RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 A0A1W2PPV4 95 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 RBFOX3A6NFN3 312 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 LYRM1O43325 122 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 IGLV2-8P01709 118 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 CRPP02741 224 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 SMR3BP02814 79 aaPredicted RBP2.32□□□□□ -2.04
XRN1-209ENST00000472625 SFTA3P0C7M3 94 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 IL7P13232 177 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 S100A4P26447 101 aaKnown RBP2.32□□□□□ -2.04
XRN1-209ENST00000472625 RANP62826 216 aaKnown RBP2.32□□□□□ -2.04
XRN1-209ENST00000472625 RPL24P83731 157 aaKnown RBP2.32□□□□□ -2.04
XRN1-209ENST00000472625 Q0VG73 95 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 SAPCD1Q5SSQ6 148 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 PRR9Q5T870 116 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 LINC00299Q6ZSB3 139 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 SLC25A29Q8N8R3 303 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 C5orf17Q8NAS9 161 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 Q8TAT8 98 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 THAP6Q8TBB0 222 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 SCGB1C1Q8TD33 95 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 FXYD5Q96DB9 178 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 PHYHIPLQ96FC7 376 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 CHAC1Q9BUX1 264 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 NMES1Q9C002 83 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 WDR61Q9GZS3 305 aaKnown RBP2.32□□□□□ -2.04
XRN1-209ENST00000472625 TREM1Q9NP99 234 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 OR5AC2Q9NZP5 309 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 TRAV6A0A075B6T7 132 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 TRBV10-1A0A0K0K1A3 114 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 IGSF23A1L1A6 192 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 PGPA6NDG6 321 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 FAM24AA6NFZ4 105 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 CCSO14618 274 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 IGHV3-30P01768 117 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 IGHV3-33P01772 117 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 MBP02144 154 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 TCRBP04435 133 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 TYMSP04818 313 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 IGHV3-30-3P0DP02 117 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 IGHV3-30-5P0DP03 117 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 BTCP35070 178 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 SMUG1Q53HV7 270 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 TMEM97Q5BJF2 176 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 CFAP126Q5VTH2 177 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 MIR17HGQ75NE6 70 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 CYB561D1Q8N8Q1 229 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 ENKURQ8TC29 256 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 FAM167A-AS1Q96KT0 104 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 HYLS1Q96M11 299 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 TCEAL7Q9BRU2 100 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 NKX6-2Q9C056 277 aaPredicted RBP2.31□□□□□ -2.04
XRN1-209ENST00000472625 TMEM167BQ9NRX6 74 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 NDUFA13Q9P0J0 144 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 FLVCR2Q9UPI3 526 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 PKIGQ9Y2B9 76 aa2.31□□□□□ -2.04
XRN1-209ENST00000472625 LRP1Q07954 4544 aaKnown RBP2.31□□□□□ -2.04
XRN1-209ENST00000472625 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.3□□□□□ -2.04
XRN1-209ENST00000472625 IGKV2D-24A0A075B6R9 120 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 A0A0D9SG52 128 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 GCGP01275 180 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 PRB4P10163 310 aaPredicted RBP2.3□□□□□ -2.04
XRN1-209ENST00000472625 ASIPP42127 132 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 GCSAMLQ5JQS6 135 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 ZNF506Q5JVG8 444 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 GOLT1AQ6ZVE7 132 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 SCXQ7RTU7 201 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 NOTCH2NLQ7Z3S9 236 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 TMEM75Q8N9X5 138 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 OR11H4Q8NGC9 324 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 S100ZQ8WXG8 99 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 C11orf1Q9H5F2 150 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 IL36BQ9NZH7 164 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 MBD2Q9UBB5 411 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 RPH3ALQ9UNE2 315 aa2.3□□□□□ -2.04
XRN1-209ENST00000472625 FLG2Q5D862 2391 aaPredicted RBP2.3□□□□□ -2.04
XRN1-209ENST00000472625 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.29□□□□□ -2.04
XRN1-209ENST00000472625 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 F6UZH7 168 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 SSNA1O43805 119 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 CXorf1O96002 111 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 TCRAP04437 139 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 LINC00694P0DN24 101 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 FUSP35637 526 aaKnown RBP eCLIP2.29□□□□□ -2.04
XRN1-209ENST00000472625 CDC34P49427 236 aaPredicted RBP2.29□□□□□ -2.04
XRN1-209ENST00000472625 DEFA1P59665 94 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 DEFA3P59666 94 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 RPL37AP61513 92 aaKnown RBP2.29□□□□□ -2.04
XRN1-209ENST00000472625 HAMPP81172 84 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 RPL19P84098 196 aaKnown RBP2.29□□□□□ -2.04
XRN1-209ENST00000472625 SERF2P84101 59 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 FLI1Q01543 452 aaPredicted RBP2.29□□□□□ -2.04
XRN1-209ENST00000472625 IL15RAQ13261 267 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 MIAQ16674 131 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 LGALSLQ3ZCW2 172 aaPredicted RBP2.29□□□□□ -2.04
XRN1-209ENST00000472625 LRRC37A5PQ49AS3 106 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 ATRAIDQ6UW56 229 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 NIT1Q86X76 327 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 ZFP82Q8N141 532 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 OR10G7Q8NGN6 311 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 OR2G3Q8NGZ4 309 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms