.71□□□□□ -0.21
VPS36-204ENST00000480923 DYNC1H1Q14204 4646 aaKnown RBP13.71□□□□□ -0.22
VPS36-204ENST00000480923 DNAH10OSP0CZ25 163 aa13.7□□□□□ -0.22
VPS36-204ENST00000480923 OR10J3Q5JRS4 329 aa13.7□□□□□ -0.22
VPS36-204ENST00000480923 C14orf178Q8N769 122 aaPredicted RBP13.7□□□□□ -0.22
VPS36-204ENST00000480923 DNAH11Q96DT5 4516 aa13.7□□□□□ -0.22
VPS36-204ENST00000480923 PKD1P98161 4303 aa13.7□□□□□ -0.22
VPS36-204ENST00000480923 TRAV8-6A0A0B4J262 113 aa13.69□□□□□ -0.22
VPS36-204ENST00000480923 GATCO43716 136 aaKnown RBP13.69□□□□□ -0.22
VPS36-204ENST00000480923 OR10G8Q8NGN5 311 aa13.69□□□□□ -0.22
VPS36-204ENST00000480923 OR10AG1Q8NH19 301 aa13.69□□□□□ -0.22
VPS36-204ENST00000480923 GTSF1LQ9H1H1 148 aa13.69□□□□□ -0.22
VPS36-204ENST00000480923 RPP21Q9H633 154 aaKnown RBP13.69□□□□□ -0.22
VPS36-204ENST00000480923 XKRY2A2RUG3 117 aa13.68□□□□□ -0.22
VPS36-204ENST00000480923 PPP1R2P9O14990 202 aa13.68□□□□□ -0.22
VPS36-204ENST00000480923 MT-ND4LP03901 98 aa13.68□□□□□ -0.22
VPS36-204ENST00000480923 CRYGDP07320 174 aa13.68□□□□□ -0.22
VPS36-204ENST00000480923 RPS20P60866 119 aaKnown RBP13.68□□□□□ -0.22
VPS36-204ENST00000480923 LELP1Q5T871 98 aa13.68□□□□□ -0.22
VPS36-204ENST00000480923 OR2D3Q8NGH3 330 aa13.68□□□□□ -0.22
VPS36-204ENST00000480923 TNFRSF18Q9Y5U5 241 aa13.68□□□□□ -0.22
VPS36-204ENST00000480923 IGHV3-38A0A0C4DH36 116 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 MUC21A0A0G2JKD1 596 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 MUC21A0A140T8X8 626 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 K7EP13 123 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 SNAI2O43623 268 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 SNAPINO95295 136 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 SPANXN1Q5VSR9 72 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 CLRN3Q8NCR9 226 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 ANAPC16Q96DE5 110 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 MSRB1Q9NZV6 116 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 Q9UF83 564 aa13.67□□□□□ -0.22
VPS36-204ENST00000480923 KIAA1109Q2LD37 5005 aa13.66□□□□□ -0.22
VPS36-204ENST00000480923 OR5AL1P0C617 328 aa13.66□□□□□ -0.22
VPS36-204ENST00000480923 SSTP61278 116 aa13.66□□□□□ -0.22
VPS36-204ENST00000480923 RHEBQ15382 184 aa13.66□□□□□ -0.22
VPS36-204ENST00000480923 CT83Q5H943 113 aa13.66□□□□□ -0.22
VPS36-204ENST00000480923 NFE4Q86UQ8 179 aa13.66□□□□□ -0.22
VPS36-204ENST00000480923 C10orf126Q8N4M7 172 aa13.66□□□□□ -0.22
VPS36-204ENST00000480923 SSBP4Q9BWG4 385 aaPredicted RBP13.66□□□□□ -0.22
VPS36-204ENST00000480923 HERC2O95714 4834 aa13.65□□□□□ -0.22
VPS36-204ENST00000480923 LINC00694P0DN24 101 aa13.65□□□□□ -0.22
VPS36-204ENST00000480923 Q6ZRN7 208 aaPredicted RBP13.65□□□□□ -0.22
VPS36-204ENST00000480923 PKHD1P08F94 4074 aa13.65□□□□□ -0.22
VPS36-204ENST00000480923 A8MWL6 223 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms