RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 TOMM6Q96B49 74 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 HLA-DRB4X5D2U9 266 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 RBMY1BA6NDE4 496 aaKnown RBP8.48□□□□□ -1.05
NUP188-205ENST00000477069 RBMY1EA6NEQ0 496 aaKnown RBP8.48□□□□□ -1.05
NUP188-205ENST00000477069 RBMY1DP0C7P1 496 aaKnown RBP8.48□□□□□ -1.05
NUP188-205ENST00000477069 SUMO4Q6EEV6 95 aa8.48□□□□□ -1.05
NUP188-205ENST00000477069 FOXC2Q99958 501 aa8.48□□□□□ -1.05
NUP188-205ENST00000477069 CHD6Q8TD26 2715 aa8.48□□□□□ -1.05
NUP188-205ENST00000477069 KNCNA6PVL3 124 aa8.48□□□□□ -1.05
NUP188-205ENST00000477069 NUDT3O95989 172 aa8.48□□□□□ -1.05
NUP188-205ENST00000477069 FHL3Q13643 280 aa8.48□□□□□ -1.05
NUP188-205ENST00000477069 BVES-AS1Q5T3Y7 98 aa8.48□□□□□ -1.05
NUP188-205ENST00000477069 H3BMM0 161 aa8.47□□□□□ -1.05
NUP188-205ENST00000477069 PRSS1P07477 247 aa8.47□□□□□ -1.05
NUP188-205ENST00000477069 DEFB131AP59861 70 aa8.47□□□□□ -1.05
NUP188-205ENST00000477069 RNASE8Q8TDE3 154 aaKnown RBP8.47□□□□□ -1.05
NUP188-205ENST00000477069 DEFB114Q30KQ6 69 aa8.47□□□□□ -1.05
NUP188-205ENST00000477069 IGKCP01834 107 aa8.47□□□□□ -1.05
NUP188-205ENST00000477069 POLR2KP53803 58 aaKnown RBP8.47□□□□□ -1.05
NUP188-205ENST00000477069 KHDC1LQ5JSQ8 128 aa8.47□□□□□ -1.05
NUP188-205ENST00000477069 RAX2Q96IS3 184 aa8.47□□□□□ -1.05
NUP188-205ENST00000477069 A0A087WWL8 130 aa8.46□□□□□ -1.06
NUP188-205ENST00000477069 A0A087WX48 190 aa8.46□□□□□ -1.06
NUP188-205ENST00000477069 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
NUP188-205ENST00000477069 CSTL1Q9H114 145 aa8.46□□□□□ -1.06
NUP188-205ENST00000477069 MAP6D1Q9H9H5 199 aa8.46□□□□□ -1.06
NUP188-205ENST00000477069 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.06
NUP188-205ENST00000477069 DPM2O94777 84 aa8.46□□□□□ -1.06
NUP188-205ENST00000477069 CRYGDP07320 174 aa8.46□□□□□ -1.06
NUP188-205ENST00000477069 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.06
NUP188-205ENST00000477069 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
NUP188-205ENST00000477069 MORN3Q6PF18 240 aaPredicted RBP8.45□□□□□ -1.06
NUP188-205ENST00000477069 C12orf54Q6X4T0 127 aa8.45□□□□□ -1.06
NUP188-205ENST00000477069 SYT8Q8NBV8 401 aa8.45□□□□□ -1.06
NUP188-205ENST00000477069 MRPL35Q9NZE8 188 aaKnown RBP8.45□□□□□ -1.06
NUP188-205ENST00000477069 TRGV11A0A075B6L2 103 aa8.45□□□□□ -1.06
NUP188-205ENST00000477069 IGKV2D-26A0A0A0MRZ7 120 aa8.45□□□□□ -1.06
NUP188-205ENST00000477069 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.45□□□□□ -1.06
NUP188-205ENST00000477069 SIVA1O15304 175 aa8.45□□□□□ -1.06
NUP188-205ENST00000477069 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
NUP188-205ENST00000477069 RNASE1P07998 156 aaKnown RBP8.44□□□□□ -1.06
NUP188-205ENST00000477069 CD28P10747 220 aa8.44□□□□□ -1.06
NUP188-205ENST00000477069 CD300EQ496F6 205 aaPredicted RBP8.44□□□□□ -1.06
NUP188-205ENST00000477069 NEXN-AS1Q8NBZ9 246 aa8.44□□□□□ -1.06
NUP188-205ENST00000477069 C16orf95Q9H693 158 aa8.44□□□□□ -1.06
NUP188-205ENST00000477069 TCTAP57738 103 aa8.44□□□□□ -1.06
NUP188-205ENST00000477069 C2orf66Q6UXQ4 117 aa8.44□□□□□ -1.06
NUP188-205ENST00000477069 Q6ZVH6 145 aa8.44□□□□□ -1.06
NUP188-205ENST00000477069 DYNLRB2Q8TF09 96 aa8.44□□□□□ -1.06
NUP188-205ENST00000477069 COX11Q9Y6N1 276 aa8.44□□□□□ -1.06
NUP188-205ENST00000477069 M0QY20 66 aa8.43□□□□□ -1.06
NUP188-205ENST00000477069 NEGR1Q7Z3B1 354 aa8.43□□□□□ -1.06
NUP188-205ENST00000477069 ORAOV1Q8WV07 137 aa8.43□□□□□ -1.06
NUP188-205ENST00000477069 SPAG8Q99932 426 aaPredicted RBP8.43□□□□□ -1.06
NUP188-205ENST00000477069 YAE1D1Q9NRH1 226 aa8.43□□□□□ -1.06
NUP188-205ENST00000477069 TRBV27A0A0K0K1C4 114 aa8.43□□□□□ -1.06
NUP188-205ENST00000477069 SCGB3A1Q96QR1 104 aa8.43□□□□□ -1.06
NUP188-205ENST00000477069 NMUP48645 174 aa8.43□□□□□ -1.06
NUP188-205ENST00000477069 CBY3A6NI87 242 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 F8VRH5 84 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 PLNP26678 52 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 ZC2HC1BQ5TFG8 222 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 ZFP2Q6ZN57 461 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 LINC01006Q8NI28 216 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 BAALCQ8WXS3 180 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 CLUHP3Q96NS8 147 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 LINC00467Q9BRT7 94 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 TRAV25A0A0B4J276 109 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 TAX1BP3O14907 124 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 RIPPLY3P57055 190 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 FAM74A4Q5TZK3 123 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 ERASQ7Z444 233 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 EDA2RQ9HAV5 297 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 TMEM160Q9NX00 188 aa8.42□□□□□ -1.06
NUP188-205ENST00000477069 F5H697 171 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 H7C1H1 209 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 CCL24O00175 119 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 VCYO14598 125 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 TSHBP01222 138 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 ODF3L2Q3SX64 289 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 ZNF876PQ49A33 203 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 TMEM97Q5BJF2 176 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 GTSCR1Q86UQ5 136 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 JMJD8Q96S16 334 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 SDHAF1A6NFY7 115 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 RNF151Q2KHN1 245 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 C11orf44Q8N8P7 122 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 CITED2Q99967 270 aaPredicted RBP8.41□□□□□ -1.06
NUP188-205ENST00000477069 NF1P21359 2839 aa8.41□□□□□ -1.06
NUP188-205ENST00000477069 ZNF56Q15929 161 aa8.4□□□□□ -1.06
NUP188-205ENST00000477069 UFSP1Q6NVU6 142 aa8.4□□□□□ -1.06
NUP188-205ENST00000477069 PTH2Q96A98 100 aa8.4□□□□□ -1.06
NUP188-205ENST00000477069 A0A1W2PRX2 142 aa8.4□□□□□ -1.06
NUP188-205ENST00000477069 LINC01549A6NIU2 74 aa8.4□□□□□ -1.07
NUP188-205ENST00000477069 HSD52Q0P140 79 aa8.4□□□□□ -1.07
NUP188-205ENST00000477069 PIK3CD-AS1Q5SR53 167 aa8.4□□□□□ -1.07
NUP188-205ENST00000477069 TRPT1Q86TN4 253 aaKnown RBP8.4□□□□□ -1.07
NUP188-205ENST00000477069 TTTY13Q9BZ97 58 aa8.4□□□□□ -1.07
NUP188-205ENST00000477069 HIGD1BQ9P298 99 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms