RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FOXA3P55318 350 aaPredicted RBP4.85□□□□□ -1.63
LIMD1-204ENST00000474665 RPS20P60866 119 aaKnown RBP4.85□□□□□ -1.63
LIMD1-204ENST00000474665 SSTP61278 116 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 CT83Q5H943 113 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 C10orf91Q5T1B1 145 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 MAPKAPK5-AS1Q8N8E1 139 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 OR4C5Q8NGB2 326 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 SFRP2Q96HF1 295 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 FAM210BQ96KR6 192 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 NDUFAF3Q9BU61 184 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 KLK5Q9Y337 293 aaPredicted RBP4.85□□□□□ -1.63
LIMD1-204ENST00000474665 PHLDA3Q9Y5J5 127 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 A0A096LPF7 62 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 LOC100131303A0A0U1RQF7 123 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 A0A1W2PPQ1 181 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 A8MWV9 139 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 H3BNG1 76 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 ZFP2Q6ZN57 461 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 ZFP82Q8N141 532 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 SLC25A29Q8N8R3 303 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 OR10G8Q8NGN5 311 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 TSKUQ8WUA8 353 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 TPPP3Q9BW30 176 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 HHLA3Q9XRX5 114 aa4.84□□□□□ -1.63
LIMD1-204ENST00000474665 PKHD1P08F94 4074 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 DMBT1Q9UGM3 2413 aaPredicted RBP4.83□□□□□ -1.64
LIMD1-204ENST00000474665 TRGV4A0A0C4DH28 118 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 SMIM27A0A1W2PRY6 76 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 HIGD1CA8MV81 97 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 A8MWL6 223 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 F2Z2F3 143 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 PAX4O43316 350 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 P0DMU3 169 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 FAM231AP0DMU4 169 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 FAM231CP0DMU5 169 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 LINC00694P0DN24 101 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 NTF3P20783 257 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 EVI2AP22794 236 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 RNF212Q495C1 297 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 WDR73Q6P4I2 378 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 SLC7A5P1Q8MH63 180 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 C14orf178Q8N769 122 aaPredicted RBP4.83□□□□□ -1.64
LIMD1-204ENST00000474665 SYT8Q8NBV8 401 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 NUP35Q8NFH5 326 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 PGLYRP4Q96LB8 373 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 SEC11CQ9BY50 192 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 PRO0255Q9UI72 69 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 CARHSP1Q9Y2V2 147 aaKnown RBP4.83□□□□□ -1.64
LIMD1-204ENST00000474665 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 DNAH17Q9UFH2 4485 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 HSPG2P98160 4391 aa4.83□□□□□ -1.64
LIMD1-204ENST00000474665 XKRY2A2RUG3 117 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 FAM231BA6NCW3 169 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 F8W036 122 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 K7EQD1 137 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 TCTAP57738 103 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 CACNG7P62955 275 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 PNRC1Q12796 327 aaPredicted RBP4.82□□□□□ -1.64
LIMD1-204ENST00000474665 FAM74A4Q5TZK3 123 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 SPANXN1Q5VSR9 72 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 C15orf54Q8N8G6 183 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 GFRA4Q9GZZ7 299 aa4.82□□□□□ -1.64
LIMD1-204ENST00000474665 FAT2Q9NYQ8 4349 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 TRBV6-4A0A1B0GX49 114 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 RHODO00212 210 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 CIDEAO60543 219 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 NUDT3O95989 172 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 GYPEP15421 78 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 SLAQ13239 276 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 ESRGQ1W209 222 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 LGALS9CQ6DKI2 356 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 C15orf53Q8NAA6 179 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 LINC00588Q9Y4M8 146 aa4.81□□□□□ -1.64
LIMD1-204ENST00000474665 A0A1B0GUT8 65 aa4.8□□□□□ -1.64
LIMD1-204ENST00000474665 A0A1B0GXF2 115 aa4.8□□□□□ -1.64
LIMD1-204ENST00000474665 M0QY20 66 aa4.8□□□□□ -1.64
LIMD1-204ENST00000474665 GAS8-AS1O95177 125 aa4.8□□□□□ -1.64
LIMD1-204ENST00000474665 FAM3BP58499 235 aaPredicted RBP4.8□□□□□ -1.64
LIMD1-204ENST00000474665 RAB4BP61018 213 aa4.8□□□□□ -1.64
LIMD1-204ENST00000474665 TWIST1Q15672 202 aa4.8□□□□□ -1.64
LIMD1-204ENST00000474665 RNF185Q96GF1 192 aa4.8□□□□□ -1.64
LIMD1-204ENST00000474665 AP1S3Q96PC3 154 aa4.8□□□□□ -1.64
LIMD1-204ENST00000474665 TRAV26-2A0A0B4J265 109 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 C7orf77A4D0Y5 90 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 MT-ND4LP03901 98 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 RHOHQ15669 191 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 MRPL23Q16540 153 aaKnown RBP4.79□□□□□ -1.64
LIMD1-204ENST00000474665 SUMO4Q6EEV6 95 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 LYPD5Q6UWN5 251 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 LINC00336Q6ZUF6 198 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 Q8N1X5 172 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 NEXN-AS1Q8NBZ9 246 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 CLRN3Q8NCR9 226 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 ANAPC16Q96DE5 110 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 NAT8BQ9UHF3 227 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 ICOSQ9Y6W8 199 aa4.79□□□□□ -1.64
LIMD1-204ENST00000474665 GAGE12JA6NER3 117 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 PPP1R2P9O14990 202 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 TRGC1P0CF51 173 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 GAGE1Q13065 139 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms