RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 TMEM14CQ9P0S9 112 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 TP73-AS1Q9UF72 201 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 UFC1Q9Y3C8 167 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 GOLT1BQ9Y3E0 138 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 DNAH6Q9C0G6 4158 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 IGLV11-55A0A075B6I3 123 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 TRBV19A0A075B6N1 114 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 IGKV2-40A0A087WW87 121 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-206ENST00000476045 LOC102724200A0A096LPH7 203 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-206ENST00000476045 IGHV1-24A0A0C4DH33 117 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 C20orf202A1L168 122 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 TMEM213A2RRL7 107 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 TMEM189A5PLL7 270 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 OR4C46A6NHA9 309 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 M0R3E3 92 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 GNG7O60262 68 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 IGKV2D-40P01614 121 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-206ENST00000476045 IGLV2-11P01706 119 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 TRBV12-3P01733 135 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 IL4P05112 153 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 ARMS2P0C7Q2 107 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 HLA-DMBP28068 263 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 TSPOP30536 169 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 APOC4P55056 127 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 SIGLEC15Q6ZMC9 328 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 C9orf47Q6ZRZ4 202 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 FA2HQ7L5A8 372 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 ERASQ7Z444 233 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 BPIFA4PQ86YQ2 179 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 TMEM190Q8WZ59 177 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 SMIM12Q96EX1 92 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 ZNF414Q96IQ9 312 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 PMCHL2Q9BQD1 86 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 TMEM70Q9BUB7 260 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 DAZ1Q9NQZ3 744 aaKnown RBP3.13□□□□□ -1.91
VPS13D-206ENST00000476045 TP53TG1Q9Y2A0 90 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 LAMTOR2Q9Y2Q5 125 aa3.13□□□□□ -1.91
VPS13D-206ENST00000476045 IGHV3OR16-8A0A075B7F1 116 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 IGHV3-35A0A0C4DH35 117 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 TRBV6-1A0A0K0K1D8 114 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 LOC389332A0A1B0GUA5 103 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 A0A1B0GUT8 65 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 NUPR2A6NF83 97 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 OR11H12B2RN74 326 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 SYS1-DBNDD2H3BUS1 97 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 K7EQM0 130 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 NDUFA4O00483 81 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 MRPS12O15235 138 aaKnown RBP3.12□□□□□ -1.91
VPS13D-206ENST00000476045 SH2D1AO60880 128 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 LEPROTL1O95214 131 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 APOHP02749 345 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-206ENST00000476045 LINC00614P0C842 121 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 CSN1S1P47710 185 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 CRIP1P50238 77 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 CMC4P56277 68 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-206ENST00000476045 RELQ04864 619 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-206ENST00000476045 PSG3Q16557 428 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 DEFB114Q30KQ6 69 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 PET117Q6UWS5 81 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 TMEM61Q8N0U2 210 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 TMEM75Q8N9X5 138 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 KIR2DL5BQ8NHK3 375 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 ZNF502Q8TBZ5 544 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 CHCHD1Q96BP2 118 aaKnown RBP3.12□□□□□ -1.91
VPS13D-206ENST00000476045 GFRA4Q9GZZ7 299 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 TMEM191AQ9H0A3 160 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 C21orf62Q9NYP8 219 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 ZFP30Q9Y2G7 519 aa3.12□□□□□ -1.91
VPS13D-206ENST00000476045 MRPS16Q9Y3D3 137 aaKnown RBP3.12□□□□□ -1.91
VPS13D-206ENST00000476045 HECTD4Q9Y4D8 3996 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 TRAV30A0A087WSZ9 112 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 IGHV3-66A0A0C4DH42 116 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 OR2T8A6NH00 312 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 HSBP1L1C9JCN9 74 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 NCR2O95944 276 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 OR5AL1P0C617 328 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 CT45A10P0DMU9 189 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 GPR183P32249 361 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 TCTAP57738 103 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 FXYD7P58549 80 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 GAGE1Q13065 139 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 ERCC8Q13216 396 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 LYZL1Q6UWQ5 148 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 CLEC19AQ6UXS0 136 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 OR8A1Q8NGG7 326 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 Q8TAT8 98 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 RNF183Q96D59 192 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 VGLL1Q99990 258 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 NDFIP1Q9BT67 221 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 MAP1LC3CQ9BXW4 147 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 AAMDCQ9H7C9 122 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 ST20Q9HBF5 79 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 HSPB8Q9UJY1 196 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 RNF24Q9Y225 148 aa3.11□□□□□ -1.91
VPS13D-206ENST00000476045 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
VPS13D-206ENST00000476045 FRAS1Q86XX4 4008 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 IGHV3OR16-13A0A075B7E8 117 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 IGHV3-49A0A0A0MS15 119 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms