RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 ZNF503Q96F45 646 aa7.5□□□□□ -1.21
CDH23-211ENST00000475158 MUC22E2RYF6 1773 aaPredicted RBP7.5□□□□□ -1.21
CDH23-211ENST00000475158 TEX22C9J3V5 150 aa7.5□□□□□ -1.21
CDH23-211ENST00000475158 LINC01545Q5VT33 79 aa7.5□□□□□ -1.21
CDH23-211ENST00000475158 Q6ZUT4 128 aa7.5□□□□□ -1.21
CDH23-211ENST00000475158 NDUFA4O00483 81 aa7.49□□□□□ -1.21
CDH23-211ENST00000475158 CGB3P0DN86 165 aa7.49□□□□□ -1.21
CDH23-211ENST00000475158 CGB7P0DN87 165 aa7.49□□□□□ -1.21
CDH23-211ENST00000475158 IGLV11-55A0A075B6I3 123 aa7.49□□□□□ -1.21
CDH23-211ENST00000475158 KLF5Q13887 457 aaPredicted RBP7.49□□□□□ -1.21
CDH23-211ENST00000475158 ATXN8Q156A1 80 aa7.49□□□□□ -1.21
CDH23-211ENST00000475158 H3BMM0 161 aa7.49□□□□□ -1.21
CDH23-211ENST00000475158 P0C879 139 aa7.49□□□□□ -1.21
CDH23-211ENST00000475158 MALP21145 153 aa7.49□□□□□ -1.21
CDH23-211ENST00000475158 UBE2WQ96B02 151 aa7.49□□□□□ -1.21
CDH23-211ENST00000475158 CITED2Q99967 270 aaPredicted RBP7.49□□□□□ -1.21
CDH23-211ENST00000475158 AJUBAQ96IF1 538 aa7.48□□□□□ -1.21
CDH23-211ENST00000475158 A0A096LPF7 62 aa7.48□□□□□ -1.21
CDH23-211ENST00000475158 FGF6P10767 208 aa7.48□□□□□ -1.21
CDH23-211ENST00000475158 SHISA2Q6UWI4 295 aa7.48□□□□□ -1.21
CDH23-211ENST00000475158 INSP01308 110 aa7.48□□□□□ -1.21
CDH23-211ENST00000475158 LINC00322Q6ZN03 302 aaPredicted RBP7.48□□□□□ -1.21
CDH23-211ENST00000475158 IGHV1OR15-1A0A075B7D0 117 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 IGHV7-4-1A0A0J9YVY3 117 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 TRBV12-3P01733 135 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 DAZAP2Q15038 168 aaPredicted RBP7.47□□□□□ -1.21
CDH23-211ENST00000475158 SMIM2Q9BVW6 85 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 VWC2LB2RUY7 222 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 M0R2P5 195 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 BUB3O43684 328 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 RPL32P62910 135 aaKnown RBP7.47□□□□□ -1.21
CDH23-211ENST00000475158 TEN1Q86WV5 123 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 APRG1Q8IVJ8 170 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 RPL39LQ96EH5 51 aaKnown RBP7.47□□□□□ -1.21
CDH23-211ENST00000475158 SPANXB1Q9NS25 103 aaPredicted RBP7.47□□□□□ -1.21
CDH23-211ENST00000475158 IGKV1D-37A0A075B6S9 117 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 C10orf142B7Z368 130 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 HOXD3P31249 432 aaPredicted RBP7.47□□□□□ -1.21
CDH23-211ENST00000475158 ZNRF2Q8NHG8 242 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 MGAQ8IWI9 3026 aa7.47□□□□□ -1.21
CDH23-211ENST00000475158 MYMXA0A1B0GTQ4 84 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 PAX4O43316 350 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 INSL3P51460 131 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 PRIMA1Q86XR5 153 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 Q8N8P6 123 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 FANCD2OSQ96PS1 177 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 C19orf84I3L1E1 186 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 SLURP1P55000 103 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 ATRQ13535 2644 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 HIST2H2BDQ6DRA6 164 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 IGF2-ASQ6U949 168 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 C8orf31Q8N9H6 132 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 IGF2BP2-AS1Q96M15 143 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 PRADC1Q9BSG0 188 aa7.46□□□□□ -1.21
CDH23-211ENST00000475158 ANKRD17O75179 2603 aaKnown RBP7.46□□□□□ -1.22
CDH23-211ENST00000475158 UNQ9165/PRO28630Q6UXU0 137 aa7.46□□□□□ -1.22
CDH23-211ENST00000475158 TIMM21Q9BVV7 248 aa7.46□□□□□ -1.22
CDH23-211ENST00000475158 LINC00310P59036 64 aa7.46□□□□□ -1.22
CDH23-211ENST00000475158 CELSR3Q9NYQ7 3312 aa7.45□□□□□ -1.22
CDH23-211ENST00000475158 FREM2Q5SZK8 3169 aa7.45□□□□□ -1.22
CDH23-211ENST00000475158 LINC01619G3V211 115 aa7.45□□□□□ -1.22
CDH23-211ENST00000475158 TRACP01848 142 aa7.45□□□□□ -1.22
CDH23-211ENST00000475158 GATA3P23771 443 aa7.45□□□□□ -1.22
CDH23-211ENST00000475158 PRO1854Q9UHT4 67 aa7.45□□□□□ -1.22
CDH23-211ENST00000475158 WDFY3Q8IZQ1 3526 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 FAM236AA0A1B0GUQ0 79 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 FAM236BA0A1B0GV22 79 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 NDUFV3P56181 108 aaKnown RBP7.44□□□□□ -1.22
CDH23-211ENST00000475158 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 ANKRD29Q8N6D5 301 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 GATD1Q8NB37 220 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 LY6G5BQ8NDX9 201 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 HECTD1Q9ULT8 2610 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.44□□□□□ -1.22
CDH23-211ENST00000475158 DEFB121Q5J5C9 76 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 TRPT1Q86TN4 253 aaKnown RBP7.44□□□□□ -1.22
CDH23-211ENST00000475158 COPS9Q8WXC6 57 aa7.44□□□□□ -1.22
CDH23-211ENST00000475158 F8P00451 2351 aa7.43□□□□□ -1.22
CDH23-211ENST00000475158 PFN2P35080 140 aa7.43□□□□□ -1.22
CDH23-211ENST00000475158 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
CDH23-211ENST00000475158 NPBQ8NG41 125 aa7.43□□□□□ -1.22
CDH23-211ENST00000475158 CDSNQ15517 529 aa7.43□□□□□ -1.22
CDH23-211ENST00000475158 LINC01559Q495D7 138 aa7.43□□□□□ -1.22
CDH23-211ENST00000475158 C5orf56Q8N8D9 126 aa7.43□□□□□ -1.22
CDH23-211ENST00000475158 F8VRH5 84 aa7.43□□□□□ -1.22
CDH23-211ENST00000475158 M0QXV9 152 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 LOXL1Q08397 574 aaPredicted RBP7.42□□□□□ -1.22
CDH23-211ENST00000475158 TAL2Q16559 108 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 C10orf105Q8TEF2 133 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 JPT2Q9H910 190 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 PLEKHB2Q96CS7 222 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 VPREB3Q9UKI3 123 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 CCDC179H3BU77 68 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 J3KT08 172 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 GDF5OSQ5U4N7 250 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 MORN3Q6PF18 240 aaPredicted RBP7.42□□□□□ -1.22
CDH23-211ENST00000475158 ZNF80P51504 273 aaPredicted RBP7.42□□□□□ -1.22
CDH23-211ENST00000475158 Q8N976 141 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 TMEM126AQ9H061 195 aa7.42□□□□□ -1.22
CDH23-211ENST00000475158 MAST4O15021 2626 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms