RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 Q8N814 137 aa10.19□□□□□ -0.78
VTI1A-203ENST00000472892 SYT8Q8NBV8 401 aa10.19□□□□□ -0.78
VTI1A-203ENST00000472892 STOML3Q8TAV4 291 aa10.19□□□□□ -0.78
VTI1A-203ENST00000472892 A0A087WWC5 75 aa10.18□□□□□ -0.78
VTI1A-203ENST00000472892 GRIFINA4D1Z8 144 aa10.18□□□□□ -0.78
VTI1A-203ENST00000472892 RHODO00212 210 aa10.18□□□□□ -0.78
VTI1A-203ENST00000472892 UBE2G1P62253 170 aa10.18□□□□□ -0.78
VTI1A-203ENST00000472892 CST9LP1Q5W188 147 aa10.18□□□□□ -0.78
VTI1A-203ENST00000472892 Q8N3U1 123 aa10.18□□□□□ -0.78
VTI1A-203ENST00000472892 OR11H4Q8NGC9 324 aa10.18□□□□□ -0.78
VTI1A-203ENST00000472892 SFRP2Q96HF1 295 aa10.18□□□□□ -0.78
VTI1A-203ENST00000472892 TM2D2Q9BX73 214 aa10.18□□□□□ -0.78
VTI1A-203ENST00000472892 KCNRGQ8N5I3 272 aa10.17□□□□□ -0.78
VTI1A-203ENST00000472892 FRZBQ92765 325 aa10.17□□□□□ -0.78
VTI1A-203ENST00000472892 TRAV8-3A0A0A6YYJ7 113 aa10.16□□□□□ -0.78
VTI1A-203ENST00000472892 SMLR1H3BR10 107 aa10.16□□□□□ -0.78
VTI1A-203ENST00000472892 INAFM2P0DMQ5 153 aa10.16□□□□□ -0.78
VTI1A-203ENST00000472892 ZNF345Q14585 488 aa10.16□□□□□ -0.78
VTI1A-203ENST00000472892 Q5VSD8 79 aa10.16□□□□□ -0.78
VTI1A-203ENST00000472892 MBD3L1Q8WWY6 194 aa10.16□□□□□ -0.78
VTI1A-203ENST00000472892 TMEM70Q9BUB7 260 aa10.16□□□□□ -0.78
VTI1A-203ENST00000472892 PHLDA3Q9Y5J5 127 aa10.16□□□□□ -0.78
VTI1A-203ENST00000472892 TMSB15BA0A087X1C1 80 aa10.15□□□□□ -0.78
VTI1A-203ENST00000472892 PAGE4O60829 102 aa10.15□□□□□ -0.78
VTI1A-203ENST00000472892 SEC11BP0C7V7 166 aa10.15□□□□□ -0.78
VTI1A-203ENST00000472892 TPT1P13693 172 aaKnown RBP10.15□□□□□ -0.78
VTI1A-203ENST00000472892 FAM74A4Q5TZK3 123 aa10.15□□□□□ -0.78
VTI1A-203ENST00000472892 DAZ4Q86SG3 579 aaKnown RBP10.15□□□□□ -0.78
VTI1A-203ENST00000472892 DAZ3Q9NR90 486 aaKnown RBP10.15□□□□□ -0.78
VTI1A-203ENST00000472892 A0A087WWL8 130 aa10.14□□□□□ -0.79
VTI1A-203ENST00000472892 UMAD1C9J7I0 102 aa10.14□□□□□ -0.79
VTI1A-203ENST00000472892 SMR3BP02814 79 aaPredicted RBP10.14□□□□□ -0.79
VTI1A-203ENST00000472892 S100A9P06702 114 aaKnown RBP10.14□□□□□ -0.79
VTI1A-203ENST00000472892 AKR1C3P42330 323 aa10.14□□□□□ -0.79
VTI1A-203ENST00000472892 TOR2AQ5JU69 321 aa10.14□□□□□ -0.79
VTI1A-203ENST00000472892 ZFP82Q8N141 532 aa10.14□□□□□ -0.79
VTI1A-203ENST00000472892 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
VTI1A-203ENST00000472892 TRBV10-1A0A0K0K1A3 114 aa10.13□□□□□ -0.79
VTI1A-203ENST00000472892 HMSDA8MTL9 139 aa10.13□□□□□ -0.79
VTI1A-203ENST00000472892 M0R381 172 aa10.13□□□□□ -0.79
VTI1A-203ENST00000472892 C1QBP02746 253 aa10.13□□□□□ -0.79
VTI1A-203ENST00000472892 WFDC2Q14508 124 aa10.13□□□□□ -0.79
VTI1A-203ENST00000472892 DNAH8Q96JB1 4490 aa10.13□□□□□ -0.79
VTI1A-203ENST00000472892 VPS13BQ7Z7G8 4022 aa10.13□□□□□ -0.79
VTI1A-203ENST00000472892 HERC1Q15751 4861 aa10.12□□□□□ -0.79
VTI1A-203ENST00000472892 NIT1Q86X76 327 aa10.12□□□□□ -0.79
VTI1A-203ENST00000472892 FAM213BQ8TBF2 198 aa10.12□□□□□ -0.79
VTI1A-203ENST00000472892 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
VTI1A-203ENST00000472892 FAM30AQ9NZY2 134 aa10.12□□□□□ -0.79
VTI1A-203ENST00000472892 COX11Q9Y6N1 276 aa10.12□□□□□ -0.79
VTI1A-203ENST00000472892 A0A0D9SG52 128 aa10.11□□□□□ -0.79
VTI1A-203ENST00000472892 HAMPP81172 84 aa10.11□□□□□ -0.79
VTI1A-203ENST00000472892 TRBV7-3A0A075B6L6 115 aa10.1□□□□□ -0.79
VTI1A-203ENST00000472892 FAM229AH3BQW9 127 aa10.1□□□□□ -0.79
VTI1A-203ENST00000472892 CXCL1P09341 107 aa10.1□□□□□ -0.79
VTI1A-203ENST00000472892 UBE2D3P61077 147 aa10.1□□□□□ -0.79
VTI1A-203ENST00000472892 UBE2D2P62837 147 aa10.1□□□□□ -0.79
VTI1A-203ENST00000472892 RPL36AP83881 106 aaKnown RBP10.1□□□□□ -0.79
VTI1A-203ENST00000472892 BAGE2Q86Y30 109 aa10.1□□□□□ -0.79
VTI1A-203ENST00000472892 OR10G8Q8NGN5 311 aa10.1□□□□□ -0.79
VTI1A-203ENST00000472892 RPL36ALQ969Q0 106 aaKnown RBP10.1□□□□□ -0.79
VTI1A-203ENST00000472892 SSBP4Q9BWG4 385 aaPredicted RBP10.1□□□□□ -0.79
VTI1A-203ENST00000472892 URGCP-MRPS24S4R325 110 aa10.1□□□□□ -0.79
VTI1A-203ENST00000472892 A0A1B0GV50 99 aa10.09□□□□□ -0.79
VTI1A-203ENST00000472892 SCO2A0A1W2PP80 73 aa10.09□□□□□ -0.79
VTI1A-203ENST00000472892 KANTRA0A1W2PQU2 76 aa10.09□□□□□ -0.79
VTI1A-203ENST00000472892 BCL2L11O43521 198 aa10.09□□□□□ -0.79
VTI1A-203ENST00000472892 H2AFB1P0C5Y9 115 aa10.09□□□□□ -0.79
VTI1A-203ENST00000472892 RAB4BP61018 213 aa10.09□□□□□ -0.79
VTI1A-203ENST00000472892 RMI2Q96E14 147 aa10.09□□□□□ -0.79
VTI1A-203ENST00000472892 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
VTI1A-203ENST00000472892 ZNF471Q9BX82 626 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-203ENST00000472892 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
VTI1A-203ENST00000472892 LECT2O14960 151 aa10.08□□□□□ -0.8
VTI1A-203ENST00000472892 SNAI2O43623 268 aa10.08□□□□□ -0.8
VTI1A-203ENST00000472892 PFDN1O60925 122 aa10.08□□□□□ -0.8
VTI1A-203ENST00000472892 RPL19P84098 196 aaKnown RBP10.08□□□□□ -0.8
VTI1A-203ENST00000472892 PRR27Q6MZM9 219 aa10.08□□□□□ -0.8
VTI1A-203ENST00000472892 TMUB2Q71RG4 321 aa10.08□□□□□ -0.8
VTI1A-203ENST00000472892 OR10AG1Q8NH19 301 aa10.08□□□□□ -0.8
VTI1A-203ENST00000472892 BAALCQ8WXS3 180 aa10.08□□□□□ -0.8
VTI1A-203ENST00000472892 DNAJC30Q96LL9 226 aa10.08□□□□□ -0.8
VTI1A-203ENST00000472892 KLK12Q9UKR0 248 aa10.08□□□□□ -0.8
VTI1A-203ENST00000472892 GHRHP01286 108 aa10.07□□□□□ -0.8
VTI1A-203ENST00000472892 EIF5AP63241 154 aaKnown RBP10.07□□□□□ -0.8
VTI1A-203ENST00000472892 ELOBQ15370 118 aa10.07□□□□□ -0.8
VTI1A-203ENST00000472892 Q6ZSA8 131 aa10.07□□□□□ -0.8
VTI1A-203ENST00000472892 A0A087WX48 190 aa10.06□□□□□ -0.8
VTI1A-203ENST00000472892 OR5AL1P0C617 328 aa10.06□□□□□ -0.8
VTI1A-203ENST00000472892 ATRAIDQ6UW56 229 aa10.06□□□□□ -0.8
VTI1A-203ENST00000472892 Q8N976 141 aa10.06□□□□□ -0.8
VTI1A-203ENST00000472892 NEXN-AS1Q8NBZ9 246 aa10.06□□□□□ -0.8
VTI1A-203ENST00000472892 MYCBP2O75592 4640 aa10.05□□□□□ -0.8
VTI1A-203ENST00000472892 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-203ENST00000472892 IGKV2D-24A0A075B6R9 120 aa10.05□□□□□ -0.8
VTI1A-203ENST00000472892 TRBV6-8A0A0A6YYG3 113 aa10.05□□□□□ -0.8
VTI1A-203ENST00000472892 CCL20P78556 96 aa10.05□□□□□ -0.8
VTI1A-203ENST00000472892 KCNIP4Q6PIL6 250 aa10.05□□□□□ -0.8
VTI1A-203ENST00000472892 UBE2WQ96B02 151 aa10.05□□□□□ -0.8
VTI1A-203ENST00000472892 TRAV1-1A0A0B4J248 108 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms