RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CLPSL2Q6UWE3 100 aa7.51□□□□□ -1.21
VEGFA-212ENST00000480614 NDUFA1O15239 70 aa7.51□□□□□ -1.21
VEGFA-212ENST00000480614 TRAV4A0A0B4J268 109 aa7.51□□□□□ -1.21
VEGFA-212ENST00000480614 LINC00205P59089 165 aa7.51□□□□□ -1.21
VEGFA-212ENST00000480614 LINC01620Q4KN68 170 aa7.51□□□□□ -1.21
VEGFA-212ENST00000480614 IGLL1P15814 213 aa7.51□□□□□ -1.21
VEGFA-212ENST00000480614 NPBQ8NG41 125 aa7.5□□□□□ -1.21
VEGFA-212ENST00000480614 COX7B2Q8TF08 81 aa7.5□□□□□ -1.21
VEGFA-212ENST00000480614 SND1-IT1Q9HBX3 110 aa7.5□□□□□ -1.21
VEGFA-212ENST00000480614 ZNF581Q9P0T4 197 aa7.5□□□□□ -1.21
VEGFA-212ENST00000480614 MAST4O15021 2626 aa7.5□□□□□ -1.21
VEGFA-212ENST00000480614 DYNAPQ8N1N2 210 aa7.5□□□□□ -1.21
VEGFA-212ENST00000480614 A0A0B4J2C4 111 aa7.5□□□□□ -1.21
VEGFA-212ENST00000480614 ATP5G1P05496 136 aa7.5□□□□□ -1.21
VEGFA-212ENST00000480614 ATP6V0E2Q8NHE4 81 aa7.5□□□□□ -1.21
VEGFA-212ENST00000480614 CLPSL1A2RUU4 121 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 ZNRD1Q9P1U0 126 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 DEFB105AQ8NG35 78 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 NREPQ16612 68 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 UBE2AP49459 152 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 C5orf47Q569G3 176 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 IL17DQ8TAD2 202 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 TRBV7-3A0A075B6L6 115 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 H3BMG7 143 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 Q6ZR03 302 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 JMJD7-PLA2G4BH0Y9G9 81 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 SEC61GP60059 68 aa7.49□□□□□ -1.21
VEGFA-212ENST00000480614 PRR30Q53SZ7 412 aaPredicted RBP7.49□□□□□ -1.21
VEGFA-212ENST00000480614 KLK5Q9Y337 293 aaPredicted RBP7.49□□□□□ -1.21
VEGFA-212ENST00000480614 WDR86Q86TI4 376 aa7.48□□□□□ -1.21
VEGFA-212ENST00000480614 Q9HAA7 133 aa7.48□□□□□ -1.21
VEGFA-212ENST00000480614 CCL25O15444 150 aa7.48□□□□□ -1.21
VEGFA-212ENST00000480614 HIST2H2BCQ6DN03 193 aa7.48□□□□□ -1.21
VEGFA-212ENST00000480614 ZFP2Q6ZN57 461 aa7.48□□□□□ -1.21
VEGFA-212ENST00000480614 PROP1O75360 226 aa7.48□□□□□ -1.21
VEGFA-212ENST00000480614 GP9P14770 177 aa7.48□□□□□ -1.21
VEGFA-212ENST00000480614 C5orf24Q7Z6I8 188 aa7.48□□□□□ -1.21
VEGFA-212ENST00000480614 ZNF747Q9BV97 191 aa7.48□□□□□ -1.21
VEGFA-212ENST00000480614 Q6ZQT7 251 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 HIGD1BQ9P298 99 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 A0A0J9YY99 117 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 FHL1Q13642 323 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 RNF144BQ7Z419 303 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 ZNF491Q8N8L2 437 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 KIR2DL5BQ8NHK3 375 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 WFDC9Q8NEX5 89 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 NTN5Q8WTR8 489 aaPredicted RBP7.47□□□□□ -1.21
VEGFA-212ENST00000480614 C1orf147Q96MC9 270 aaPredicted RBP7.47□□□□□ -1.21
VEGFA-212ENST00000480614 DKK2Q9UBU2 259 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 PRR20EP86478 221 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 PRR20CP86479 221 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 PRR20DP86480 221 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 PRR20BP86481 221 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 PRR20AP86496 221 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 ZNF726P1Q15940 193 aa7.47□□□□□ -1.21
VEGFA-212ENST00000480614 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.46□□□□□ -1.21
VEGFA-212ENST00000480614 IGKV2-29A2NJV5 120 aaPredicted RBP7.46□□□□□ -1.21
VEGFA-212ENST00000480614 TEN1Q86WV5 123 aa7.46□□□□□ -1.21
VEGFA-212ENST00000480614 B5MCH6 92 aa7.46□□□□□ -1.21
VEGFA-212ENST00000480614 MAPK1IP1LQ8NDC0 245 aa7.46□□□□□ -1.21
VEGFA-212ENST00000480614 MED14OSP0DP75 135 aa7.46□□□□□ -1.21
VEGFA-212ENST00000480614 TPSG1Q9NRR2 321 aa7.46□□□□□ -1.21
VEGFA-212ENST00000480614 RNASE13Q5GAN3 156 aaKnown RBP7.46□□□□□ -1.22
VEGFA-212ENST00000480614 AGPAT4-IT1Q9H0P7 198 aa7.46□□□□□ -1.22
VEGFA-212ENST00000480614 TMEM89A2RUT3 159 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 PSMB8P28062 276 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 C9orf47Q6ZRZ4 202 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 FAM215AQ9Y5M1 114 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 TMEM256-PLSCR3K7ERE1 68 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 B9D2Q9BPU9 175 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 K7EMT4 169 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 IGLV3-1P01715 115 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 IGF2-ASQ6U949 168 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 Q8NFD4 153 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 A0A096LPF7 62 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 PIFOQ8TCI5 191 aa7.45□□□□□ -1.22
VEGFA-212ENST00000480614 CENPVL3A0A0U1RRI6 287 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 DUX4L9Q6RFH8 374 aaPredicted RBP7.44□□□□□ -1.22
VEGFA-212ENST00000480614 SS18L2Q9UHA2 77 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 HECTD1Q9ULT8 2610 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 GNRH2O43555 120 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 PLA2G2CQ5R387 149 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 GPHB5Q86YW7 130 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 PRSS33Q8NF86 280 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 HIGD2BQ4VC39 106 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 C5orf38Q86SI9 138 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 PIP4P1Q86T03 277 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 BAALCQ8WXS3 180 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 DIRC1Q969H9 104 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 PROK2Q9HC23 129 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 HHLA3Q9XRX5 114 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 ATRQ13535 2644 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 LY6G6EA0A0G2JKS1 128 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 K7EN84 100 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 U3KQA8 63 aa7.44□□□□□ -1.22
VEGFA-212ENST00000480614 IGHV4-59P01825 116 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 FAM120AOSQ5T036 256 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 DEFB113Q30KQ7 82 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 Q71RC1 249 aaPredicted RBP7.43□□□□□ -1.22
VEGFA-212ENST00000480614 AMTNQ6UX39 209 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms