RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 C19orf54Q5BKX5 351 aa13.7□□□□□ -0.22
PDE8A-204ENST00000478717 CITED1Q99966 193 aa13.7□□□□□ -0.22
PDE8A-204ENST00000478717 H3BUX3 64 aa13.7□□□□□ -0.22
PDE8A-204ENST00000478717 CD7P09564 240 aa13.7□□□□□ -0.22
PDE8A-204ENST00000478717 NDUFA11Q86Y39 141 aa13.7□□□□□ -0.22
PDE8A-204ENST00000478717 C10orf105Q8TEF2 133 aa13.7□□□□□ -0.22
PDE8A-204ENST00000478717 IGSF10Q6WRI0 2623 aa13.7□□□□□ -0.22
PDE8A-204ENST00000478717 TRPT1Q86TN4 253 aaKnown RBP13.7□□□□□ -0.22
PDE8A-204ENST00000478717 A6NJY4 79 aa13.69□□□□□ -0.22
PDE8A-204ENST00000478717 NDUFV3P56181 108 aaKnown RBP13.69□□□□□ -0.22
PDE8A-204ENST00000478717 RAX2Q96IS3 184 aa13.69□□□□□ -0.22
PDE8A-204ENST00000478717 C20orf173Q96LM9 149 aa13.69□□□□□ -0.22
PDE8A-204ENST00000478717 IGKV3-7A0A075B6H7 116 aa13.69□□□□□ -0.22
PDE8A-204ENST00000478717 H7C2G1 150 aa13.69□□□□□ -0.22
PDE8A-204ENST00000478717 RASL10AQ92737 203 aa13.69□□□□□ -0.22
PDE8A-204ENST00000478717 RPL32P62910 135 aaKnown RBP13.68□□□□□ -0.22
PDE8A-204ENST00000478717 SRSF2Q01130 221 aaKnown RBP13.68□□□□□ -0.22
PDE8A-204ENST00000478717 GAGE2BQ13066 116 aa13.68□□□□□ -0.22
PDE8A-204ENST00000478717 GAGE2EQ4V326 116 aa13.68□□□□□ -0.22
PDE8A-204ENST00000478717 C3orf56Q8N813 242 aa13.68□□□□□ -0.22
PDE8A-204ENST00000478717 NRGNQ92686 78 aa13.68□□□□□ -0.22
PDE8A-204ENST00000478717 GAGE2DQ9UEU5 116 aa13.68□□□□□ -0.22
PDE8A-204ENST00000478717 FAM223BA6NKX1 122 aa13.68□□□□□ -0.22
PDE8A-204ENST00000478717 FAM223AQ8IWN6 122 aa13.68□□□□□ -0.22
PDE8A-204ENST00000478717 C9JAW5 83 aa13.67□□□□□ -0.22
PDE8A-204ENST00000478717 CFC1BP0CG36 223 aa13.67□□□□□ -0.22
PDE8A-204ENST00000478717 CFC1P0CG37 223 aa13.67□□□□□ -0.22
PDE8A-204ENST00000478717 RPL11P62913 178 aaKnown RBP13.67□□□□□ -0.22
PDE8A-204ENST00000478717 PRR9Q5T870 116 aa13.67□□□□□ -0.22
PDE8A-204ENST00000478717 NEXN-AS1Q8NBZ9 246 aa13.67□□□□□ -0.22
PDE8A-204ENST00000478717 GAGE12JA6NER3 117 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 RHODO00212 210 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 GAGE7O76087 117 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 AVPP01185 164 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 GAGE12FP0CL80 117 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 GAGE12GP0CL81 117 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 GAGE12IP0CL82 117 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 GAGE4Q13068 117 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 SPANXN1Q5VSR9 72 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 LINC01619G3V211 115 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 C9orf47Q6ZRZ4 202 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 GPHB5Q86YW7 130 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 MYO18BQ8IUG5 2567 aa13.66□□□□□ -0.22
PDE8A-204ENST00000478717 DOPEY1Q5JWR5 2465 aa13.65□□□□□ -0.22
PDE8A-204ENST00000478717 PF4V1P10720 104 aa13.65□□□□□ -0.22
PDE8A-204ENST00000478717 BAALCQ8WXS3 180 aa13.65□□□□□ -0.22
PDE8A-204ENST00000478717 RPL39LQ96EH5 51 aaKnown RBP13.65□□□□□ -0.22
PDE8A-204ENST00000478717 CACNA1AO00555 2505 aa13.65□□□□□ -0.22
PDE8A-204ENST00000478717 IGHV7-4-1A0A0J9YVY3 117 aa13.65□□□□□ -0.22
PDE8A-204ENST00000478717 SNCGO76070 127 aa13.65□□□□□ -0.22
PDE8A-204ENST00000478717 CENPEQ02224 2701 aa13.65□□□□□ -0.23
PDE8A-204ENST00000478717 SLC25A20O43772 301 aa13.64□□□□□ -0.23
PDE8A-204ENST00000478717 BRI3O95415 125 aa13.64□□□□□ -0.23
PDE8A-204ENST00000478717 SRD5A1P18405 259 aa13.64□□□□□ -0.23
PDE8A-204ENST00000478717 TTC32Q5I0X7 151 aa13.64□□□□□ -0.23
PDE8A-204ENST00000478717 FAM159AQ6UWV7 190 aa13.64□□□□□ -0.23
PDE8A-204ENST00000478717 USP9YO00507 2555 aaPredicted RBP13.64□□□□□ -0.23
PDE8A-204ENST00000478717 TRAV12-1A0A0B4J245 112 aa13.64□□□□□ -0.23
PDE8A-204ENST00000478717 COX6B1P14854 86 aa13.64□□□□□ -0.23
PDE8A-204ENST00000478717 SMIM2Q9BVW6 85 aa13.64□□□□□ -0.23
PDE8A-204ENST00000478717 ACACBO00763 2458 aa13.64□□□□□ -0.23
PDE8A-204ENST00000478717 IGHG2P01859 326 aa13.63□□□□□ -0.23
PDE8A-204ENST00000478717 HIF1ANQ9NWT6 349 aa13.63□□□□□ -0.23
PDE8A-204ENST00000478717 ZANQ9Y493 2812 aa13.63□□□□□ -0.23
PDE8A-204ENST00000478717 MSMBP08118 114 aa13.63□□□□□ -0.23
PDE8A-204ENST00000478717 TMEM262E9PQX1 116 aa13.63□□□□□ -0.23
PDE8A-204ENST00000478717 F6UB75 175 aa13.63□□□□□ -0.23
PDE8A-204ENST00000478717 SBSPONQ8IVN8 264 aa13.63□□□□□ -0.23
PDE8A-204ENST00000478717 MRPL53Q96EL3 112 aaKnown RBP13.63□□□□□ -0.23
PDE8A-204ENST00000478717 POLQO75417 2590 aa13.62□□□□□ -0.23
PDE8A-204ENST00000478717 A0A0J9YY99 117 aa13.62□□□□□ -0.23
PDE8A-204ENST00000478717 A6NDX4 124 aa13.62□□□□□ -0.23
PDE8A-204ENST00000478717 C2orf66Q6UXQ4 117 aa13.62□□□□□ -0.23
PDE8A-204ENST00000478717 NTN5Q8WTR8 489 aaPredicted RBP13.62□□□□□ -0.23
PDE8A-204ENST00000478717 FAM110AQ9BQ89 295 aa13.62□□□□□ -0.23
PDE8A-204ENST00000478717 NDUFA4O00483 81 aa13.61□□□□□ -0.23
PDE8A-204ENST00000478717 ELANEP08246 267 aa13.61□□□□□ -0.23
PDE8A-204ENST00000478717 IFITM1P13164 125 aa13.61□□□□□ -0.23
PDE8A-204ENST00000478717 EDN2P20800 178 aa13.61□□□□□ -0.23
PDE8A-204ENST00000478717 TMEM95Q3KNT9 176 aa13.61□□□□□ -0.23
PDE8A-204ENST00000478717 TOMM6Q96B49 74 aa13.61□□□□□ -0.23
PDE8A-204ENST00000478717 M0R381 172 aa13.61□□□□□ -0.23
PDE8A-204ENST00000478717 TSPEAR-AS2P59090 65 aa13.61□□□□□ -0.23
PDE8A-204ENST00000478717 ZFYVE26Q68DK2 2539 aa13.6□□□□□ -0.23
PDE8A-204ENST00000478717 C11orf86A6NJI1 115 aa13.6□□□□□ -0.23
PDE8A-204ENST00000478717 C9orf139Q6ZV77 190 aa13.6□□□□□ -0.23
PDE8A-204ENST00000478717 C10orf126Q8N4M7 172 aa13.6□□□□□ -0.23
PDE8A-204ENST00000478717 TEX49A0A1B0GTD5 131 aa13.6□□□□□ -0.23
PDE8A-204ENST00000478717 VCX2Q9H322 139 aa13.6□□□□□ -0.23
PDE8A-204ENST00000478717 LYRM7Q5U5X0 104 aa13.59□□□□□ -0.23
PDE8A-204ENST00000478717 DOPEY2Q9Y3R5 2298 aa13.59□□□□□ -0.23
PDE8A-204ENST00000478717 DUSP14O95147 198 aaKnown RBP13.59□□□□□ -0.23
PDE8A-204ENST00000478717 Q8N1Y9 231 aa13.59□□□□□ -0.23
PDE8A-204ENST00000478717 BEX4Q9NWD9 120 aaPredicted RBP13.59□□□□□ -0.23
PDE8A-204ENST00000478717 SOCS3O14543 225 aa13.58□□□□□ -0.24
PDE8A-204ENST00000478717 EIF4EBP3O60516 100 aaPredicted RBP13.58□□□□□ -0.24
PDE8A-204ENST00000478717 IGHV3-30P01768 117 aa13.58□□□□□ -0.24
PDE8A-204ENST00000478717 IGHV3-30-5P0DP03 117 aa13.58□□□□□ -0.24
PDE8A-204ENST00000478717 SUMO2P61956 95 aaKnown RBP13.58□□□□□ -0.24
PDE8A-204ENST00000478717 ZFAND2AQ8N6M9 145 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms