RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 GATA1P15976 413 aaPredicted RBP13.96□□□□□ -0.17
ACTB-210ENST00000477812 VSIG2Q96IQ7 327 aa13.96□□□□□ -0.17
ACTB-210ENST00000477812 AP1S3Q96PC3 154 aa13.96□□□□□ -0.17
ACTB-210ENST00000477812 KLK5Q9Y337 293 aaPredicted RBP13.96□□□□□ -0.17
ACTB-210ENST00000477812 TENM2Q9NT68 2774 aa13.96□□□□□ -0.17
ACTB-210ENST00000477812 TRAV26-1A0A087WT03 109 aa13.95□□□□□ -0.18
ACTB-210ENST00000477812 A0A087WWL8 130 aa13.95□□□□□ -0.18
ACTB-210ENST00000477812 RHODO00212 210 aa13.95□□□□□ -0.18
ACTB-210ENST00000477812 CRYBA4P53673 196 aa13.95□□□□□ -0.18
ACTB-210ENST00000477812 LINC00315P59091 139 aa13.95□□□□□ -0.18
ACTB-210ENST00000477812 Q6ZSN1 163 aa13.95□□□□□ -0.18
ACTB-210ENST00000477812 CLRN3Q8NCR9 226 aa13.95□□□□□ -0.18
ACTB-210ENST00000477812 IGHV3-73A0A0B4J1V6 119 aa13.94□□□□□ -0.18
ACTB-210ENST00000477812 TRGV4A0A0C4DH28 118 aa13.94□□□□□ -0.18
ACTB-210ENST00000477812 A0A1B0GUT8 65 aa13.94□□□□□ -0.18
ACTB-210ENST00000477812 C7orf77A4D0Y5 90 aa13.94□□□□□ -0.18
ACTB-210ENST00000477812 IGLL5B9A064 214 aa13.94□□□□□ -0.18
ACTB-210ENST00000477812 APOC3P02656 99 aa13.94□□□□□ -0.18
ACTB-210ENST00000477812 PRO0255Q9UI72 69 aa13.94□□□□□ -0.18
ACTB-210ENST00000477812 H3BNG1 76 aa13.93□□□□□ -0.18
ACTB-210ENST00000477812 RHEBQ15382 184 aa13.93□□□□□ -0.18
ACTB-210ENST00000477812 TWIST1Q15672 202 aa13.93□□□□□ -0.18
ACTB-210ENST00000477812 FAM74A4Q5TZK3 123 aa13.93□□□□□ -0.18
ACTB-210ENST00000477812 C14orf178Q8N769 122 aaPredicted RBP13.93□□□□□ -0.18
ACTB-210ENST00000477812 CTDSP1Q9GZU7 261 aa13.93□□□□□ -0.18
ACTB-210ENST00000477812 HHLA3Q9XRX5 114 aa13.93□□□□□ -0.18
ACTB-210ENST00000477812 A0A087WWC5 75 aa13.92□□□□□ -0.18
ACTB-210ENST00000477812 EVI2AP22794 236 aa13.92□□□□□ -0.18
ACTB-210ENST00000477812 SLAQ13239 276 aa13.92□□□□□ -0.18
ACTB-210ENST00000477812 SVBPQ8N300 66 aa13.92□□□□□ -0.18
ACTB-210ENST00000477812 APLNQ9ULZ1 77 aa13.92□□□□□ -0.18
ACTB-210ENST00000477812 A0A0J9YY99 117 aa13.91□□□□□ -0.18
ACTB-210ENST00000477812 TRBV6-4A0A1B0GX49 114 aa13.91□□□□□ -0.18
ACTB-210ENST00000477812 TRGC1P0CF51 173 aa13.91□□□□□ -0.18
ACTB-210ENST00000477812 SLC25A29Q8N8R3 303 aa13.91□□□□□ -0.18
ACTB-210ENST00000477812 BORCS7Q96B45 105 aa13.91□□□□□ -0.18
ACTB-210ENST00000477812 TMEM242Q9NWH2 141 aa13.91□□□□□ -0.18
ACTB-210ENST00000477812 PAX4O43316 350 aa13.9□□□□□ -0.18
ACTB-210ENST00000477812 ATP6V1G1O75348 118 aa13.9□□□□□ -0.18
ACTB-210ENST00000477812 TCTAP57738 103 aa13.9□□□□□ -0.18
ACTB-210ENST00000477812 IMMP2LQ96T52 175 aa13.9□□□□□ -0.18
ACTB-210ENST00000477812 A0A1B0GXF2 115 aa13.89□□□□□ -0.19
ACTB-210ENST00000477812 FAM3BP58499 235 aaPredicted RBP13.89□□□□□ -0.19
ACTB-210ENST00000477812 C15orf53Q8NAA6 179 aa13.89□□□□□ -0.19
ACTB-210ENST00000477812 SNAPINO95295 136 aa13.88□□□□□ -0.19
ACTB-210ENST00000477812 S100A1P23297 94 aa13.88□□□□□ -0.19
ACTB-210ENST00000477812 RAB4BP61018 213 aa13.88□□□□□ -0.19
ACTB-210ENST00000477812 RIGQ13278 110 aa13.88□□□□□ -0.19
ACTB-210ENST00000477812 DPH3P1Q9H4G8 78 aa13.88□□□□□ -0.19
ACTB-210ENST00000477812 Q9UF83 564 aa13.88□□□□□ -0.19
ACTB-210ENST00000477812 LOC100131303A0A0U1RQF7 123 aa13.87□□□□□ -0.19
ACTB-210ENST00000477812 SMIM17P0DL12 118 aa13.87□□□□□ -0.19
ACTB-210ENST00000477812 RHOHQ15669 191 aa13.87□□□□□ -0.19
ACTB-210ENST00000477812 A0A096LPF7 62 aa13.86□□□□□ -0.19
ACTB-210ENST00000477812 K7EQD1 137 aa13.86□□□□□ -0.19
ACTB-210ENST00000477812 ZNF56Q15929 161 aa13.86□□□□□ -0.19
ACTB-210ENST00000477812 MRPL54Q6P161 138 aaKnown RBP13.86□□□□□ -0.19
ACTB-210ENST00000477812 TMEM191AQ9H0A3 160 aa13.86□□□□□ -0.19
ACTB-210ENST00000477812 RPS10P5Q9NQ39 176 aa13.86□□□□□ -0.19
ACTB-210ENST00000477812 A0A1B0GW15 77 aa13.85□□□□□ -0.19
ACTB-210ENST00000477812 LINC00694P0DN24 101 aa13.85□□□□□ -0.19
ACTB-210ENST00000477812 GYPEP15421 78 aa13.85□□□□□ -0.19
ACTB-210ENST00000477812 ATRAIDQ6UW56 229 aa13.85□□□□□ -0.19
ACTB-210ENST00000477812 ATP5L2Q7Z4Y8 100 aa13.85□□□□□ -0.19
ACTB-210ENST00000477812 GATD1Q8NB37 220 aa13.85□□□□□ -0.19
ACTB-210ENST00000477812 NUDT3O95989 172 aa13.84□□□□□ -0.19
ACTB-210ENST00000477812 MGPP08493 103 aa13.84□□□□□ -0.19
ACTB-210ENST00000477812 P0DMU3 169 aa13.84□□□□□ -0.19
ACTB-210ENST00000477812 FAM231AP0DMU4 169 aa13.84□□□□□ -0.19
ACTB-210ENST00000477812 FAM231CP0DMU5 169 aa13.84□□□□□ -0.19
ACTB-210ENST00000477812 SUMO4Q6EEV6 95 aa13.84□□□□□ -0.19
ACTB-210ENST00000477812 PRADC1Q9BSG0 188 aa13.84□□□□□ -0.19
ACTB-210ENST00000477812 ICOSQ9Y6W8 199 aa13.84□□□□□ -0.19
ACTB-210ENST00000477812 M0QY20 66 aa13.83□□□□□ -0.2
ACTB-210ENST00000477812 HBBP68871 147 aa13.83□□□□□ -0.2
ACTB-210ENST00000477812 SMIM15Q7Z3B0 74 aa13.83□□□□□ -0.2
ACTB-210ENST00000477812 RNF185Q96GF1 192 aa13.83□□□□□ -0.2
ACTB-210ENST00000477812 BTF3L4Q96K17 158 aa13.83□□□□□ -0.2
ACTB-210ENST00000477812 DNAH1Q9P2D7 4330 aa13.83□□□□□ -0.2
ACTB-210ENST00000477812 ALMS1Q8TCU4 4167 aa13.82□□□□□ -0.2
ACTB-210ENST00000477812 TRAV9-1A0A075B6T8 112 aa13.82□□□□□ -0.2
ACTB-210ENST00000477812 TRBV10-1A0A0K0K1A3 114 aa13.82□□□□□ -0.2
ACTB-210ENST00000477812 F5H697 171 aa13.82□□□□□ -0.2
ACTB-210ENST00000477812 CAMPP49913 170 aa13.82□□□□□ -0.2
ACTB-210ENST00000477812 MRPL23Q16540 153 aaKnown RBP13.82□□□□□ -0.2
ACTB-210ENST00000477812 KCNIP4Q6PIL6 250 aa13.82□□□□□ -0.2
ACTB-210ENST00000477812 VPS13DQ5THJ4 4388 aa13.81□□□□□ -0.2
ACTB-210ENST00000477812 AMN1Q8IY45 258 aa13.81□□□□□ -0.2
ACTB-210ENST00000477812 S100A8P05109 93 aa13.8□□□□□ -0.2
ACTB-210ENST00000477812 NEXN-AS1Q8NBZ9 246 aa13.8□□□□□ -0.2
ACTB-210ENST00000477812 URGCP-MRPS24S4R325 110 aa13.8□□□□□ -0.2
ACTB-210ENST00000477812 LYSTQ99698 3801 aa13.8□□□□□ -0.2
ACTB-210ENST00000477812 TRAV26-2A0A0B4J265 109 aa13.79□□□□□ -0.2
ACTB-210ENST00000477812 RAB4AP20338 218 aa13.79□□□□□ -0.2
ACTB-210ENST00000477812 SRIP30626 198 aa13.79□□□□□ -0.2
ACTB-210ENST00000477812 FAM104BQ5XKR9 115 aa13.79□□□□□ -0.2
ACTB-210ENST00000477812 GAGE12JA6NER3 117 aa13.78□□□□□ -0.2
ACTB-210ENST00000477812 S100PP25815 95 aa13.78□□□□□ -0.2
ACTB-210ENST00000477812 GAGE1Q13065 139 aa13.78□□□□□ -0.2
ACTB-210ENST00000477812 GAGE4Q13068 117 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms