RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 ATG101Q9BSB4 218 aa5.4□□□□□ -1.54
HMGCL-205ENST00000479458 NDUFAF3Q9BU61 184 aa5.4□□□□□ -1.54
HMGCL-205ENST00000479458 AP5S1Q9NUS5 200 aa5.4□□□□□ -1.54
HMGCL-205ENST00000479458 TP53TG3Q9ULZ0 132 aa5.4□□□□□ -1.54
HMGCL-205ENST00000479458 PSG8Q9UQ74 426 aa5.4□□□□□ -1.54
HMGCL-205ENST00000479458 GAGE12BA1L429 117 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 FBLL1A6NHQ2 334 aaKnown RBP5.39□□□□□ -1.55
HMGCL-205ENST00000479458 K7EQM0 130 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 GAGE7O76087 117 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 PFN1P07737 140 aaKnown RBP5.39□□□□□ -1.55
HMGCL-205ENST00000479458 GAGE12FP0CL80 117 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 GAGE12GP0CL81 117 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 GAGE12IP0CL82 117 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 RPL23P62829 140 aaKnown RBP5.39□□□□□ -1.55
HMGCL-205ENST00000479458 ZNF415Q09FC8 603 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 TMEM241Q24JQ0 296 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 Q6ZR54 194 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 Q6ZTI0 123 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 POM121L12Q8N7R1 296 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 TMEM75Q8N9X5 138 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 TMEM18Q96B42 140 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 NDFIP1Q9BT67 221 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 KLF12Q9Y4X4 402 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 ARL2-SNX15V9GYD0 113 aa5.39□□□□□ -1.55
HMGCL-205ENST00000479458 TRGV11A0A075B6L2 103 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 TRGV1A0A0A0MS02 117 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 TRAV34A0A0B4J273 112 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 TRAV21A0A0B4J279 112 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 A0A1B0GV90 55 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 XKRY2A2RUG3 117 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 F5H768 121 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 PEX7O00628 323 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 SPINK4O60575 86 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 INAFM2P0DMQ5 153 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 ZNF80P51504 273 aaPredicted RBP5.38□□□□□ -1.55
HMGCL-205ENST00000479458 IQCJQ1A5X6 159 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 TDRG1Q3Y452 100 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 FAM159AQ6UWV7 190 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 PRNTQ86SH4 94 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 MRPL52Q86TS9 123 aaKnown RBP5.38□□□□□ -1.55
HMGCL-205ENST00000479458 C15orf53Q8NAA6 179 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 LINC00479Q96M42 142 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 C18orf15Q96N68 181 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 C8orf49Q96NF6 230 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 IMMP2LQ96T52 175 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 PARLQ9H300 379 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 PRO1933Q9H354 126 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 NAGKQ9UJ70 344 aa5.38□□□□□ -1.55
HMGCL-205ENST00000479458 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 NACAE9PAV3 2078 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 EPM2AB3EWF7 344 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 P0DMU3 169 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 FAM231AP0DMU4 169 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 FAM231CP0DMU5 169 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 GZMBP10144 247 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 TMEM183BQ1AE95 376 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 SAPCD1Q5SSQ6 148 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 CST9LP1Q5W188 147 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 Q86TA4 180 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 TXNDC17Q9BRA2 123 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 MRPL16Q9NX20 251 aaKnown RBP5.37□□□□□ -1.55
HMGCL-205ENST00000479458 MDFICQ9P1T7 246 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 C11orf21Q9P2W6 132 aa5.37□□□□□ -1.55
HMGCL-205ENST00000479458 TRGV2A0A075B6R0 118 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 TRAV9-1A0A075B6T8 112 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 IGHV3-16A0A0C4DH30 117 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 A0A1W2PPQ1 181 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 GNRH2O43555 120 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 PDE6DO43924 150 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 PAGE4O60829 102 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 OR5I1Q13606 314 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 KCNS1Q96KK3 526 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 SPXQ9BT56 116 aa5.36□□□□□ -1.55
HMGCL-205ENST00000479458 TRAV26-1A0A087WT03 109 aa5.35□□□□□ -1.55
HMGCL-205ENST00000479458 TRBV6-1A0A0K0K1D8 114 aa5.35□□□□□ -1.55
HMGCL-205ENST00000479458 COX8CQ7Z4L0 72 aa5.35□□□□□ -1.55
HMGCL-205ENST00000479458 FMC1Q96HJ9 113 aa5.35□□□□□ -1.55
HMGCL-205ENST00000479458 ZFP30Q9Y2G7 519 aa5.35□□□□□ -1.55
HMGCL-205ENST00000479458 VPS13BQ7Z7G8 4022 aa5.35□□□□□ -1.55
HMGCL-205ENST00000479458 FAT1Q14517 4588 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 A0A0J9YY99 117 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 H3BNG1 76 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 M0R2P5 195 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 NUDT3O95989 172 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 IGHV3-53P01767 116 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 RAB4AP20338 218 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 UBE2G1P62253 170 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 UBE2DNLQ8IWF7 75 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 ZNF664Q8N3J9 261 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 RASL10AQ92737 203 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 ZC2HC1AQ96GY0 325 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 VSIG2Q96IQ7 327 aa5.34□□□□□ -1.55
HMGCL-205ENST00000479458 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.34□□□□□ -1.55
HMGCL-205ENST00000479458 IGKV3D-20A0A0C4DH25 116 aa5.33□□□□□ -1.56
HMGCL-205ENST00000479458 FABP5P3A8MUU1 101 aa5.33□□□□□ -1.56
HMGCL-205ENST00000479458 M0R143 59 aa5.33□□□□□ -1.56
HMGCL-205ENST00000479458 TCAPO15273 167 aa5.33□□□□□ -1.56
HMGCL-205ENST00000479458 LTAP01374 205 aa5.33□□□□□ -1.56
HMGCL-205ENST00000479458 RNASE3P12724 160 aaKnown RBP5.33□□□□□ -1.56
HMGCL-205ENST00000479458 CRIP1P50238 77 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms