RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 C19orf84I3L1E1 186 aa2.46□□□□□ -2.02
UBR3-208ENST00000474426 ZNF575Q86XF7 245 aa2.46□□□□□ -2.02
UBR3-208ENST00000474426 ORMDL3Q8N138 153 aa2.46□□□□□ -2.02
UBR3-208ENST00000474426 B9D2Q9BPU9 175 aa2.46□□□□□ -2.02
UBR3-208ENST00000474426 TET2Q6N021 2002 aaPredicted RBP2.45□□□□□ -2.02
UBR3-208ENST00000474426 TRAV7A0A075B6U4 112 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 IGHV3OR16-10A0A075B7F0 116 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 CFC1BP0CG36 223 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 CFC1P0CG37 223 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 PI3P19957 117 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 DYNAPQ8N1N2 210 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 Q8N6K4 173 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 FLVCR1-AS1Q8TAF5 88 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 KLF14Q8TD94 323 aaPredicted RBP2.45□□□□□ -2.02
UBR3-208ENST00000474426 PRAC1Q96KF2 57 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 DKK2Q9UBU2 259 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 SVILO95425 2214 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 LTBP1Q14766 1721 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 hDV103S1A0JD37 113 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 SDHAF1A6NFY7 115 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 TSHBP01222 138 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 TFF1P04155 84 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 LPAL2Q16609 132 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 C17orf58Q2M2W7 97 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 C9orf106Q8NAJ2 232 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 MSRB1Q9NZV6 116 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 COL5A1P20908 1838 aaPredicted RBP2.45□□□□□ -2.02
UBR3-208ENST00000474426 IGHV3-38A0A0C4DH36 116 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 CTXND1A0A1B0GTU2 59 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 LINC00271P0C7V0 271 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 FCER1GP30273 86 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 Q8IYB0 196 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 C20orf203Q8NBC4 194 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 ZNF318Q5VUA4 2279 aa2.45□□□□□ -2.02
UBR3-208ENST00000474426 IGHV3-16A0A0C4DH30 117 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 KRTAP16-1A8MUX0 517 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 IGLV3-21P80748 117 aaPredicted RBP2.44□□□□□ -2.02
UBR3-208ENST00000474426 LYPD6Q86Y78 171 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 RPRMLQ8N4K4 120 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 Q8N7P7 452 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 ZNF414Q96IQ9 312 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 TXNDC17Q9BRA2 123 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 SMAD5-AS1Q9Y6J3 95 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 FAM229AH3BQW9 127 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 PLA2G5P39877 138 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 MYO7BQ6PIF6 2116 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 MIR17HGQ75NE6 70 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 Q8N814 137 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 LINC00476Q8WZB0 136 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 RETNLBQ9BQ08 111 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 PRO1854Q9UHT4 67 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 SNURFQ9Y675 71 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 IGHV4-28A0A0C4DH34 117 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 FAM72CH0Y354 149 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 RPL28P46779 137 aaKnown RBP2.44□□□□□ -2.02
UBR3-208ENST00000474426 MOBPQ13875 183 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 PLGLAQ15195 96 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 FAM72AQ5TYM5 149 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 FAM72DQ6L9T8 149 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 Q6ZS52 159 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 FAM72BQ86X60 149 aa2.44□□□□□ -2.02
UBR3-208ENST00000474426 ANKRD17O75179 2603 aaKnown RBP2.44□□□□□ -2.02
UBR3-208ENST00000474426 SAA1P0DJI8 122 aaPredicted RBP2.43□□□□□ -2.02
UBR3-208ENST00000474426 SMIM11AP58511 58 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 MGAQ8IWI9 3026 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 TCF20Q9UGU0 1960 aaKnown RBP2.43□□□□□ -2.02
UBR3-208ENST00000474426 IGHV3-33P01772 117 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 CCL3P10147 92 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 TSPEAR-AS2P59090 65 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 PI4KAP42356 2102 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 IGHV4-61A0A0C4DH41 118 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 IGHV5-10-1A0A0J9YXX1 117 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 TRBV30A0A0K0K1B3 111 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 SCO2A0A1W2PP80 73 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 SH2D1AO60880 128 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 IGHV4-59P01825 116 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 LYZL2Q7Z4W2 148 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 PRSS3P2Q8NHM4 247 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 TAC3Q9UHF0 121 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 TIMM9Q9Y5J7 89 aa2.43□□□□□ -2.02
UBR3-208ENST00000474426 IGKV6D-41A0A0C4DH26 115 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 CHTF8P0CG12 524 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 IGHV4-30-4P0DP06 118 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 CMC4P56277 68 aaPredicted RBP2.42□□□□□ -2.02
UBR3-208ENST00000474426 RPL36AP83881 106 aaKnown RBP2.42□□□□□ -2.02
UBR3-208ENST00000474426 FXYD3Q14802 87 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 C9orf116Q5BN46 136 aaPredicted RBP2.42□□□□□ -2.02
UBR3-208ENST00000474426 BBC3Q96PG8 261 aaPredicted RBP2.42□□□□□ -2.02
UBR3-208ENST00000474426 TNRC6CQ9HCJ0 1690 aaKnown RBP2.42□□□□□ -2.02
UBR3-208ENST00000474426 CD24P25063 80 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 DYNLRB2Q8TF09 96 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 RELNP78509 3460 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 IGKV3D-7A0A0C4DH55 119 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 IGLV2-11P01706 119 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 IGHV3-48P01763 117 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 TMEM14BQ9NUH8 114 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 LAMA3Q16787 3333 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 PRR14LQ5THK1 2151 aa2.42□□□□□ -2.02
UBR3-208ENST00000474426 TRBV7-4A0A0J9YYF1 115 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms