RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 ESDP10768 282 aa8.64□□□□□ -1.03
LINC00880-201ENST00000471357 LINC00315P59091 139 aa8.64□□□□□ -1.03
LINC00880-201ENST00000471357 IL17DQ8TAD2 202 aa8.64□□□□□ -1.03
LINC00880-201ENST00000471357 C16orf74Q96GX8 76 aa8.64□□□□□ -1.03
LINC00880-201ENST00000471357 LAMTOR2Q9Y2Q5 125 aa8.64□□□□□ -1.03
LINC00880-201ENST00000471357 TRAV26-2A0A0B4J265 109 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 IFITM10A6NMD0 228 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 NPYP01303 97 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 CRYGDP07320 174 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 SAMD5Q5TGI4 173 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 NIT1Q86X76 327 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 LURAP1LQ8IV03 231 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 POM121L12Q8N7R1 296 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 GATA1P15976 413 aaPredicted RBP8.63□□□□□ -1.03
LINC00880-201ENST00000471357 FAM74A4Q5TZK3 123 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 SAMD10Q9BYL1 202 aa8.63□□□□□ -1.03
LINC00880-201ENST00000471357 MRPL16Q9NX20 251 aaKnown RBP8.63□□□□□ -1.03
LINC00880-201ENST00000471357 A8MWV9 139 aa8.62□□□□□ -1.03
LINC00880-201ENST00000471357 TNFRSF6BO95407 300 aa8.62□□□□□ -1.03
LINC00880-201ENST00000471357 RASL10AQ92737 203 aa8.62□□□□□ -1.03
LINC00880-201ENST00000471357 URB1-AS1Q96HZ7 61 aa8.62□□□□□ -1.03
LINC00880-201ENST00000471357 NDUFAF3Q9BU61 184 aa8.62□□□□□ -1.03
LINC00880-201ENST00000471357 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 F5H697 171 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 LINC00614P0C842 121 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 FABP4P15090 132 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 AKR1D1P51857 326 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 DAZ2Q13117 558 aaKnown RBP8.61□□□□□ -1.03
LINC00880-201ENST00000471357 RNASEKQ6P5S7 137 aaKnown RBP8.61□□□□□ -1.03
LINC00880-201ENST00000471357 NRACQ8N912 160 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 PRSS3P2Q8NHM4 247 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 TMEM18Q96B42 140 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 HIST1H2BLQ99880 126 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 PLAC8L1A1L4L8 177 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 SMIM9A6NGZ8 99 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 A8MZ25 164 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
LINC00880-201ENST00000471357 CHCHD1Q96BP2 118 aaKnown RBP8.61□□□□□ -1.03
LINC00880-201ENST00000471357 NOP10Q9NPE3 64 aaKnown RBP8.61□□□□□ -1.03
LINC00880-201ENST00000471357 TRGV1A0A0A0MS02 117 aa8.6□□□□□ -1.03
LINC00880-201ENST00000471357 HSBP1O75506 76 aa8.6□□□□□ -1.03
LINC00880-201ENST00000471357 IFI27P40305 119 aaPredicted RBP8.6□□□□□ -1.03
LINC00880-201ENST00000471357 ZNF56Q15929 161 aa8.6□□□□□ -1.03
LINC00880-201ENST00000471357 LGALS9BQ3B8N2 356 aa8.6□□□□□ -1.03
LINC00880-201ENST00000471357 SUMO4Q6EEV6 95 aa8.6□□□□□ -1.03
LINC00880-201ENST00000471357 X6R8D5 127 aa8.6□□□□□ -1.03
LINC00880-201ENST00000471357 RS1O15537 224 aa8.59□□□□□ -1.03
LINC00880-201ENST00000471357 CFAP126Q5VTH2 177 aa8.59□□□□□ -1.03
LINC00880-201ENST00000471357 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
LINC00880-201ENST00000471357 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.03
LINC00880-201ENST00000471357 PRSS47A8MTI9 375 aa8.59□□□□□ -1.03
LINC00880-201ENST00000471357 PPP1R17O96001 155 aa8.59□□□□□ -1.03
LINC00880-201ENST00000471357 PMCHP20382 165 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 AMTP48728 403 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 Q6ZTI0 123 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 Q6ZWC4 215 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 FAM19A2Q8N3H0 131 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 OR10D4PQ8NGN7 298 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 RPL39LQ96EH5 51 aaKnown RBP8.58□□□□□ -1.04
LINC00880-201ENST00000471357 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
LINC00880-201ENST00000471357 AP5S1Q9NUS5 200 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 DNAH3Q8TD57 4116 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 PKD1L1Q8TDX9 2849 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 IGHV3-73A0A0B4J1V6 119 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 RHODO00212 210 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 RNF183Q96D59 192 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 C20orf78Q9BR46 151 aa8.58□□□□□ -1.04
LINC00880-201ENST00000471357 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
LINC00880-201ENST00000471357 M0QY20 66 aa8.57□□□□□ -1.04
LINC00880-201ENST00000471357 EMP1P54849 157 aa8.57□□□□□ -1.04
LINC00880-201ENST00000471357 Q8N8P6 123 aa8.57□□□□□ -1.04
LINC00880-201ENST00000471357 OR4C5Q8NGB2 326 aa8.57□□□□□ -1.04
LINC00880-201ENST00000471357 SUMO2P61956 95 aaKnown RBP8.56□□□□□ -1.04
LINC00880-201ENST00000471357 ZFP2Q6ZN57 461 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 IGLV2-18A0A075B6J9 118 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 GAGE12BA1L429 117 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 H7C1H1 209 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 GAGE7O76087 117 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 GAGE12FP0CL80 117 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 GAGE12GP0CL81 117 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 GAGE12IP0CL82 117 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 EDA2RQ9HAV5 297 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 ST20Q9HBF5 79 aa8.56□□□□□ -1.04
LINC00880-201ENST00000471357 TRAV4A0A0B4J268 109 aa8.55□□□□□ -1.04
LINC00880-201ENST00000471357 IGHV1-24A0A0C4DH33 117 aa8.55□□□□□ -1.04
LINC00880-201ENST00000471357 RIPPLY3P57055 190 aa8.55□□□□□ -1.04
LINC00880-201ENST00000471357 PMCHL1Q16048 86 aa8.55□□□□□ -1.04
LINC00880-201ENST00000471357 ZNF479Q96JC4 524 aa8.55□□□□□ -1.04
LINC00880-201ENST00000471357 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
LINC00880-201ENST00000471357 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
LINC00880-201ENST00000471357 NACAE9PAV3 2078 aa8.55□□□□□ -1.04
LINC00880-201ENST00000471357 TRGV2A0A075B6R0 118 aa8.54□□□□□ -1.04
LINC00880-201ENST00000471357 TRBV6-5A0A0K0K1A5 114 aa8.54□□□□□ -1.04
LINC00880-201ENST00000471357 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
LINC00880-201ENST00000471357 MIFP14174 115 aa8.54□□□□□ -1.04
LINC00880-201ENST00000471357 IGHV4-28A0A0C4DH34 117 aa8.54□□□□□ -1.04
LINC00880-201ENST00000471357 IGHV3-53P01767 116 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms