RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 TMEM95Q3KNT9 176 aa18.33■□□□□ 0.52
SYNGAP1-206ENST00000479510 LINC01356Q8N9X3 169 aa18.33■□□□□ 0.52
SYNGAP1-206ENST00000479510 IGHV4-59P01825 116 aa18.32■□□□□ 0.52
SYNGAP1-206ENST00000479510 DEFB112Q30KQ8 113 aa18.32■□□□□ 0.52
SYNGAP1-206ENST00000479510 JPT2Q9H910 190 aa18.32■□□□□ 0.52
SYNGAP1-206ENST00000479510 ZNF688P0C7X2 276 aa18.32■□□□□ 0.52
SYNGAP1-206ENST00000479510 RHOHQ15669 191 aa18.32■□□□□ 0.52
SYNGAP1-206ENST00000479510 SELENOKQ9Y6D0 94 aa18.32■□□□□ 0.52
SYNGAP1-206ENST00000479510 A0A087WWL8 130 aa18.31■□□□□ 0.52
SYNGAP1-206ENST00000479510 C11orf86A6NJI1 115 aa18.3■□□□□ 0.52
SYNGAP1-206ENST00000479510 HOXA3O43365 443 aaPredicted RBP18.3■□□□□ 0.52
SYNGAP1-206ENST00000479510 SPTAN1Q13813 2472 aaKnown RBP18.3■□□□□ 0.52
SYNGAP1-206ENST00000479510 IGHV1OR15-1A0A075B7D0 117 aa18.3■□□□□ 0.52
SYNGAP1-206ENST00000479510 ELANEP08246 267 aa18.29■□□□□ 0.52
SYNGAP1-206ENST00000479510 NSUN5P1Q3KNT7 163 aa18.29■□□□□ 0.52
SYNGAP1-206ENST00000479510 SCGB1D4Q6XE38 83 aa18.29■□□□□ 0.52
SYNGAP1-206ENST00000479510 M0QY20 66 aa18.28■□□□□ 0.52
SYNGAP1-206ENST00000479510 ZNF876PQ49A33 203 aa18.28■□□□□ 0.52
SYNGAP1-206ENST00000479510 TRPT1Q86TN4 253 aaKnown RBP18.28■□□□□ 0.52
SYNGAP1-206ENST00000479510 Q8N1Y9 231 aa18.27■□□□□ 0.52
SYNGAP1-206ENST00000479510 AGRNO00468 2067 aa18.26■□□□□ 0.51
SYNGAP1-206ENST00000479510 RPL24P83731 157 aaKnown RBP18.26■□□□□ 0.51
SYNGAP1-206ENST00000479510 CD300EQ496F6 205 aaPredicted RBP18.26■□□□□ 0.51
SYNGAP1-206ENST00000479510 WFDC12Q8WWY7 111 aa18.26■□□□□ 0.51
SYNGAP1-206ENST00000479510 MDFICQ9P1T7 246 aa18.26■□□□□ 0.51
SYNGAP1-206ENST00000479510 ZNF256Q9Y2P7 627 aaPredicted RBP18.26■□□□□ 0.51
SYNGAP1-206ENST00000479510 UBE2D1P51668 147 aa18.26■□□□□ 0.51
SYNGAP1-206ENST00000479510 SPANXB1Q9NS25 103 aaPredicted RBP18.26■□□□□ 0.51
SYNGAP1-206ENST00000479510 TRGV11A0A075B6L2 103 aa18.25■□□□□ 0.51
SYNGAP1-206ENST00000479510 RPL39P62891 51 aaKnown RBP18.25■□□□□ 0.51
SYNGAP1-206ENST00000479510 MORN3Q6PF18 240 aaPredicted RBP18.25■□□□□ 0.51
SYNGAP1-206ENST00000479510 SRSF9Q13242 221 aaKnown RBP eCLIP18.24■□□□□ 0.51
SYNGAP1-206ENST00000479510 ZNF56Q15929 161 aa18.24■□□□□ 0.51
SYNGAP1-206ENST00000479510 TEX48A0A1B0GUV7 120 aa18.24■□□□□ 0.51
SYNGAP1-206ENST00000479510 FAM74A4Q5TZK3 123 aa18.24■□□□□ 0.51
SYNGAP1-206ENST00000479510 NFE4Q86UQ8 179 aa18.24■□□□□ 0.51
SYNGAP1-206ENST00000479510 PLEKHB2Q96CS7 222 aa18.24■□□□□ 0.51
SYNGAP1-206ENST00000479510 VPREB3Q9UKI3 123 aa18.24■□□□□ 0.51
SYNGAP1-206ENST00000479510 SVEP1Q4LDE5 3571 aa18.24■□□□□ 0.51
SYNGAP1-206ENST00000479510 ITPR1Q14643 2758 aa18.23■□□□□ 0.51
SYNGAP1-206ENST00000479510 A0A096LNT2 108 aa18.23■□□□□ 0.51
SYNGAP1-206ENST00000479510 C10orf99Q6UWK7 81 aa18.23■□□□□ 0.51
SYNGAP1-206ENST00000479510 UBE2E2Q96LR5 201 aa18.23■□□□□ 0.51
SYNGAP1-206ENST00000479510 EDA2RQ9HAV5 297 aa18.23■□□□□ 0.51
SYNGAP1-206ENST00000479510 TRAV12-2A0A075B6T6 113 aa18.22■□□□□ 0.51
SYNGAP1-206ENST00000479510 J3QR89 54 aa18.22■□□□□ 0.51
SYNGAP1-206ENST00000479510 SYNJ2BPP57105 145 aa18.22■□□□□ 0.51
SYNGAP1-206ENST00000479510 A0A0J9YY99 117 aa18.22■□□□□ 0.51
SYNGAP1-206ENST00000479510 GAGE13Q4V321 117 aa18.22■□□□□ 0.51
SYNGAP1-206ENST00000479510 H3BMG7 143 aa18.21■□□□□ 0.51
SYNGAP1-206ENST00000479510 SPINK13Q1W4C9 94 aa18.21■□□□□ 0.51
SYNGAP1-206ENST00000479510 AMTNQ6UX39 209 aa18.21■□□□□ 0.51
SYNGAP1-206ENST00000479510 KLHL30-AS1Q8NEE0 82 aa18.21■□□□□ 0.51
SYNGAP1-206ENST00000479510 IGKV3-20P01619 116 aa18.2■□□□□ 0.5
SYNGAP1-206ENST00000479510 WFDC2Q14508 124 aa18.2■□□□□ 0.5
SYNGAP1-206ENST00000479510 PGPEP1Q9NXJ5 209 aa18.2■□□□□ 0.5
SYNGAP1-206ENST00000479510 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.2■□□□□ 0.5
SYNGAP1-206ENST00000479510 I3L3M4 83 aa18.19■□□□□ 0.5
SYNGAP1-206ENST00000479510 MRPL16Q9NX20 251 aaKnown RBP18.19■□□□□ 0.5
SYNGAP1-206ENST00000479510 PRO0461Q9UI25 63 aa18.19■□□□□ 0.5
SYNGAP1-206ENST00000479510 FSHBP01225 129 aa18.19■□□□□ 0.5
SYNGAP1-206ENST00000479510 HOXD3P31249 432 aaPredicted RBP18.19■□□□□ 0.5
SYNGAP1-206ENST00000479510 TMEM170BQ5T4T1 132 aa18.19■□□□□ 0.5
SYNGAP1-206ENST00000479510 ZNRF2Q8NHG8 242 aa18.19■□□□□ 0.5
SYNGAP1-206ENST00000479510 PKD1L2Q7Z442 2459 aa18.19■□□□□ 0.5
SYNGAP1-206ENST00000479510 LYRM7Q5U5X0 104 aa18.18■□□□□ 0.5
SYNGAP1-206ENST00000479510 SLC25A29Q8N8R3 303 aa18.18■□□□□ 0.5
SYNGAP1-206ENST00000479510 C20orf203Q8NBC4 194 aa18.18■□□□□ 0.5
SYNGAP1-206ENST00000479510 Q6YL49 198 aa18.18■□□□□ 0.5
SYNGAP1-206ENST00000479510 ZNF702PQ9H963 129 aa18.18■□□□□ 0.5
SYNGAP1-206ENST00000479510 A8MTW9 85 aa18.17■□□□□ 0.5
SYNGAP1-206ENST00000479510 EMP1P54849 157 aa18.16■□□□□ 0.5
SYNGAP1-206ENST00000479510 TRAV2A0A0B4J234 112 aa18.16■□□□□ 0.5
SYNGAP1-206ENST00000479510 J3QQQ9 107 aa18.16■□□□□ 0.5
SYNGAP1-206ENST00000479510 TGFAP01135 160 aa18.16■□□□□ 0.5
SYNGAP1-206ENST00000479510 DOPEY1Q5JWR5 2465 aa18.15■□□□□ 0.5
SYNGAP1-206ENST00000479510 P0DMU3 169 aa18.15■□□□□ 0.5
SYNGAP1-206ENST00000479510 FAM231AP0DMU4 169 aa18.15■□□□□ 0.5
SYNGAP1-206ENST00000479510 FAM231CP0DMU5 169 aa18.15■□□□□ 0.5
SYNGAP1-206ENST00000479510 PIK3CD-AS1Q5SR53 167 aa18.15■□□□□ 0.5
SYNGAP1-206ENST00000479510 DLX4Q92988 240 aaPredicted RBP18.15■□□□□ 0.5
SYNGAP1-206ENST00000479510 AMELXQ99217 191 aa18.14■□□□□ 0.5
SYNGAP1-206ENST00000479510 LEPROTO15243 131 aa18.14■□□□□ 0.49
SYNGAP1-206ENST00000479510 IGHV3-30P01768 117 aa18.14■□□□□ 0.49
SYNGAP1-206ENST00000479510 IGHV3-30-5P0DP03 117 aa18.14■□□□□ 0.49
SYNGAP1-206ENST00000479510 LGALS3P17931 250 aaKnown RBP18.14■□□□□ 0.49
SYNGAP1-206ENST00000479510 TSPEAR-AS2P59090 65 aa18.14■□□□□ 0.49
SYNGAP1-206ENST00000479510 TMEM223A0PJW6 202 aa18.13■□□□□ 0.49
SYNGAP1-206ENST00000479510 TSPAN13O95857 204 aa18.13■□□□□ 0.49
SYNGAP1-206ENST00000479510 UBE2D3P61077 147 aa18.13■□□□□ 0.49
SYNGAP1-206ENST00000479510 UBE2D2P62837 147 aa18.13■□□□□ 0.49
SYNGAP1-206ENST00000479510 Q5PR19 223 aa18.13■□□□□ 0.49
SYNGAP1-206ENST00000479510 NDUFA11Q86Y39 141 aa18.13■□□□□ 0.49
SYNGAP1-206ENST00000479510 NRGNQ92686 78 aa18.13■□□□□ 0.49
SYNGAP1-206ENST00000479510 CRYBA4P53673 196 aa18.12■□□□□ 0.49
SYNGAP1-206ENST00000479510 TCTEX1D4Q5JR98 221 aa18.12■□□□□ 0.49
SYNGAP1-206ENST00000479510 PYGO1Q9Y3Y4 419 aa18.12■□□□□ 0.49
SYNGAP1-206ENST00000479510 PTH2Q96A98 100 aa18.11■□□□□ 0.49
SYNGAP1-206ENST00000479510 ETDBQ3ZM63 59 aa18.1■□□□□ 0.49
SYNGAP1-206ENST00000479510 ATP6V0E2Q8NHE4 81 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms