RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 SYT8Q8NBV8 401 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 TMEM158Q8WZ71 300 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 GOLT1BQ9Y3E0 138 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 HIVEP2P31629 2446 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 TRGV11A0A075B6L2 103 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 hDV102S1A0JD36 115 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 RBMY1BA6NDE4 496 aaKnown RBP11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 RBMY1EA6NEQ0 496 aaKnown RBP11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 CBY3A6NI87 242 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 RBMY1DP0C7P1 496 aaKnown RBP11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 LAGE3Q14657 143 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 RPL39LQ96EH5 51 aaKnown RBP11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 C18orf15Q96N68 181 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 C20orf78Q9BR46 151 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 SMIM2Q9BVW6 85 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 JPT2Q9H910 190 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 KIF25-AS1Q9Y6Z4 181 aa11.34□□□□□ -0.59
RPUSD3-215ENST00000475470 HINT1P49773 126 aaPredicted RBP11.33□□□□□ -0.6
RPUSD3-215ENST00000475470 SUMO2P61956 95 aaKnown RBP11.33□□□□□ -0.6
RPUSD3-215ENST00000475470 TP73-AS1Q9UF72 201 aa11.33□□□□□ -0.6
RPUSD3-215ENST00000475470 PPP1R17O96001 155 aa11.33□□□□□ -0.6
RPUSD3-215ENST00000475470 RBMY1A1P0DJD3 496 aaKnown RBP11.33□□□□□ -0.6
RPUSD3-215ENST00000475470 RBMY1CP0DJD4 496 aa11.33□□□□□ -0.6
RPUSD3-215ENST00000475470 RBMY1FQ15415 496 aaKnown RBP11.33□□□□□ -0.6
RPUSD3-215ENST00000475470 POM121L12Q8N7R1 296 aa11.33□□□□□ -0.6
RPUSD3-215ENST00000475470 A0A087WWL8 130 aa11.32□□□□□ -0.6
RPUSD3-215ENST00000475470 HTN1P15515 57 aa11.32□□□□□ -0.6
RPUSD3-215ENST00000475470 PROK1P58294 105 aa11.32□□□□□ -0.6
RPUSD3-215ENST00000475470 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
RPUSD3-215ENST00000475470 LINC00315P59091 139 aa11.31□□□□□ -0.6
RPUSD3-215ENST00000475470 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
RPUSD3-215ENST00000475470 LGALS9CQ6DKI2 356 aa11.31□□□□□ -0.6
RPUSD3-215ENST00000475470 F5H697 171 aa11.31□□□□□ -0.6
RPUSD3-215ENST00000475470 NSUN5P1Q3KNT7 163 aa11.31□□□□□ -0.6
RPUSD3-215ENST00000475470 WNK1Q9H4A3 2382 aa11.3□□□□□ -0.6
RPUSD3-215ENST00000475470 FOSL1P15407 271 aa11.3□□□□□ -0.6
RPUSD3-215ENST00000475470 NUDT3O95989 172 aa11.3□□□□□ -0.6
RPUSD3-215ENST00000475470 GAGE1Q13065 139 aa11.3□□□□□ -0.6
RPUSD3-215ENST00000475470 ODF3L2Q3SX64 289 aa11.3□□□□□ -0.6
RPUSD3-215ENST00000475470 FAM74A4Q5TZK3 123 aa11.3□□□□□ -0.6
RPUSD3-215ENST00000475470 Q6ZVH6 145 aa11.3□□□□□ -0.6
RPUSD3-215ENST00000475470 SAP30O75446 220 aa11.29□□□□□ -0.6
RPUSD3-215ENST00000475470 ZNF876PQ49A33 203 aa11.29□□□□□ -0.6
RPUSD3-215ENST00000475470 SUMO4Q6EEV6 95 aa11.29□□□□□ -0.6
RPUSD3-215ENST00000475470 INAFM1C9JVW0 142 aa11.29□□□□□ -0.6
RPUSD3-215ENST00000475470 OR11H12B2RN74 326 aa11.28□□□□□ -0.6
RPUSD3-215ENST00000475470 PRSS1P07477 247 aa11.28□□□□□ -0.6
RPUSD3-215ENST00000475470 ORMDL2Q53FV1 153 aa11.28□□□□□ -0.6
RPUSD3-215ENST00000475470 ADARB2-AS1A8MUL3 147 aa11.28□□□□□ -0.6
RPUSD3-215ENST00000475470 ATP5LO75964 103 aa11.28□□□□□ -0.6
RPUSD3-215ENST00000475470 STHQ8IWL8 128 aa11.28□□□□□ -0.6
RPUSD3-215ENST00000475470 CSTL1Q9H114 145 aa11.28□□□□□ -0.6
RPUSD3-215ENST00000475470 MRPS16Q9Y3D3 137 aaKnown RBP11.28□□□□□ -0.6
RPUSD3-215ENST00000475470 NOTCH2Q04721 2471 aa11.27□□□□□ -0.6
RPUSD3-215ENST00000475470 K7EMI3 77 aa11.27□□□□□ -0.6
RPUSD3-215ENST00000475470 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.6
RPUSD3-215ENST00000475470 LINC01587Q99440 93 aa11.27□□□□□ -0.6
RPUSD3-215ENST00000475470 INSP01308 110 aa11.27□□□□□ -0.61
RPUSD3-215ENST00000475470 ZNF56Q15929 161 aa11.27□□□□□ -0.61
RPUSD3-215ENST00000475470 SETD2Q9BYW2 2564 aaPredicted RBP11.27□□□□□ -0.61
RPUSD3-215ENST00000475470 CRYGDP07320 174 aa11.26□□□□□ -0.61
RPUSD3-215ENST00000475470 DKK2Q9UBU2 259 aa11.26□□□□□ -0.61
RPUSD3-215ENST00000475470 PRM2P04554 102 aa11.25□□□□□ -0.61
RPUSD3-215ENST00000475470 CMC4P56277 68 aaPredicted RBP11.25□□□□□ -0.61
RPUSD3-215ENST00000475470 ZNF415Q09FC8 603 aa11.25□□□□□ -0.61
RPUSD3-215ENST00000475470 SLC25A34Q6PIV7 304 aa11.24□□□□□ -0.61
RPUSD3-215ENST00000475470 XCL2Q9UBD3 114 aa11.24□□□□□ -0.61
RPUSD3-215ENST00000475470 OTOGQ6ZRI0 2925 aa11.24□□□□□ -0.61
RPUSD3-215ENST00000475470 IGLV1-51P01701 117 aa11.24□□□□□ -0.61
RPUSD3-215ENST00000475470 RPL32P62910 135 aaKnown RBP11.24□□□□□ -0.61
RPUSD3-215ENST00000475470 NEGR1Q7Z3B1 354 aa11.24□□□□□ -0.61
RPUSD3-215ENST00000475470 NDUFA11Q86Y39 141 aa11.24□□□□□ -0.61
RPUSD3-215ENST00000475470 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 VCYO14598 125 aa11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 KRTAP10-3P60369 221 aa11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 ODF1Q14990 250 aa11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 TOMM6Q96B49 74 aa11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 M0QY20 66 aa11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 M0R2P5 195 aa11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 POLR2KP53803 58 aaKnown RBP11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 SCGB3A1Q96QR1 104 aa11.23□□□□□ -0.61
RPUSD3-215ENST00000475470 C2orf66Q6UXQ4 117 aa11.22□□□□□ -0.61
RPUSD3-215ENST00000475470 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
RPUSD3-215ENST00000475470 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.61
RPUSD3-215ENST00000475470 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
RPUSD3-215ENST00000475470 PF4P02776 101 aa11.21□□□□□ -0.61
RPUSD3-215ENST00000475470 ANKRD39Q53RE8 183 aa11.21□□□□□ -0.61
RPUSD3-215ENST00000475470 MPV17L2Q567V2 206 aa11.21□□□□□ -0.61
RPUSD3-215ENST00000475470 ERASQ7Z444 233 aa11.21□□□□□ -0.61
RPUSD3-215ENST00000475470 COX8AP10176 69 aa11.2□□□□□ -0.62
RPUSD3-215ENST00000475470 ZMAT4Q9H898 229 aa11.2□□□□□ -0.62
RPUSD3-215ENST00000475470 COX11Q9Y6N1 276 aa11.2□□□□□ -0.62
RPUSD3-215ENST00000475470 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
RPUSD3-215ENST00000475470 IGHV3OR16-12A0A075B7B8 117 aa11.2□□□□□ -0.62
RPUSD3-215ENST00000475470 A8MWV9 139 aa11.2□□□□□ -0.62
RPUSD3-215ENST00000475470 IGKCP01834 107 aa11.2□□□□□ -0.62
RPUSD3-215ENST00000475470 ORAOV1Q8WV07 137 aa11.2□□□□□ -0.62
RPUSD3-215ENST00000475470 TRBV27A0A0K0K1C4 114 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms