RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 DEFB131AP59861 70 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 BATFQ16520 125 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 ODF3L2Q3SX64 289 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 FAM162BQ5T6X4 162 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 GDF5OSQ5U4N7 250 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 EBLN2Q6P2I7 272 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 KCNIP4Q6PIL6 250 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 FOXI2Q6ZQN5 318 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 FAM231DQ6ZW35 169 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 STPG4Q8N801 248 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 OR4C5Q8NGB2 326 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 OR2K2Q8NGT1 345 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 DAZAP1Q96EP5 407 aaKnown RBP4.68□□□□□ -1.66
HDAC1-205ENST00000472928 FAM110AQ9BQ89 295 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 VPS25Q9BRG1 176 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 RPP21Q9H633 154 aaKnown RBP4.68□□□□□ -1.66
HDAC1-205ENST00000472928 LAMTOR2Q9Y2Q5 125 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 V9GYV3 84 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 HERC1Q15751 4861 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 C19orf71A6NCJ1 209 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 OR11H12B2RN74 326 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 K7ERU9 68 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 CA1P00915 261 aaPredicted RBP4.67□□□□□ -1.66
HDAC1-205ENST00000472928 HLA-DRB4P13762 266 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 CTRLP40313 264 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 LEPP41159 167 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 OCIAD2Q56VL3 154 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 PRR9Q5T870 116 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 LINC00322Q6ZN03 302 aaPredicted RBP4.67□□□□□ -1.66
HDAC1-205ENST00000472928 LINC00477Q96M19 166 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 IL36BQ9NZH7 164 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 LENEPQ9Y5L5 61 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 HLA-DRB4X5D2U9 266 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 HSPG2P98160 4391 aa4.67□□□□□ -1.66
HDAC1-205ENST00000472928 TRAV9-1A0A075B6T8 112 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 TMSB15BA0A087X1C1 80 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 M0R2Z0 102 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 DUSP14O95147 198 aaKnown RBP4.66□□□□□ -1.66
HDAC1-205ENST00000472928 IGLC3P0DOY3 106 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 SCGB1A1P11684 91 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 ZNF80P51504 273 aaPredicted RBP4.66□□□□□ -1.66
HDAC1-205ENST00000472928 HNRNPA3P51991 378 aaKnown RBP4.66□□□□□ -1.66
HDAC1-205ENST00000472928 Q0VG73 95 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 Q6ZWC4 215 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 COX8CQ7Z4L0 72 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 APRG1Q8IVJ8 170 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 ZFAND2AQ8N6M9 145 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 ODF3Q96PU9 254 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 WFDC10AQ9H1F0 79 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 CST9LQ9H4G1 147 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 TRAPPC1Q9Y5R8 145 aa4.66□□□□□ -1.66
HDAC1-205ENST00000472928 NACAE9PAV3 2078 aa4.65□□□□□ -1.66
HDAC1-205ENST00000472928 TRBV7-9A0A0J9YWB2 115 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 C7orf71A4D174 169 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 H3BMM0 161 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 GPX1P07203 203 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 CD7P09564 240 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 CRISP2P16562 243 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 TSPOP30536 169 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 RNASE4P34096 147 aaKnown RBP4.65□□□□□ -1.67
HDAC1-205ENST00000472928 CRIP1P50238 77 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 SPINK13Q1W4C9 94 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 STHQ8IWL8 128 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 TMEM256Q8N2U0 113 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 TSKUQ8WUA8 353 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 FAM19A4Q96LR4 140 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 PAM16Q9Y3D7 125 aa4.65□□□□□ -1.67
HDAC1-205ENST00000472928 TRAV21A0A0B4J279 112 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 SMIM27A0A1W2PRY6 76 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 TMEM189A5PLL7 270 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 A8MTW9 85 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 FABP5P3A8MUU1 101 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 HIGD1CA8MV81 97 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 A8MWL6 223 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 KLLNB2CW77 178 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 SPRY2O43597 315 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 NUPR1O60356 82 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 ORM1P02763 201 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 FXYD7P58549 80 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 TDRG1Q3Y452 100 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 SPATA45Q537H7 98 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 DGAT2L7PQ6IED9 249 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 MRPL54Q6P161 138 aaKnown RBP4.64□□□□□ -1.67
HDAC1-205ENST00000472928 AMTNQ6UX39 209 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 Q6ZN92 141 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 GTSCR1Q86UQ5 136 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 Q8N976 141 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 TPPP3Q9BW30 176 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 C11orf21Q9P2W6 132 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 NAT8BQ9UHF3 227 aa4.64□□□□□ -1.67
HDAC1-205ENST00000472928 TRAV12-2A0A075B6T6 113 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 TRAV12-3A0A0B4J271 114 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 SPINK4O60575 86 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 CMC4P56277 68 aaPredicted RBP4.63□□□□□ -1.67
HDAC1-205ENST00000472928 MUC21Q5SSG8 566 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 Q6AWC8 147 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 CFAP161Q6P656 301 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 Q6ZQT7 251 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 TRPT1Q86TN4 253 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms