RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 EVI2AP22794 236 aa9.42□□□□□ -0.9
SOX2-OT-208ENST00000477928 CENPWQ5EE01 88 aa9.42□□□□□ -0.9
SOX2-OT-208ENST00000477928 GTSF1LQ9H1H1 148 aa9.42□□□□□ -0.9
SOX2-OT-208ENST00000477928 MED9Q9NWA0 146 aa9.42□□□□□ -0.9
SOX2-OT-208ENST00000477928 TRAV8-6A0A0B4J262 113 aa9.41□□□□□ -0.9
SOX2-OT-208ENST00000477928 TRBV10-1A0A0K0K1A3 114 aa9.41□□□□□ -0.9
SOX2-OT-208ENST00000477928 TMEM250H0YL14 139 aa9.41□□□□□ -0.9
SOX2-OT-208ENST00000477928 LELP1Q5T871 98 aa9.41□□□□□ -0.9
SOX2-OT-208ENST00000477928 ALKAL2Q6UX46 152 aa9.41□□□□□ -0.9
SOX2-OT-208ENST00000477928 ATP6V0E2Q8NHE4 81 aa9.41□□□□□ -0.9
SOX2-OT-208ENST00000477928 DERL1Q9BUN8 251 aa9.41□□□□□ -0.9
SOX2-OT-208ENST00000477928 TMSB15BA0A087X1C1 80 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 IGHV3-73A0A0B4J1V6 119 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 C19orf71A6NCJ1 209 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 M0R381 172 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 IGLV2-8P01709 118 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 LINC00694P0DN24 101 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 FUSP35637 526 aaKnown RBP eCLIP9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 LINC00315P59091 139 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 PRR27Q6MZM9 219 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 WFDC10BQ8IUB3 73 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 RYR1P21817 5038 aa9.4□□□□□ -0.9
SOX2-OT-208ENST00000477928 A0A087WWC5 75 aa9.39□□□□□ -0.91
SOX2-OT-208ENST00000477928 CRYGDP07320 174 aa9.39□□□□□ -0.91
SOX2-OT-208ENST00000477928 KRTAP10-2P60368 255 aa9.39□□□□□ -0.91
SOX2-OT-208ENST00000477928 LINC01556Q5JQF7 62 aa9.39□□□□□ -0.91
SOX2-OT-208ENST00000477928 IGHV3-38A0A0C4DH36 116 aa9.38□□□□□ -0.91
SOX2-OT-208ENST00000477928 RBFOX3A6NFN3 312 aa9.38□□□□□ -0.91
SOX2-OT-208ENST00000477928 F2Z2F3 143 aa9.38□□□□□ -0.91
SOX2-OT-208ENST00000477928 P01737 135 aa9.38□□□□□ -0.91
SOX2-OT-208ENST00000477928 RAB4BP61018 213 aa9.38□□□□□ -0.91
SOX2-OT-208ENST00000477928 CACNG7P62955 275 aa9.38□□□□□ -0.91
SOX2-OT-208ENST00000477928 SPANXN1Q5VSR9 72 aa9.38□□□□□ -0.91
SOX2-OT-208ENST00000477928 Q6ZRN7 208 aaPredicted RBP9.38□□□□□ -0.91
SOX2-OT-208ENST00000477928 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
SOX2-OT-208ENST00000477928 A0A1B0GVG6 124 aa9.37□□□□□ -0.91
SOX2-OT-208ENST00000477928 RAB19A4D1S5 217 aa9.37□□□□□ -0.91
SOX2-OT-208ENST00000477928 RPL19P84098 196 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-208ENST00000477928 FAM74A4Q5TZK3 123 aa9.37□□□□□ -0.91
SOX2-OT-208ENST00000477928 WDR73Q6P4I2 378 aa9.37□□□□□ -0.91
SOX2-OT-208ENST00000477928 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
SOX2-OT-208ENST00000477928 KRTAP4-5Q9BYR2 181 aa9.37□□□□□ -0.91
SOX2-OT-208ENST00000477928 JPT2Q9H910 190 aa9.37□□□□□ -0.91
SOX2-OT-208ENST00000477928 TRBV20OR9-2A0A075B6H5 130 aa9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 C16orf90A8MZG2 172 aa9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 IGLC6P0CF74 106 aa9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 RPL36AP83881 106 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 OR10J3Q5JRS4 329 aa9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 Q6ZSN1 163 aa9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 SPATA12Q7Z6I5 190 aa9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 RPL36ALQ969Q0 106 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 AP1S3Q96PC3 154 aa9.36□□□□□ -0.91
SOX2-OT-208ENST00000477928 TRBV7-3A0A075B6L6 115 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 A0A087WWL8 130 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 GAGE12JA6NER3 117 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 SMIM17P0DL12 118 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 GAGE1Q13065 139 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 GAGE4Q13068 117 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 GAGE5Q13069 117 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 LAGE3Q14657 143 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 GAGE13Q4V321 117 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 FER1L6-AS1Q8NA97 138 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 MSRB1Q9NZV6 116 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 Q9UF83 564 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 ABCA13Q86UQ4 5058 aa9.35□□□□□ -0.91
SOX2-OT-208ENST00000477928 LRP1BQ9NZR2 4599 aa9.34□□□□□ -0.91
SOX2-OT-208ENST00000477928 DNAH5Q8TE73 4624 aa9.34□□□□□ -0.91
SOX2-OT-208ENST00000477928 NKX2-5P52952 324 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-208ENST00000477928 FAM210AQ96ND0 272 aa9.34□□□□□ -0.91
SOX2-OT-208ENST00000477928 CHCHD7Q9BUK0 85 aa9.34□□□□□ -0.91
SOX2-OT-208ENST00000477928 IBA57-AS1B1ANH7 110 aa9.33□□□□□ -0.92
SOX2-OT-208ENST00000477928 EREGO14944 169 aa9.33□□□□□ -0.92
SOX2-OT-208ENST00000477928 TMEM97Q5BJF2 176 aa9.33□□□□□ -0.92
SOX2-OT-208ENST00000477928 TOR2AQ5JU69 321 aa9.33□□□□□ -0.92
SOX2-OT-208ENST00000477928 LCE2AQ5TA79 106 aaPredicted RBP9.33□□□□□ -0.92
SOX2-OT-208ENST00000477928 FAM231DQ6ZW35 169 aa9.33□□□□□ -0.92
SOX2-OT-208ENST00000477928 NUDT10Q8NFP7 164 aa9.33□□□□□ -0.92
SOX2-OT-208ENST00000477928 NUDT11Q96G61 164 aa9.33□□□□□ -0.92
SOX2-OT-208ENST00000477928 H7C1H1 209 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 TRGC1P0CF51 173 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 UBE2D3P61077 147 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 UBE2D2P62837 147 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 ZNF56Q15929 161 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 Q8N3U1 123 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 OCC1Q8TAD7 63 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 EIF5A2Q9GZV4 153 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 SMDT1Q9H4I9 107 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 KIF25-AS1Q9Y6Z4 181 aa9.32□□□□□ -0.92
SOX2-OT-208ENST00000477928 CTRLP40313 264 aa9.31□□□□□ -0.92
SOX2-OT-208ENST00000477928 ERVFC1-1P60608 527 aa9.31□□□□□ -0.92
SOX2-OT-208ENST00000477928 PKIAP61925 76 aa9.31□□□□□ -0.92
SOX2-OT-208ENST00000477928 CT83Q5H943 113 aa9.31□□□□□ -0.92
SOX2-OT-208ENST00000477928 DNAJC30Q96LL9 226 aa9.31□□□□□ -0.92
SOX2-OT-208ENST00000477928 HSPG2P98160 4391 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms