RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TOMM6Q96B49 74 aa7.21□□□□□ -1.26
USP39-214ENST00000474572 CITED2Q99967 270 aaPredicted RBP7.21□□□□□ -1.26
USP39-214ENST00000474572 JPT2Q9H910 190 aa7.21□□□□□ -1.26
USP39-214ENST00000474572 TEX15Q9BXT5 2789 aa7.21□□□□□ -1.26
USP39-214ENST00000474572 AGRNO00468 2067 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 TRAV12-1A0A0B4J245 112 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 LINC01549A6NIU2 74 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 ADARB2-AS1A8MUL3 147 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 DLEU1O43261 78 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 PROK1P58294 105 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 ZNF124Q15973 351 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 ODF3L2Q3SX64 289 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 C18orf15Q96N68 181 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 JMJD8Q96S16 334 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 DKK2Q9UBU2 259 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 MXRA5Q9NR99 2828 aa7.2□□□□□ -1.26
USP39-214ENST00000474572 RIPPLY3P57055 190 aa7.19□□□□□ -1.26
USP39-214ENST00000474572 COL5A1-AS1Q5SY13 56 aa7.19□□□□□ -1.26
USP39-214ENST00000474572 HIST2H2BDQ6DRA6 164 aa7.19□□□□□ -1.26
USP39-214ENST00000474572 MORN3Q6PF18 240 aaPredicted RBP7.19□□□□□ -1.26
USP39-214ENST00000474572 C2orf91Q6ZV80 131 aa7.19□□□□□ -1.26
USP39-214ENST00000474572 BOD1L2Q8IYS8 172 aa7.19□□□□□ -1.26
USP39-214ENST00000474572 HHLA3Q9XRX5 114 aa7.19□□□□□ -1.26
USP39-214ENST00000474572 CENPEQ02224 2701 aa7.19□□□□□ -1.26
USP39-214ENST00000474572 ZNF469Q96JG9 3925 aaPredicted RBP7.19□□□□□ -1.26
USP39-214ENST00000474572 A0A087WX48 190 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 TRBV27A0A0K0K1C4 114 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 M0QY20 66 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 NUDT3O95989 172 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 IGKCP01834 107 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 ZNF415Q09FC8 603 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 STPG4Q8N801 248 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 FAM110AQ9BQ89 295 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 CSTL1Q9H114 145 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 TP73-AS1Q9UF72 201 aa7.18□□□□□ -1.26
USP39-214ENST00000474572 A0A087WWL8 130 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 CBY3A6NI87 242 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 VCYO14598 125 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 SIVA1O15304 175 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 DPM2O94777 84 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 PRSS1P07477 247 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 G0S2P27469 103 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 CMC4P56277 68 aaPredicted RBP7.17□□□□□ -1.26
USP39-214ENST00000474572 UFSP1Q6NVU6 142 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 C2orf66Q6UXQ4 117 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 TRPT1Q86TN4 253 aaKnown RBP7.17□□□□□ -1.26
USP39-214ENST00000474572 C11orf72Q8NBR9 251 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 NEXN-AS1Q8NBZ9 246 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 IL17DQ8TAD2 202 aa7.17□□□□□ -1.26
USP39-214ENST00000474572 NBPF19A0A087WUL8 3843 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 A0A1W2PRX2 142 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 SDHAF1A6NFY7 115 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 F8VRH5 84 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.16□□□□□ -1.26
USP39-214ENST00000474572 M0R2P5 195 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 LY6G6DO95868 133 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 INSP01308 110 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 IGLV1-51P01701 117 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 ZNF876PQ49A33 203 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 ZFP2Q6ZN57 461 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 ERASQ7Z444 233 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 LINC00469Q8N7U9 141 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 C11orf44Q8N8P7 122 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 SCGB3A1Q96QR1 104 aa7.16□□□□□ -1.26
USP39-214ENST00000474572 MRPL35Q9NZE8 188 aaKnown RBP7.16□□□□□ -1.26
USP39-214ENST00000474572 ZMAT5Q9UDW3 170 aaKnown RBP7.16□□□□□ -1.26
USP39-214ENST00000474572 A8MWV9 139 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 OR11H12B2RN74 326 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.26
USP39-214ENST00000474572 RHOHQ15669 191 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 ZNF56Q15929 161 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 BATFQ16520 125 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 BEAN1Q3B7T3 259 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 NSUN5P1Q3KNT7 163 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 BVES-AS1Q5T3Y7 98 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 C12orf54Q6X4T0 127 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 BAALCQ8WXS3 180 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 TIMM17AQ99595 171 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 KIR2DL4Q99706 377 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 SMR3AQ99954 134 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 SPXQ9BT56 116 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 CYSLTR1Q9Y271 337 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 CHD6Q8TD26 2715 aa7.15□□□□□ -1.26
USP39-214ENST00000474572 IGIPA6NJ69 53 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 NACAE9PAV3 2078 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 F5H697 171 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 H7C1H1 209 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 FLNAP21333 2647 aaKnown RBP7.14□□□□□ -1.27
USP39-214ENST00000474572 PLNP26678 52 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 MPV17L2Q567V2 206 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 FAM74A4Q5TZK3 123 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 NDUFA11Q86Y39 141 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 STHQ8IWL8 128 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 C1orf158Q8N1D5 194 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 C19orf73Q9NVV2 129 aa7.14□□□□□ -1.27
USP39-214ENST00000474572 MAP1AP78559 2803 aaPredicted RBP7.13□□□□□ -1.27
USP39-214ENST00000474572 IGKV2D-26A0A0A0MRZ7 120 aa7.13□□□□□ -1.27
USP39-214ENST00000474572 RS1O15537 224 aa7.13□□□□□ -1.27
USP39-214ENST00000474572 TSHBP01222 138 aa7.13□□□□□ -1.27
USP39-214ENST00000474572 KRTAP10-3P60369 221 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms