RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 MALP21145 153 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 UBE2D3P61077 147 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 UBE2D2P62837 147 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 GAGE2BQ13066 116 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 KLK9Q2XQG4 91 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 GAGE2EQ4V326 116 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 LYRM7Q5U5X0 104 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 DYNLRB1Q9NP97 96 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 GAGE2DQ9UEU5 116 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 KLK9Q9UKQ9 250 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 RHODO00212 210 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 C11orf71Q6IPW1 123 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 ABCA4P78363 2273 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 A0A1W2PPR1 153 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 CD7P09564 240 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 ZFAND3Q9H8U3 227 aa6.38□□□□□ -1.39
VAPB-205ENST00000476395 A8MWV9 139 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 IFITM1P13164 125 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 UBE2D1P51668 147 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 ADORA2A-AS1P86434 159 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 HES1Q14469 280 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 MYOZ3Q8TDC0 251 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 TEX49A0A1B0GTD5 131 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 NPFFO15130 113 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 EIF4EBP3O60516 100 aaPredicted RBP6.37□□□□□ -1.39
VAPB-205ENST00000476395 SRD5A1P18405 259 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 ZFP36P26651 326 aaKnown RBP6.37□□□□□ -1.39
VAPB-205ENST00000476395 EBI3Q14213 229 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 IL17RELQ6ZVW7 336 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 RASL10AQ92737 203 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 AAMDCQ9H7C9 122 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 IGHV7-81A0A0B4J1V7 117 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 SCGB1C2P0DMR2 95 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 KLRB1Q12918 225 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 NDUFA11Q86Y39 141 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 RNF182Q8N6D2 247 aa6.37□□□□□ -1.39
VAPB-205ENST00000476395 NXT2Q9NPJ8 142 aaKnown RBP6.37□□□□□ -1.39
VAPB-205ENST00000476395 CFC1BP0CG36 223 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 CFC1P0CG37 223 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 LY6DQ14210 128 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 Q8N8P6 123 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 NRACQ8N912 160 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 ABCA2Q9BZC7 2435 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 IGHV3OR16-13A0A075B7E8 117 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 IGHV3-74A0A0B4J1X5 117 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 IGKV3D-20A0A0C4DH25 116 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 NTN5Q8WTR8 489 aaPredicted RBP6.36□□□□□ -1.39
VAPB-205ENST00000476395 CHCHD5Q9BSY4 110 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 DPM3Q9P2X0 92 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 F8VRH5 84 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 SNCGO76070 127 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 TSPEAR-AS2P59090 65 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 LAGE3Q14657 143 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 TMEM190Q8WZ59 177 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 C20orf173Q96LM9 149 aa6.36□□□□□ -1.39
VAPB-205ENST00000476395 CHD6Q8TD26 2715 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 IGHV3-66A0A0C4DH42 116 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 IGHV7-4-1A0A0J9YVY3 117 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 FAM236DA0A1B0GTK5 79 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 SLC25A20O43772 301 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 FAM236CP0DP71 79 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 FBXL19-AS1Q494R0 122 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 DGAT2L7PQ6IED9 249 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 ZNF462Q96JM2 2506 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 HIVEP3Q5T1R4 2406 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 C14orf178Q8N769 122 aaPredicted RBP6.35□□□□□ -1.39
VAPB-205ENST00000476395 Q8N9W7 124 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 RPL39LQ96EH5 51 aaKnown RBP6.35□□□□□ -1.39
VAPB-205ENST00000476395 CCDC140Q96MF4 163 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 ODF3Q96PU9 254 aa6.35□□□□□ -1.39
VAPB-205ENST00000476395 ANKHD1Q8IWZ3 2542 aaKnown RBP6.35□□□□□ -1.39
VAPB-205ENST00000476395 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 RNF223E7ERA6 249 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 PLGLAQ15195 96 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 C10orf126Q8N4M7 172 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 C21orf62Q9NYP8 219 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 H7C1H1 209 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 IGHV4-39P01824 125 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 PLNP26678 52 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 PRR9Q5T870 116 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 Q8N1Y9 231 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 C15orf53Q8NAA6 179 aa6.34□□□□□ -1.39
VAPB-205ENST00000476395 BUB3O43684 328 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 COX6B1P14854 86 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 VMO1Q7Z5L0 202 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 SCGB3A1Q96QR1 104 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 FAM208BQ5VWN6 2430 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 LRRK2Q5S007 2527 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 ZNRF2Q8NHG8 242 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 USP9XQ93008 2570 aaPredicted RBP6.33□□□□□ -1.4
VAPB-205ENST00000476395 M0R1W7 72 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 SBSPONQ8IVN8 264 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 PRORYQ9H606 182 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 SPG11Q96JI7 2443 aa6.33□□□□□ -1.4
VAPB-205ENST00000476395 IGHV3-64A0A075B6Q5 118 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 IGHV3-49A0A0A0MS15 119 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 A0A0J9YY99 117 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 NEXN-AS1Q8NBZ9 246 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 A0A1B0GX51 115 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 C11orf86A6NJI1 115 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms