RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 IER3IP1Q9Y5U9 82 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 QRICH2Q9H0J4 1663 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 NINQ8N4C6 2090 aa1.98□□□□□ -2.09
SMC5-203ENST00000475540 MYO18AQ92614 2054 aaKnown RBP1.98□□□□□ -2.09
SMC5-203ENST00000475540 BCORL1Q5H9F3 1711 aa1.98□□□□□ -2.09
SMC5-203ENST00000475540 A6NIN4 97 aa1.98□□□□□ -2.09
SMC5-203ENST00000475540 RPL37AP61513 92 aaKnown RBP1.98□□□□□ -2.09
SMC5-203ENST00000475540 MRPL54Q6P161 138 aaKnown RBP1.98□□□□□ -2.09
SMC5-203ENST00000475540 Q6ZS92 163 aa1.98□□□□□ -2.09
SMC5-203ENST00000475540 DEFB119Q8N690 84 aa1.98□□□□□ -2.09
SMC5-203ENST00000475540 LSM10Q969L4 123 aaKnown RBP1.98□□□□□ -2.09
SMC5-203ENST00000475540 PTPRMP28827 1452 aa1.98□□□□□ -2.09
SMC5-203ENST00000475540 CDK12Q9NYV4 1490 aaPredicted RBP1.98□□□□□ -2.09
SMC5-203ENST00000475540 TENM1Q9UKZ4 2725 aa1.98□□□□□ -2.09
SMC5-203ENST00000475540 CHD3Q12873 2000 aaKnown RBP1.98□□□□□ -2.09
SMC5-203ENST00000475540 TNRC6AQ8NDV7 1962 aaKnown RBP1.98□□□□□ -2.09
SMC5-203ENST00000475540 HIGD1CA8MV81 97 aa1.97□□□□□ -2.09
SMC5-203ENST00000475540 RBP2P50120 134 aa1.97□□□□□ -2.09
SMC5-203ENST00000475540 RPRMQ9NS64 109 aa1.97□□□□□ -2.09
SMC5-203ENST00000475540 ARL14EPLP0DKL9 152 aa1.96□□□□□ -2.1
SMC5-203ENST00000475540 CBLN1P23435 193 aa1.96□□□□□ -2.1
SMC5-203ENST00000475540 CATR1Q13166 79 aa1.96□□□□□ -2.1
SMC5-203ENST00000475540 C9orf116Q5BN46 136 aaPredicted RBP1.96□□□□□ -2.1
SMC5-203ENST00000475540 GTF2H5Q6ZYL4 71 aa1.96□□□□□ -2.1
SMC5-203ENST00000475540 MAPKBP1O60336 1514 aa1.96□□□□□ -2.1
SMC5-203ENST00000475540 CTTNBP2Q8WZ74 1663 aa1.96□□□□□ -2.1
SMC5-203ENST00000475540 PZPP20742 1482 aa1.95□□□□□ -2.1
SMC5-203ENST00000475540 IGKV2-29A2NJV5 120 aaPredicted RBP1.95□□□□□ -2.1
SMC5-203ENST00000475540 IFNA17P01571 189 aa1.95□□□□□ -2.1
SMC5-203ENST00000475540 CCKP06307 115 aa1.95□□□□□ -2.1
SMC5-203ENST00000475540 C9orf153Q5TBE3 101 aa1.95□□□□□ -2.1
SMC5-203ENST00000475540 SBSPONQ8IVN8 264 aa1.95□□□□□ -2.1
SMC5-203ENST00000475540 TCRBV3S1A0A5B6 114 aa1.94□□□□□ -2.1
SMC5-203ENST00000475540 TFF1P04155 84 aa1.94□□□□□ -2.1
SMC5-203ENST00000475540 NPC2P61916 151 aa1.94□□□□□ -2.1
SMC5-203ENST00000475540 UBE2G1P62253 170 aa1.94□□□□□ -2.1
SMC5-203ENST00000475540 IFI27L1Q96BM0 104 aa1.94□□□□□ -2.1
SMC5-203ENST00000475540 LAMB1P07942 1786 aa1.94□□□□□ -2.1
SMC5-203ENST00000475540 CCNB3Q8WWL7 1395 aa1.94□□□□□ -2.1
SMC5-203ENST00000475540 PHRF1Q9P1Y6 1649 aaKnown RBP1.94□□□□□ -2.1
SMC5-203ENST00000475540 NRKQ7Z2Y5 1582 aa1.93□□□□□ -2.1
SMC5-203ENST00000475540 TEX49A0A1B0GTD5 131 aa1.93□□□□□ -2.1
SMC5-203ENST00000475540 S100A7L2Q5SY68 101 aa1.93□□□□□ -2.1
SMC5-203ENST00000475540 DEFB132Q7Z7B7 95 aa1.93□□□□□ -2.1
SMC5-203ENST00000475540 SVBPQ8N300 66 aa1.93□□□□□ -2.1
SMC5-203ENST00000475540 Q8N8P6 123 aa1.93□□□□□ -2.1
SMC5-203ENST00000475540 C10orf105Q8TEF2 133 aa1.93□□□□□ -2.1
SMC5-203ENST00000475540 TSKUQ8WUA8 353 aa1.93□□□□□ -2.1
SMC5-203ENST00000475540 SMARCA2P51531 1590 aa1.93□□□□□ -2.1
SMC5-203ENST00000475540 ZNF142P52746 1687 aaPredicted RBP1.93□□□□□ -2.1
SMC5-203ENST00000475540 TRAV12-3A0A0B4J271 114 aa1.92□□□□□ -2.1
SMC5-203ENST00000475540 FXYD4P59646 89 aa1.92□□□□□ -2.1
SMC5-203ENST00000475540 CYP2G1PQ6ZSU1 146 aa1.92□□□□□ -2.1
SMC5-203ENST00000475540 C8orf59Q8N0T1 100 aaPredicted RBP1.92□□□□□ -2.1
SMC5-203ENST00000475540 AMELYQ99218 206 aa1.92□□□□□ -2.1
SMC5-203ENST00000475540 COA4Q9NYJ1 87 aa1.92□□□□□ -2.1
SMC5-203ENST00000475540 SDK1Q7Z5N4 2213 aa1.92□□□□□ -2.1
SMC5-203ENST00000475540 IFT140Q96RY7 1462 aa1.92□□□□□ -2.1
SMC5-203ENST00000475540 SETBP1Q9Y6X0 1596 aa1.92□□□□□ -2.1
SMC5-203ENST00000475540 CASP8AP2Q9UKL3 1982 aa1.92□□□□□ -2.1
SMC5-203ENST00000475540 VPS8Q8N3P4 1428 aa1.91□□□□□ -2.1
SMC5-203ENST00000475540 TRBV10-3A0A0K0K1G6 114 aa1.91□□□□□ -2.1
SMC5-203ENST00000475540 S100A8P05109 93 aa1.91□□□□□ -2.1
SMC5-203ENST00000475540 XAF1Q6GPH4 301 aa1.91□□□□□ -2.1
SMC5-203ENST00000475540 PEAK1Q9H792 1746 aa1.91□□□□□ -2.1
SMC5-203ENST00000475540 E9PCH4 1651 aa1.9□□□□□ -2.1
SMC5-203ENST00000475540 THOC2Q8NI27 1593 aaKnown RBP1.9□□□□□ -2.1
SMC5-203ENST00000475540 LOC101927531A0A1B0GV80 90 aa1.9□□□□□ -2.11
SMC5-203ENST00000475540 TMEM218A2RU14 115 aa1.9□□□□□ -2.11
SMC5-203ENST00000475540 HSD52Q0P140 79 aa1.9□□□□□ -2.11
SMC5-203ENST00000475540 C4orf33Q8N1A6 199 aa1.9□□□□□ -2.11
SMC5-203ENST00000475540 ZFYVE16Q7Z3T8 1539 aa1.9□□□□□ -2.11
SMC5-203ENST00000475540 HELZ2Q9BYK8 2649 aaKnown RBP1.89□□□□□ -2.11
SMC5-203ENST00000475540 PRRC2BQ5JSZ5 2229 aaKnown RBP1.89□□□□□ -2.11
SMC5-203ENST00000475540 OOSP1A8MZH6 123 aa1.89□□□□□ -2.11
SMC5-203ENST00000475540 IFITM1P13164 125 aa1.89□□□□□ -2.11
SMC5-203ENST00000475540 INSL4Q14641 139 aa1.89□□□□□ -2.11
SMC5-203ENST00000475540 FXYD3Q14802 87 aa1.89□□□□□ -2.11
SMC5-203ENST00000475540 ACBD7Q8N6N7 88 aa1.89□□□□□ -2.11
SMC5-203ENST00000475540 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
SMC5-203ENST00000475540 DLEC1Q9Y238 1755 aa1.89□□□□□ -2.11
SMC5-203ENST00000475540 BLMP54132 1417 aaPredicted RBP1.89□□□□□ -2.11
SMC5-203ENST00000475540 MUC22E2RYF6 1773 aaPredicted RBP1.88□□□□□ -2.11
SMC5-203ENST00000475540 TRAV30A0A087WSZ9 112 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 NBDYA0A0U1RRE5 68 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 FAM24AA6NFZ4 105 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 RBM3P98179 157 aaKnown RBP1.88□□□□□ -2.11
SMC5-203ENST00000475540 Q6ZQY7 126 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 PPP1R1CQ8WVI7 109 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 C10orf82Q8WW14 230 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 AQP10Q96PS8 301 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 DSCR8Q96T75 97 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 CNTLNQ9NXG0 1405 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 TRANK1O15050 2925 aa1.88□□□□□ -2.11
SMC5-203ENST00000475540 RBBP6Q7Z6E9 1792 aaKnown RBP1.87□□□□□ -2.11
SMC5-203ENST00000475540 RREB1Q92766 1687 aa1.87□□□□□ -2.11
SMC5-203ENST00000475540 ZGRF1Q86YA3 2104 aa1.87□□□□□ -2.11
SMC5-203ENST00000475540 TET1Q8NFU7 2136 aa1.87□□□□□ -2.11
SMC5-203ENST00000475540 A0A0C4DFX4 3053 aa1.87□□□□□ -2.11
SMC5-203ENST00000475540 NCR3O14931 201 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms