RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 IGLV4-69A0A075B6H9 119 aa10.02□□□□□ -0.81
PDZRN3-208ENST00000479530 IGHV3-11P01762 117 aa10.02□□□□□ -0.81
PDZRN3-208ENST00000479530 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.81
PDZRN3-208ENST00000479530 RNF183Q96D59 192 aa10.02□□□□□ -0.81
PDZRN3-208ENST00000479530 MRPL53Q96EL3 112 aaKnown RBP10.02□□□□□ -0.81
PDZRN3-208ENST00000479530 U3KQE9 123 aa10.02□□□□□ -0.81
PDZRN3-208ENST00000479530 IGSF10Q6WRI0 2623 aa10.02□□□□□ -0.81
PDZRN3-208ENST00000479530 TRAV41A0A0B4J266 112 aa10.02□□□□□ -0.81
PDZRN3-208ENST00000479530 TCL1BO95988 128 aa10.02□□□□□ -0.81
PDZRN3-208ENST00000479530 IGKV3-7A0A075B6H7 116 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 TRBV7-9A0A0J9YWB2 115 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 KLK9Q2XQG4 91 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 NDUFA11Q86Y39 141 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 KLK9Q9UKQ9 250 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 A0A0J9YY99 117 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 BLCAPP62952 87 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 KIR2DL4Q99706 377 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 JPT2Q9H910 190 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 CUBNO60494 3623 aa10.01□□□□□ -0.81
PDZRN3-208ENST00000479530 ZFYVE26Q68DK2 2539 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 Q6ZUT4 128 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 FAM110AQ9BQ89 295 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 PRORYQ9H606 182 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 CACNA1AO00555 2505 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
PDZRN3-208ENST00000479530 EDN2P20800 178 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 RNASE4P34096 147 aaKnown RBP10□□□□□ -0.81
PDZRN3-208ENST00000479530 ARL3P36405 182 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 C19orf54Q5BKX5 351 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 ATP6V0E2Q8NHE4 81 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 TP53TG1Q9Y2A0 90 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 MYO18BQ8IUG5 2567 aa10□□□□□ -0.81
PDZRN3-208ENST00000479530 TRBV7-1A0A0A6YYK4 115 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 IGHV1-69DA0A0B4J2H0 117 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 IGHV1-69P01742 117 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 CFC1BP0CG36 223 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 CFC1P0CG37 223 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 ASIPP42127 132 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 NRGNQ92686 78 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 ERG28Q9UKR5 140 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 FBN2P35556 2912 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 BRI3O95415 125 aa9.99□□□□□ -0.81
PDZRN3-208ENST00000479530 TRAV21A0A0B4J279 112 aa9.98□□□□□ -0.81
PDZRN3-208ENST00000479530 MOB4Q9Y3A3 225 aa9.98□□□□□ -0.81
PDZRN3-208ENST00000479530 IGHV4-30-2A0A087WSY4 118 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 IGIPA6NJ69 53 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 IGHV3-30P01768 117 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 IGHV3-30-5P0DP03 117 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 SRD5A1P18405 259 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 LINC00315P59091 139 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 C9orf139Q6ZV77 190 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 TEN1Q86WV5 123 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 ZNRF2Q8NHG8 242 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 H3BUX3 64 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 AVPP01185 164 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 GAGE5Q13069 117 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 GAGE6Q13070 117 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 OR10J6PQ8NGY7 276 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 DOPEY2Q9Y3R5 2298 aa9.97□□□□□ -0.81
PDZRN3-208ENST00000479530 A0A087WWL8 130 aa9.96□□□□□ -0.81
PDZRN3-208ENST00000479530 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.81
PDZRN3-208ENST00000479530 TMEM170BQ5T4T1 132 aa9.96□□□□□ -0.81
PDZRN3-208ENST00000479530 PPDPFLQ8WWR9 84 aa9.96□□□□□ -0.81
PDZRN3-208ENST00000479530 LINC00477Q96M19 166 aa9.96□□□□□ -0.81
PDZRN3-208ENST00000479530 KIF25-AS1Q9Y6Z4 181 aa9.96□□□□□ -0.81
PDZRN3-208ENST00000479530 SOCS3O14543 225 aa9.96□□□□□ -0.82
PDZRN3-208ENST00000479530 CRIP2P52943 208 aaPredicted RBP9.96□□□□□ -0.82
PDZRN3-208ENST00000479530 RPL11P62913 178 aaKnown RBP9.96□□□□□ -0.82
PDZRN3-208ENST00000479530 ANKRD29Q8N6D5 301 aa9.96□□□□□ -0.82
PDZRN3-208ENST00000479530 RAX2Q96IS3 184 aa9.96□□□□□ -0.82
PDZRN3-208ENST00000479530 AMELXQ99217 191 aa9.96□□□□□ -0.82
PDZRN3-208ENST00000479530 LENEPQ9Y5L5 61 aa9.96□□□□□ -0.82
PDZRN3-208ENST00000479530 DOPEY1Q5JWR5 2465 aa9.96□□□□□ -0.82
PDZRN3-208ENST00000479530 OPRPNQ99935 248 aaPredicted RBP9.95□□□□□ -0.82
PDZRN3-208ENST00000479530 MXRA5Q9NR99 2828 aa9.95□□□□□ -0.82
PDZRN3-208ENST00000479530 B5MCH6 92 aa9.95□□□□□ -0.82
PDZRN3-208ENST00000479530 ACACBO00763 2458 aa9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 PMVKQ15126 192 aa9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 C10orf126Q8N4M7 172 aa9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 SLC25A29Q8N8R3 303 aa9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 C10orf105Q8TEF2 133 aa9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 PF4V1P10720 104 aa9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 SUMO4Q6EEV6 95 aa9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 TRPT1Q86TN4 253 aaKnown RBP9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 FAM19A4Q96LR4 140 aa9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 CCL19Q99731 98 aa9.94□□□□□ -0.82
PDZRN3-208ENST00000479530 A8MWV9 139 aa9.93□□□□□ -0.82
PDZRN3-208ENST00000479530 SCGB1C2P0DMR2 95 aa9.93□□□□□ -0.82
PDZRN3-208ENST00000479530 POLR2KP53803 58 aaKnown RBP9.93□□□□□ -0.82
PDZRN3-208ENST00000479530 C10orf99Q6UWK7 81 aa9.93□□□□□ -0.82
PDZRN3-208ENST00000479530 ATP5J2P56134 94 aa9.93□□□□□ -0.82
PDZRN3-208ENST00000479530 SBSPONQ8IVN8 264 aa9.93□□□□□ -0.82
PDZRN3-208ENST00000479530 FAM208BQ5VWN6 2430 aa9.93□□□□□ -0.82
PDZRN3-208ENST00000479530 IGHV3-64A0A075B6Q5 118 aa9.92□□□□□ -0.82
PDZRN3-208ENST00000479530 H7C2G1 150 aa9.92□□□□□ -0.82
PDZRN3-208ENST00000479530 HERVK_113P61574 105 aa9.92□□□□□ -0.82
PDZRN3-208ENST00000479530 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
PDZRN3-208ENST00000479530 TNFRSF18Q9Y5U5 241 aa9.92□□□□□ -0.82
PDZRN3-208ENST00000479530 FAM223BA6NKX1 122 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms