RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 G3V318 75 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 CCL21O00585 134 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 NPFFO15130 113 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 MGPP08493 103 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 CRYBA4P53673 196 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 CKS1BP61024 79 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 NDUFA11Q86Y39 141 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 ZNF418Q8TF45 676 aaPredicted RBP10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 KIR2DL4Q99706 377 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 KLK15Q9H2R5 256 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 KIF25-AS1Q9Y6Z4 181 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 CELSR2Q9HCU4 2923 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 IGLV4-69A0A075B6H9 119 aa10.21□□□□□ -0.77
HLA-DMA-208ENST00000477541 IGHV3OR16-13A0A075B7E8 117 aa10.21□□□□□ -0.77
HLA-DMA-208ENST00000477541 IGHV3-74A0A0B4J1X5 117 aa10.21□□□□□ -0.77
HLA-DMA-208ENST00000477541 TMEM262E9PQX1 116 aa10.21□□□□□ -0.77
HLA-DMA-208ENST00000477541 GRNP28799 593 aaKnown RBP10.21□□□□□ -0.77
HLA-DMA-208ENST00000477541 SLC25A29Q8N8R3 303 aa10.21□□□□□ -0.77
HLA-DMA-208ENST00000477541 POLQO75417 2590 aa10.21□□□□□ -0.77
HLA-DMA-208ENST00000477541 CRYGDP07320 174 aa10.21□□□□□ -0.78
HLA-DMA-208ENST00000477541 RNASE3P12724 160 aaKnown RBP10.21□□□□□ -0.78
HLA-DMA-208ENST00000477541 SMCPP49901 116 aaPredicted RBP10.21□□□□□ -0.78
HLA-DMA-208ENST00000477541 C10orf126Q8N4M7 172 aa10.21□□□□□ -0.78
HLA-DMA-208ENST00000477541 IGHV1-69P01742 117 aa10.2□□□□□ -0.78
HLA-DMA-208ENST00000477541 RHOHQ15669 191 aa10.2□□□□□ -0.78
HLA-DMA-208ENST00000477541 ZFP2Q6ZN57 461 aa10.2□□□□□ -0.78
HLA-DMA-208ENST00000477541 SYT8Q8NBV8 401 aa10.2□□□□□ -0.78
HLA-DMA-208ENST00000477541 PLEKHB2Q96CS7 222 aa10.2□□□□□ -0.78
HLA-DMA-208ENST00000477541 CDIP1Q9H305 208 aa10.2□□□□□ -0.78
HLA-DMA-208ENST00000477541 OTOGQ6ZRI0 2925 aa10.2□□□□□ -0.78
HLA-DMA-208ENST00000477541 IGHV3-49A0A0A0MS15 119 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 LOC107984156A0A0G2JMH3 177 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 TRBV27A0A0K0K1C4 114 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 A8MWV9 139 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 KLLNB2CW77 178 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 DUSP14O95147 198 aaKnown RBP10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 IGHV3-30P01768 117 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 IGF1P05019 195 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 IGHV3-30-5P0DP03 117 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 PSMB2P49721 201 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 LINC00315P59091 139 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 ARL17AQ8IVW1 177 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 ODF3Q96PU9 254 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 TP53TG1Q9Y2A0 90 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 LGALS9O00182 355 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 ZNF876PQ49A33 203 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 Q6ZQT7 251 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
HLA-DMA-208ENST00000477541 CSMD1Q96PZ7 3565 aa10.18□□□□□ -0.78
HLA-DMA-208ENST00000477541 TSHBP01222 138 aa10.18□□□□□ -0.78
HLA-DMA-208ENST00000477541 RNASE4P34096 147 aaKnown RBP10.18□□□□□ -0.78
HLA-DMA-208ENST00000477541 INSL3P51460 131 aa10.18□□□□□ -0.78
HLA-DMA-208ENST00000477541 ADORA2A-AS1P86434 159 aa10.18□□□□□ -0.78
HLA-DMA-208ENST00000477541 SETD2Q9BYW2 2564 aaPredicted RBP10.18□□□□□ -0.78
HLA-DMA-208ENST00000477541 PRO1854Q9UHT4 67 aa10.18□□□□□ -0.78
HLA-DMA-208ENST00000477541 CRYBG3Q68DQ2 2970 aa10.17□□□□□ -0.78
HLA-DMA-208ENST00000477541 WNK2Q9Y3S1 2297 aa10.17□□□□□ -0.78
HLA-DMA-208ENST00000477541 A0A0J9YX75 114 aa10.17□□□□□ -0.78
HLA-DMA-208ENST00000477541 ID1P41134 155 aa10.17□□□□□ -0.78
HLA-DMA-208ENST00000477541 NSUN5P1Q3KNT7 163 aa10.17□□□□□ -0.78
HLA-DMA-208ENST00000477541 A0A0B4J2C4 111 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 LINC01548A6NM66 108 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 LEPROTO15243 131 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 ZNF688P0C7X2 276 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 P0DMU3 169 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 FAM159AQ6UWV7 190 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 Q6ZUT4 128 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 ZFHX3Q15911 3703 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 J3QQQ9 107 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 K7EMT4 169 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 CFC1BP0CG36 223 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 CFC1P0CG37 223 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 LGALS3P17931 250 aaKnown RBP10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 LMO4P61968 165 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 SUMO4Q6EEV6 95 aa10.16□□□□□ -0.78
HLA-DMA-208ENST00000477541 NF1P21359 2839 aa10.15□□□□□ -0.78
HLA-DMA-208ENST00000477541 TCL1BO95988 128 aa10.15□□□□□ -0.78
HLA-DMA-208ENST00000477541 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.78
HLA-DMA-208ENST00000477541 SDHAF1A6NFY7 115 aa10.14□□□□□ -0.79
HLA-DMA-208ENST00000477541 GNRH2O43555 120 aa10.14□□□□□ -0.79
HLA-DMA-208ENST00000477541 KLRB1Q12918 225 aa10.14□□□□□ -0.79
HLA-DMA-208ENST00000477541 UNQ9165/PRO28630Q6UXU0 137 aa10.14□□□□□ -0.79
HLA-DMA-208ENST00000477541 KLHL30-AS1Q8NEE0 82 aa10.14□□□□□ -0.79
HLA-DMA-208ENST00000477541 AMELXQ99217 191 aa10.14□□□□□ -0.79
HLA-DMA-208ENST00000477541 MDFICQ9P1T7 246 aa10.14□□□□□ -0.79
HLA-DMA-208ENST00000477541 ZNF580Q9UK33 172 aa10.14□□□□□ -0.79
HLA-DMA-208ENST00000477541 J3KRW8 73 aa10.13□□□□□ -0.79
HLA-DMA-208ENST00000477541 IGHG2P01859 326 aa10.13□□□□□ -0.79
HLA-DMA-208ENST00000477541 TMEM170BQ5T4T1 132 aa10.13□□□□□ -0.79
HLA-DMA-208ENST00000477541 F8P00451 2351 aa10.13□□□□□ -0.79
HLA-DMA-208ENST00000477541 TRPT1Q86TN4 253 aaKnown RBP10.13□□□□□ -0.79
HLA-DMA-208ENST00000477541 CARD19Q96LW7 228 aa10.13□□□□□ -0.79
HLA-DMA-208ENST00000477541 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
HLA-DMA-208ENST00000477541 DAZ1Q9NQZ3 744 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms