RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 JPT2Q9H910 190 aa13.26□□□□□ -0.29
HPS4-211ENST00000479064 TRAV8-3A0A0A6YYJ7 113 aa13.25□□□□□ -0.29
HPS4-211ENST00000479064 A0A0D9SG52 128 aa13.25□□□□□ -0.29
HPS4-211ENST00000479064 ZFP82Q8N141 532 aa13.25□□□□□ -0.29
HPS4-211ENST00000479064 C14orf178Q8N769 122 aaPredicted RBP13.25□□□□□ -0.29
HPS4-211ENST00000479064 Q8N814 137 aa13.25□□□□□ -0.29
HPS4-211ENST00000479064 Q9HAA7 133 aa13.25□□□□□ -0.29
HPS4-211ENST00000479064 IGLV5-52A0A0A0MRZ9 124 aa13.24□□□□□ -0.29
HPS4-211ENST00000479064 TRBV10-1A0A0K0K1A3 114 aa13.24□□□□□ -0.29
HPS4-211ENST00000479064 PAGE4O60829 102 aa13.24□□□□□ -0.29
HPS4-211ENST00000479064 CXCL1P09341 107 aa13.24□□□□□ -0.29
HPS4-211ENST00000479064 EIF5AP63241 154 aaKnown RBP13.24□□□□□ -0.29
HPS4-211ENST00000479064 SFT2D1Q8WV19 159 aa13.24□□□□□ -0.29
HPS4-211ENST00000479064 TMEM70Q9BUB7 260 aa13.24□□□□□ -0.29
HPS4-211ENST00000479064 GRIFINA4D1Z8 144 aa13.23□□□□□ -0.29
HPS4-211ENST00000479064 SMLR1H3BR10 107 aa13.23□□□□□ -0.29
HPS4-211ENST00000479064 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
HPS4-211ENST00000479064 KANTRA0A1W2PQU2 76 aa13.22□□□□□ -0.29
HPS4-211ENST00000479064 BCL2L11O43521 198 aa13.22□□□□□ -0.29
HPS4-211ENST00000479064 FAM74A4Q5TZK3 123 aa13.22□□□□□ -0.29
HPS4-211ENST00000479064 FAM213BQ8TBF2 198 aa13.22□□□□□ -0.29
HPS4-211ENST00000479064 Q9UF83 564 aa13.22□□□□□ -0.29
HPS4-211ENST00000479064 M0R381 172 aa13.21□□□□□ -0.29
HPS4-211ENST00000479064 PFDN1O60925 122 aa13.21□□□□□ -0.29
HPS4-211ENST00000479064 C1QBP02746 253 aa13.21□□□□□ -0.29
HPS4-211ENST00000479064 FRZBQ92765 325 aa13.21□□□□□ -0.29
HPS4-211ENST00000479064 CHCHD7Q9BUK0 85 aa13.21□□□□□ -0.29
HPS4-211ENST00000479064 MLST8Q9BVC4 326 aa13.21□□□□□ -0.29
HPS4-211ENST00000479064 ZNF471Q9BX82 626 aaPredicted RBP13.21□□□□□ -0.29
HPS4-211ENST00000479064 FAT1Q14517 4588 aa13.19□□□□□ -0.3
HPS4-211ENST00000479064 A0A087WWL8 130 aa13.19□□□□□ -0.3
HPS4-211ENST00000479064 TMSB15BA0A087X1C1 80 aa13.19□□□□□ -0.3
HPS4-211ENST00000479064 H2AFB1P0C5Y9 115 aa13.19□□□□□ -0.3
HPS4-211ENST00000479064 NIT1Q86X76 327 aa13.19□□□□□ -0.3
HPS4-211ENST00000479064 URGCP-MRPS24S4R325 110 aa13.19□□□□□ -0.3
HPS4-211ENST00000479064 RPL36AP83881 106 aaKnown RBP13.18□□□□□ -0.3
HPS4-211ENST00000479064 Q5VSD8 79 aa13.18□□□□□ -0.3
HPS4-211ENST00000479064 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
HPS4-211ENST00000479064 BAGE2Q86Y30 109 aa13.18□□□□□ -0.3
HPS4-211ENST00000479064 Q8N3U1 123 aa13.18□□□□□ -0.3
HPS4-211ENST00000479064 OR10G8Q8NGN5 311 aa13.18□□□□□ -0.3
HPS4-211ENST00000479064 RPL36ALQ969Q0 106 aaKnown RBP13.18□□□□□ -0.3
HPS4-211ENST00000479064 RMI2Q96E14 147 aa13.18□□□□□ -0.3
HPS4-211ENST00000479064 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
HPS4-211ENST00000479064 TRBV7-3A0A075B6L6 115 aa13.17□□□□□ -0.3
HPS4-211ENST00000479064 SCO2A0A1W2PP80 73 aa13.17□□□□□ -0.3
HPS4-211ENST00000479064 RAB4BP61018 213 aa13.17□□□□□ -0.3
HPS4-211ENST00000479064 SSBP4Q9BWG4 385 aaPredicted RBP13.17□□□□□ -0.3
HPS4-211ENST00000479064 SNAI2O43623 268 aa13.16□□□□□ -0.3
HPS4-211ENST00000479064 OR5AL1P0C617 328 aa13.16□□□□□ -0.3
HPS4-211ENST00000479064 UBE2D3P61077 147 aa13.16□□□□□ -0.3
HPS4-211ENST00000479064 UBE2D2P62837 147 aa13.16□□□□□ -0.3
HPS4-211ENST00000479064 ELOBQ15370 118 aa13.16□□□□□ -0.3
HPS4-211ENST00000479064 TMUB2Q71RG4 321 aa13.15□□□□□ -0.3
HPS4-211ENST00000479064 MANBALQ9NQG1 85 aa13.15□□□□□ -0.3
HPS4-211ENST00000479064 TRAV1-1A0A0B4J248 108 aa13.14□□□□□ -0.31
HPS4-211ENST00000479064 INAFM2P0DMQ5 153 aa13.14□□□□□ -0.31
HPS4-211ENST00000479064 RAB5CP51148 216 aa13.14□□□□□ -0.31
HPS4-211ENST00000479064 PRR27Q6MZM9 219 aa13.14□□□□□ -0.31
HPS4-211ENST00000479064 KCNIP4Q6PIL6 250 aa13.14□□□□□ -0.31
HPS4-211ENST00000479064 A0A087WX48 190 aa13.13□□□□□ -0.31
HPS4-211ENST00000479064 A0A1B0GV50 99 aa13.13□□□□□ -0.31
HPS4-211ENST00000479064 OR10AG1Q8NH19 301 aa13.13□□□□□ -0.31
HPS4-211ENST00000479064 C11orf52Q96A22 123 aa13.13□□□□□ -0.31
HPS4-211ENST00000479064 FAM229AH3BQW9 127 aa13.12□□□□□ -0.31
HPS4-211ENST00000479064 RPL19P84098 196 aaKnown RBP13.12□□□□□ -0.31
HPS4-211ENST00000479064 WFDC2Q14508 124 aa13.12□□□□□ -0.31
HPS4-211ENST00000479064 EIF5AL1Q6IS14 154 aaKnown RBP13.12□□□□□ -0.31
HPS4-211ENST00000479064 ATRAIDQ6UW56 229 aa13.12□□□□□ -0.31
HPS4-211ENST00000479064 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.12□□□□□ -0.31
HPS4-211ENST00000479064 TEX46H3BTG2 121 aa13.11□□□□□ -0.31
HPS4-211ENST00000479064 RPL35P42766 123 aaKnown RBP13.11□□□□□ -0.31
HPS4-211ENST00000479064 Q0VG73 95 aa13.11□□□□□ -0.31
HPS4-211ENST00000479064 ZNF56Q15929 161 aa13.11□□□□□ -0.31
HPS4-211ENST00000479064 SPANXN1Q5VSR9 72 aa13.11□□□□□ -0.31
HPS4-211ENST00000479064 DNAH8Q96JB1 4490 aa13.11□□□□□ -0.31
HPS4-211ENST00000479064 DMBT1Q9UGM3 2413 aaPredicted RBP13.11□□□□□ -0.31
HPS4-211ENST00000479064 VPS13BQ7Z7G8 4022 aa13.1□□□□□ -0.31
HPS4-211ENST00000479064 TRBV6-8A0A0A6YYG3 113 aa13.1□□□□□ -0.31
HPS4-211ENST00000479064 PKIAP61925 76 aa13.1□□□□□ -0.31
HPS4-211ENST00000479064 Q6ZSA8 131 aa13.1□□□□□ -0.31
HPS4-211ENST00000479064 Q8N976 141 aa13.1□□□□□ -0.31
HPS4-211ENST00000479064 NEXN-AS1Q8NBZ9 246 aa13.1□□□□□ -0.31
HPS4-211ENST00000479064 SMIM12Q96EX1 92 aa13.1□□□□□ -0.31
HPS4-211ENST00000479064 KLK12Q9UKR0 248 aa13.1□□□□□ -0.31
HPS4-211ENST00000479064 SMR3BP02814 79 aaPredicted RBP13.09□□□□□ -0.31
HPS4-211ENST00000479064 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
HPS4-211ENST00000479064 IGKV2D-24A0A075B6R9 120 aa13.08□□□□□ -0.32
HPS4-211ENST00000479064 UBE2WQ96B02 151 aa13.08□□□□□ -0.32
HPS4-211ENST00000479064 AP1S3Q96PC3 154 aa13.08□□□□□ -0.32
HPS4-211ENST00000479064 FAM30AQ9NZY2 134 aa13.08□□□□□ -0.32
HPS4-211ENST00000479064 GNG13Q9P2W3 67 aa13.08□□□□□ -0.32
HPS4-211ENST00000479064 VAX2Q9UIW0 290 aa13.08□□□□□ -0.32
HPS4-211ENST00000479064 RBFOX3A6NFN3 312 aa13.07□□□□□ -0.32
HPS4-211ENST00000479064 RPS20P60866 119 aaKnown RBP13.07□□□□□ -0.32
HPS4-211ENST00000479064 CCL20P78556 96 aa13.07□□□□□ -0.32
HPS4-211ENST00000479064 BAALCQ8WXS3 180 aa13.07□□□□□ -0.32
HPS4-211ENST00000479064 SRRM2Q9UQ35 2752 aaKnown RBP13.06□□□□□ -0.32
HPS4-211ENST00000479064 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
HPS4-211ENST00000479064 SMIM17P0DL12 118 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms